RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
GCN1-207ENST00000550471 JMJD7-PLA2G4BH0Y9G9 81 aa10.13□□□□□ -0.79
GCN1-207ENST00000550471 FAM236DA0A1B0GTK5 79 aa10.11□□□□□ -0.79
GCN1-207ENST00000550471 NDUFB1O75438 58 aa10.11□□□□□ -0.79
GCN1-207ENST00000550471 FAM236CP0DP71 79 aa10.11□□□□□ -0.79
GCN1-207ENST00000550471 PDE6GP18545 87 aa10.11□□□□□ -0.79
GCN1-207ENST00000550471 ATXN8Q156A1 80 aa10.11□□□□□ -0.79
GCN1-207ENST00000550471 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
GCN1-207ENST00000550471 Q6ZQT0 140 aa10.08□□□□□ -0.8
GCN1-207ENST00000550471 LYRM7Q5U5X0 104 aa10.07□□□□□ -0.8
GCN1-207ENST00000550471 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
GCN1-207ENST00000550471 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
GCN1-207ENST00000550471 LOC110117498A0A087WWA1 95 aa10.04□□□□□ -0.8
GCN1-207ENST00000550471 HRES1P13985 223 aa10.02□□□□□ -0.81
GCN1-207ENST00000550471 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
GCN1-207ENST00000550471 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
GCN1-207ENST00000550471 A8MWP4 228 aa9.98□□□□□ -0.81
GCN1-207ENST00000550471 SMIM6P0DI80 62 aa9.97□□□□□ -0.81
GCN1-207ENST00000550471 Q8N9P0 234 aaPredicted RBP9.97□□□□□ -0.81
GCN1-207ENST00000550471 SPINK7P58062 85 aa9.92□□□□□ -0.82
GCN1-207ENST00000550471 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
GCN1-207ENST00000550471 TSTD3H0UI37 97 aa9.9□□□□□ -0.82
GCN1-207ENST00000550471 NREPQ16612 68 aa9.9□□□□□ -0.82
GCN1-207ENST00000550471 NAA38Q9BRA0 125 aaKnown RBP9.89□□□□□ -0.83
GCN1-207ENST00000550471 C14orf132Q9NPU4 83 aa9.89□□□□□ -0.83
GCN1-207ENST00000550471 IGKV3D-7A0A0C4DH55 119 aa9.87□□□□□ -0.83
GCN1-207ENST00000550471 Q6ZVQ6 151 aa9.87□□□□□ -0.83
GCN1-207ENST00000550471 PRR15Q8IV56 129 aa9.86□□□□□ -0.83
GCN1-207ENST00000550471 MT2AP02795 61 aa9.84□□□□□ -0.83
GCN1-207ENST00000550471 H3BT86 120 aa9.83□□□□□ -0.84
GCN1-207ENST00000550471 TMEM254Q8TBM7 123 aa9.81□□□□□ -0.84
GCN1-207ENST00000550471 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
GCN1-207ENST00000550471 BATFQ16520 125 aa9.78□□□□□ -0.84
GCN1-207ENST00000550471 C9orf118A6NHY6 69 aa9.77□□□□□ -0.85
GCN1-207ENST00000550471 KRTAP10-10P60014 251 aa9.77□□□□□ -0.85
GCN1-207ENST00000550471 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
GCN1-207ENST00000550471 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
GCN1-207ENST00000550471 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
GCN1-207ENST00000550471 MT1FP04733 61 aa9.73□□□□□ -0.85
GCN1-207ENST00000550471 A0A1W2PPM0 123 aa9.72□□□□□ -0.85
GCN1-207ENST00000550471 BPY2O14599 106 aa9.7□□□□□ -0.86
GCN1-207ENST00000550471 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
GCN1-207ENST00000550471 NDUFS5O43920 106 aa9.68□□□□□ -0.86
GCN1-207ENST00000550471 K7EQZ3 153 aa9.67□□□□□ -0.86
GCN1-207ENST00000550471 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
GCN1-207ENST00000550471 USH2AO75445 5202 aa9.66□□□□□ -0.86
GCN1-207ENST00000550471 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
GCN1-207ENST00000550471 H1FX-AS1Q4G0G2 97 aa9.62□□□□□ -0.87
GCN1-207ENST00000550471 LCE2BO14633 110 aa9.61□□□□□ -0.87
GCN1-207ENST00000550471 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
GCN1-207ENST00000550471 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.59□□□□□ -0.87
GCN1-207ENST00000550471 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
GCN1-207ENST00000550471 SSPOA2VEC9 5147 aa9.57□□□□□ -0.88
GCN1-207ENST00000550471 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
GCN1-207ENST00000550471 LOC105371267A0A1B0GV96 52 aa9.55□□□□□ -0.88
GCN1-207ENST00000550471 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
GCN1-207ENST00000550471 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
GCN1-207ENST00000550471 CXCL6P80162 114 aa9.54□□□□□ -0.88
GCN1-207ENST00000550471 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
GCN1-207ENST00000550471 KRTAP9-7A8MTY7 169 aa9.52□□□□□ -0.89
GCN1-207ENST00000550471 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
GCN1-207ENST00000550471 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
GCN1-207ENST00000550471 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
GCN1-207ENST00000550471 Q5W150 140 aa9.48□□□□□ -0.89
GCN1-207ENST00000550471 Q8N9L7 120 aa9.45□□□□□ -0.9
GCN1-207ENST00000550471 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
GCN1-207ENST00000550471 FCGBPQ9Y6R7 5405 aaPredicted RBP9.42□□□□□ -0.9
GCN1-207ENST00000550471 KRTAP19-6Q3LI70 58 aa9.4□□□□□ -0.9
GCN1-207ENST00000550471 K7EP34 96 aa9.39□□□□□ -0.91
GCN1-207ENST00000550471 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
GCN1-207ENST00000550471 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
GCN1-207ENST00000550471 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
GCN1-207ENST00000550471 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
GCN1-207ENST00000550471 F8W1H4 67 aa9.3□□□□□ -0.92
GCN1-207ENST00000550471 CSAG1Q6PB30 78 aa9.24□□□□□ -0.93
GCN1-207ENST00000550471 S4R3F8 94 aa9.24□□□□□ -0.93
GCN1-207ENST00000550471 MACF1Q9UPN3 7388 aaKnown RBP9.23□□□□□ -0.93
GCN1-207ENST00000550471 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
GCN1-207ENST00000550471 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
GCN1-207ENST00000550471 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
GCN1-207ENST00000550471 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
GCN1-207ENST00000550471 SYNE2Q8WXH0 6885 aaKnown RBP9.18□□□□□ -0.94
GCN1-207ENST00000550471 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
GCN1-207ENST00000550471 KRTAP3-1Q9BYR8 98 aa9.17□□□□□ -0.94
GCN1-207ENST00000550471 ACYP1P07311 99 aa9.14□□□□□ -0.95
GCN1-207ENST00000550471 LCA10Q71F78 164 aa9.11□□□□□ -0.95
GCN1-207ENST00000550471 LOC101927531A0A1B0GV80 90 aa9.09□□□□□ -0.95
GCN1-207ENST00000550471 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
GCN1-207ENST00000550471 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
GCN1-207ENST00000550471 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
GCN1-207ENST00000550471 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
GCN1-207ENST00000550471 Q5VV11 94 aa9.03□□□□□ -0.96
GCN1-207ENST00000550471 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
GCN1-207ENST00000550471 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
GCN1-207ENST00000550471 ATOX1O00244 68 aa9.01□□□□□ -0.97
GCN1-207ENST00000550471 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
GCN1-207ENST00000550471 KRTAP6-3Q3LI67 103 aa9.01□□□□□ -0.97
GCN1-207ENST00000550471 UQCRQO14949 82 aa8.99□□□□□ -0.97
GCN1-207ENST00000550471 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
GCN1-207ENST00000550471 KRTAP19-8Q3LI54 63 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms