RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
SCN8A-206ENST00000550891 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
SCN8A-206ENST00000550891 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
SCN8A-206ENST00000550891 Q5XG85 94 aa8.99□□□□□ -0.97
SCN8A-206ENST00000550891 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
SCN8A-206ENST00000550891 SPINK1P00995 79 aa8.98□□□□□ -0.97
SCN8A-206ENST00000550891 ATP5EP56381 51 aaPredicted RBP8.97□□□□□ -0.97
SCN8A-206ENST00000550891 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
SCN8A-206ENST00000550891 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
SCN8A-206ENST00000550891 C8orf87E5RJ46 101 aa8.96□□□□□ -0.97
SCN8A-206ENST00000550891 H3BPC8 53 aa8.96□□□□□ -0.98
SCN8A-206ENST00000550891 C1orf195Q5TG92 126 aa8.96□□□□□ -0.98
SCN8A-206ENST00000550891 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
SCN8A-206ENST00000550891 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
SCN8A-206ENST00000550891 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
SCN8A-206ENST00000550891 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
SCN8A-206ENST00000550891 LINC00313P59037 77 aa8.93□□□□□ -0.98
SCN8A-206ENST00000550891 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
SCN8A-206ENST00000550891 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
SCN8A-206ENST00000550891 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
SCN8A-206ENST00000550891 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
SCN8A-206ENST00000550891 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.99
SCN8A-206ENST00000550891 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
SCN8A-206ENST00000550891 RYR2Q92736 4967 aa8.89□□□□□ -0.99
SCN8A-206ENST00000550891 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
SCN8A-206ENST00000550891 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
SCN8A-206ENST00000550891 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
SCN8A-206ENST00000550891 PRR4Q16378 134 aa8.81□□□□□ -1
SCN8A-206ENST00000550891 Q5VSD8 79 aa8.79□□□□□ -1
SCN8A-206ENST00000550891 PCOTHQ58A44 107 aa8.78□□□□□ -1
SCN8A-206ENST00000550891 OXTP01178 125 aa8.76□□□□□ -1.01
SCN8A-206ENST00000550891 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
SCN8A-206ENST00000550891 LOC101927531A0A1B0GV80 90 aa8.76□□□□□ -1.01
SCN8A-206ENST00000550891 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
SCN8A-206ENST00000550891 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
SCN8A-206ENST00000550891 FAT1Q14517 4588 aa8.75□□□□□ -1.01
SCN8A-206ENST00000550891 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
SCN8A-206ENST00000550891 Q5W150 140 aa8.73□□□□□ -1.01
SCN8A-206ENST00000550891 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
SCN8A-206ENST00000550891 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.01
SCN8A-206ENST00000550891 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
SCN8A-206ENST00000550891 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
SCN8A-206ENST00000550891 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.03
SCN8A-206ENST00000550891 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
SCN8A-206ENST00000550891 Q8N1X5 172 aa8.6□□□□□ -1.03
SCN8A-206ENST00000550891 IGKV2D-30A0A075B6S6 120 aa8.6□□□□□ -1.03
SCN8A-206ENST00000550891 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
SCN8A-206ENST00000550891 RYR3Q15413 4870 aa8.59□□□□□ -1.03
SCN8A-206ENST00000550891 MPLKIPQ8TAP9 179 aa8.59□□□□□ -1.03
SCN8A-206ENST00000550891 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
SCN8A-206ENST00000550891 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-206ENST00000550891 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-206ENST00000550891 COA5Q86WW8 74 aa8.54□□□□□ -1.04
SCN8A-206ENST00000550891 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
SCN8A-206ENST00000550891 HRES1P13985 223 aa8.53□□□□□ -1.04
SCN8A-206ENST00000550891 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
SCN8A-206ENST00000550891 HSPG2P98160 4391 aa8.5□□□□□ -1.05
SCN8A-206ENST00000550891 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
SCN8A-206ENST00000550891 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
SCN8A-206ENST00000550891 A8MUU9 505 aa8.49□□□□□ -1.05
SCN8A-206ENST00000550891 ACYP2P14621 99 aa8.49□□□□□ -1.05
SCN8A-206ENST00000550891 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
SCN8A-206ENST00000550891 V9GYY9 64 aa8.47□□□□□ -1.05
SCN8A-206ENST00000550891 RYR1P21817 5038 aa8.46□□□□□ -1.06
SCN8A-206ENST00000550891 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
SCN8A-206ENST00000550891 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
SCN8A-206ENST00000550891 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
SCN8A-206ENST00000550891 Q1T7F1 81 aa8.43□□□□□ -1.06
SCN8A-206ENST00000550891 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
SCN8A-206ENST00000550891 Q75L30 129 aa8.41□□□□□ -1.06
SCN8A-206ENST00000550891 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
SCN8A-206ENST00000550891 ATP11AUNQ6ZP68 121 aa8.38□□□□□ -1.07
SCN8A-206ENST00000550891 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
SCN8A-206ENST00000550891 PSPHP1O15172 72 aa8.37□□□□□ -1.07
SCN8A-206ENST00000550891 SPINK7P58062 85 aa8.34□□□□□ -1.08
SCN8A-206ENST00000550891 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
SCN8A-206ENST00000550891 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
SCN8A-206ENST00000550891 A8MUN3 132 aa8.3□□□□□ -1.08
SCN8A-206ENST00000550891 TNXBP22105 4242 aa8.29□□□□□ -1.08
SCN8A-206ENST00000550891 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SCN8A-206ENST00000550891 XP32Q5T750 250 aa8.27□□□□□ -1.09
SCN8A-206ENST00000550891 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
SCN8A-206ENST00000550891 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
SCN8A-206ENST00000550891 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
SCN8A-206ENST00000550891 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
SCN8A-206ENST00000550891 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
SCN8A-206ENST00000550891 J3QL48 77 aa8.22□□□□□ -1.09
SCN8A-206ENST00000550891 Q5VV11 94 aa8.2□□□□□ -1.1
SCN8A-206ENST00000550891 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
SCN8A-206ENST00000550891 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
SCN8A-206ENST00000550891 A6NED7 52 aa8.14□□□□□ -1.11
SCN8A-206ENST00000550891 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
SCN8A-206ENST00000550891 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SCN8A-206ENST00000550891 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
SCN8A-206ENST00000550891 SEC61GP60059 68 aa8.07□□□□□ -1.12
SCN8A-206ENST00000550891 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
SCN8A-206ENST00000550891 SVIPQ8NHG7 77 aa8.01□□□□□ -1.13
SCN8A-206ENST00000550891 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
SCN8A-206ENST00000550891 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
SCN8A-206ENST00000550891 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms