RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
GCN1-206ENST00000549815 SCGB1C2P0DMR2 95 aa6.66□□□□□ -1.34
GCN1-206ENST00000549815 MT1FP04733 61 aa6.65□□□□□ -1.34
GCN1-206ENST00000549815 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
GCN1-206ENST00000549815 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
GCN1-206ENST00000549815 BAALC-AS2P0C853 105 aa6.63□□□□□ -1.35
GCN1-206ENST00000549815 Q6ZQT0 140 aa6.63□□□□□ -1.35
GCN1-206ENST00000549815 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
GCN1-206ENST00000549815 C9JAW5 83 aa6.61□□□□□ -1.35
GCN1-206ENST00000549815 J3KT08 172 aa6.61□□□□□ -1.35
GCN1-206ENST00000549815 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
GCN1-206ENST00000549815 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
GCN1-206ENST00000549815 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
GCN1-206ENST00000549815 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
GCN1-206ENST00000549815 LCE2BO14633 110 aa6.6□□□□□ -1.35
GCN1-206ENST00000549815 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
GCN1-206ENST00000549815 SPINK7P58062 85 aa6.58□□□□□ -1.36
GCN1-206ENST00000549815 LOC110117498A0A087WWA1 95 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 A0A1B0GW54 56 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 A8MWP4 228 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 JMJD7-PLA2G4BH0Y9G9 81 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 ATXN8Q156A1 80 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
GCN1-206ENST00000549815 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
GCN1-206ENST00000549815 IGKV3D-7A0A0C4DH55 119 aa6.54□□□□□ -1.36
GCN1-206ENST00000549815 NDUFB1O75438 58 aa6.54□□□□□ -1.36
GCN1-206ENST00000549815 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
GCN1-206ENST00000549815 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
GCN1-206ENST00000549815 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
GCN1-206ENST00000549815 M0R143 59 aa6.51□□□□□ -1.37
GCN1-206ENST00000549815 PDE6GP18545 87 aa6.5□□□□□ -1.37
GCN1-206ENST00000549815 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
GCN1-206ENST00000549815 Q6ZVQ6 151 aa6.49□□□□□ -1.37
GCN1-206ENST00000549815 WFDC13Q8IUB5 93 aa6.48□□□□□ -1.37
GCN1-206ENST00000549815 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
GCN1-206ENST00000549815 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
GCN1-206ENST00000549815 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
GCN1-206ENST00000549815 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
GCN1-206ENST00000549815 NREPQ16612 68 aa6.44□□□□□ -1.38
GCN1-206ENST00000549815 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
GCN1-206ENST00000549815 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
GCN1-206ENST00000549815 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
GCN1-206ENST00000549815 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
GCN1-206ENST00000549815 K7EQZ3 153 aa6.4□□□□□ -1.38
GCN1-206ENST00000549815 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
GCN1-206ENST00000549815 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
GCN1-206ENST00000549815 H3BT86 120 aa6.37□□□□□ -1.39
GCN1-206ENST00000549815 BATFQ16520 125 aa6.35□□□□□ -1.39
GCN1-206ENST00000549815 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
GCN1-206ENST00000549815 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
GCN1-206ENST00000549815 Q5W150 140 aa6.34□□□□□ -1.39
GCN1-206ENST00000549815 TSTD3H0UI37 97 aa6.33□□□□□ -1.4
GCN1-206ENST00000549815 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
GCN1-206ENST00000549815 A0A1W2PPM0 123 aa6.32□□□□□ -1.4
GCN1-206ENST00000549815 NDUFS5O43920 106 aa6.32□□□□□ -1.4
GCN1-206ENST00000549815 BPY2O14599 106 aa6.31□□□□□ -1.4
GCN1-206ENST00000549815 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
GCN1-206ENST00000549815 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
GCN1-206ENST00000549815 IGKV2-30P06310 120 aa6.29□□□□□ -1.4
GCN1-206ENST00000549815 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
GCN1-206ENST00000549815 Q8N9L7 120 aa6.27□□□□□ -1.41
GCN1-206ENST00000549815 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
GCN1-206ENST00000549815 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
GCN1-206ENST00000549815 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
GCN1-206ENST00000549815 LOC105371267A0A1B0GV96 52 aa6.22□□□□□ -1.41
GCN1-206ENST00000549815 C4orf26Q17RF5 130 aa6.21□□□□□ -1.42
GCN1-206ENST00000549815 SPCS1Q9Y6A9 102 aa6.21□□□□□ -1.42
GCN1-206ENST00000549815 CXCL6P80162 114 aa6.2□□□□□ -1.42
GCN1-206ENST00000549815 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
GCN1-206ENST00000549815 PRO0461Q9UI25 63 aa6.17□□□□□ -1.42
GCN1-206ENST00000549815 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
GCN1-206ENST00000549815 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
GCN1-206ENST00000549815 C5orf47Q569G3 176 aa6.12□□□□□ -1.43
GCN1-206ENST00000549815 NEBP20929 6669 aa6.09□□□□□ -1.43
GCN1-206ENST00000549815 K7EP34 96 aa6.09□□□□□ -1.43
GCN1-206ENST00000549815 MT1BP07438 61 aa6.08□□□□□ -1.44
GCN1-206ENST00000549815 COL5A1-AS1Q5SY13 56 aa6.08□□□□□ -1.44
GCN1-206ENST00000549815 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
GCN1-206ENST00000549815 S4R3F8 94 aa6.08□□□□□ -1.44
GCN1-206ENST00000549815 LCA10Q71F78 164 aa6.07□□□□□ -1.44
GCN1-206ENST00000549815 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
GCN1-206ENST00000549815 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
GCN1-206ENST00000549815 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
GCN1-206ENST00000549815 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
GCN1-206ENST00000549815 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
GCN1-206ENST00000549815 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
GCN1-206ENST00000549815 TP53AIP1Q9HCN2 124 aa6.04□□□□□ -1.44
GCN1-206ENST00000549815 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
GCN1-206ENST00000549815 A6NN06 94 aa6□□□□□ -1.45
GCN1-206ENST00000549815 Q5VV11 94 aa6□□□□□ -1.45
GCN1-206ENST00000549815 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
GCN1-206ENST00000549815 F8W1H4 67 aa5.96□□□□□ -1.46
GCN1-206ENST00000549815 ETDBQ3ZM63 59 aa5.96□□□□□ -1.46
GCN1-206ENST00000549815 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
GCN1-206ENST00000549815 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
GCN1-206ENST00000549815 A0A087WVE0 104 aa5.95□□□□□ -1.46
GCN1-206ENST00000549815 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
GCN1-206ENST00000549815 TRAV22A0A0B4J277 110 aa5.9□□□□□ -1.46
GCN1-206ENST00000549815 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms