RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NEBP20929 6669 aa6.22□□□□□ -1.41
DDX54-206ENST00000549271 MT1FP04733 61 aa6.21□□□□□ -1.42
DDX54-206ENST00000549271 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.42
DDX54-206ENST00000549271 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
DDX54-206ENST00000549271 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.42
DDX54-206ENST00000549271 LINC00846Q9NV44 126 aa6.21□□□□□ -1.42
DDX54-206ENST00000549271 M0R143 59 aa6.2□□□□□ -1.42
DDX54-206ENST00000549271 NOTCH2NLQ7Z3S9 236 aa6.2□□□□□ -1.42
DDX54-206ENST00000549271 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
DDX54-206ENST00000549271 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
DDX54-206ENST00000549271 LINC00313P59037 77 aa6.19□□□□□ -1.42
DDX54-206ENST00000549271 DSCR8Q96T75 97 aa6.17□□□□□ -1.42
DDX54-206ENST00000549271 VPS25Q9BRG1 176 aa6.17□□□□□ -1.42
DDX54-206ENST00000549271 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
DDX54-206ENST00000549271 TRBV20-1A0A075B6N2 111 aa6.15□□□□□ -1.42
DDX54-206ENST00000549271 C9JAW5 83 aa6.15□□□□□ -1.42
DDX54-206ENST00000549271 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
DDX54-206ENST00000549271 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
DDX54-206ENST00000549271 Q6ZQT0 140 aa6.12□□□□□ -1.43
DDX54-206ENST00000549271 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
DDX54-206ENST00000549271 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
DDX54-206ENST00000549271 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
DDX54-206ENST00000549271 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
DDX54-206ENST00000549271 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
DDX54-206ENST00000549271 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
DDX54-206ENST00000549271 BATFQ16520 125 aa6.09□□□□□ -1.43
DDX54-206ENST00000549271 C21orf62-AS1Q17RA5 79 aa6.09□□□□□ -1.43
DDX54-206ENST00000549271 J3KT08 172 aa6.08□□□□□ -1.44
DDX54-206ENST00000549271 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
DDX54-206ENST00000549271 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
DDX54-206ENST00000549271 A0A1B0GW54 56 aa6.06□□□□□ -1.44
DDX54-206ENST00000549271 PDE6GP18545 87 aa6.06□□□□□ -1.44
DDX54-206ENST00000549271 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
DDX54-206ENST00000549271 C14orf132Q9NPU4 83 aa6.06□□□□□ -1.44
DDX54-206ENST00000549271 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
DDX54-206ENST00000549271 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
DDX54-206ENST00000549271 HRES1P13985 223 aa6.04□□□□□ -1.44
DDX54-206ENST00000549271 IGKV3D-7A0A0C4DH55 119 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 A8MWP4 228 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 NDUFB1O75438 58 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
DDX54-206ENST00000549271 A0A1W2PPM0 123 aa6.01□□□□□ -1.45
DDX54-206ENST00000549271 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
DDX54-206ENST00000549271 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
DDX54-206ENST00000549271 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
DDX54-206ENST00000549271 H3BT86 120 aa5.99□□□□□ -1.45
DDX54-206ENST00000549271 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
DDX54-206ENST00000549271 NREPQ16612 68 aa5.98□□□□□ -1.45
DDX54-206ENST00000549271 PRR15Q8IV56 129 aa5.97□□□□□ -1.45
DDX54-206ENST00000549271 SPINK7P58062 85 aa5.95□□□□□ -1.46
DDX54-206ENST00000549271 Q6ZVQ6 151 aa5.95□□□□□ -1.46
DDX54-206ENST00000549271 MMP24-AS1A0A0U1RRL7 71 aa5.93□□□□□ -1.46
DDX54-206ENST00000549271 PCP4L1A6NKN8 68 aa5.93□□□□□ -1.46
DDX54-206ENST00000549271 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
DDX54-206ENST00000549271 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
DDX54-206ENST00000549271 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
DDX54-206ENST00000549271 K7EQZ3 153 aa5.9□□□□□ -1.46
DDX54-206ENST00000549271 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
DDX54-206ENST00000549271 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
DDX54-206ENST00000549271 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
DDX54-206ENST00000549271 BPY2O14599 106 aa5.87□□□□□ -1.47
DDX54-206ENST00000549271 COL5A1-AS1Q5SY13 56 aa5.87□□□□□ -1.47
DDX54-206ENST00000549271 PRO0461Q9UI25 63 aa5.87□□□□□ -1.47
DDX54-206ENST00000549271 WFDC13Q8IUB5 93 aa5.84□□□□□ -1.47
DDX54-206ENST00000549271 K7EP34 96 aa5.83□□□□□ -1.48
DDX54-206ENST00000549271 Q8N9L7 120 aa5.83□□□□□ -1.48
DDX54-206ENST00000549271 NDUFS5O43920 106 aa5.82□□□□□ -1.48
DDX54-206ENST00000549271 Q5W150 140 aa5.82□□□□□ -1.48
DDX54-206ENST00000549271 KMT2DO14686 5537 aa5.81□□□□□ -1.48
DDX54-206ENST00000549271 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
DDX54-206ENST00000549271 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
DDX54-206ENST00000549271 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
DDX54-206ENST00000549271 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
DDX54-206ENST00000549271 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
DDX54-206ENST00000549271 UBL5Q9BZL1 73 aa5.76□□□□□ -1.49
DDX54-206ENST00000549271 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
DDX54-206ENST00000549271 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
DDX54-206ENST00000549271 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
DDX54-206ENST00000549271 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
DDX54-206ENST00000549271 GTF2H5Q6ZYL4 71 aa5.73□□□□□ -1.49
DDX54-206ENST00000549271 F8W1H4 67 aa5.72□□□□□ -1.49
DDX54-206ENST00000549271 CXCL6P80162 114 aa5.72□□□□□ -1.49
DDX54-206ENST00000549271 ETDBQ3ZM63 59 aa5.7□□□□□ -1.5
DDX54-206ENST00000549271 A6NN06 94 aa5.67□□□□□ -1.5
DDX54-206ENST00000549271 A0A1B0GV90 55 aa5.66□□□□□ -1.5
DDX54-206ENST00000549271 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
DDX54-206ENST00000549271 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
DDX54-206ENST00000549271 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
DDX54-206ENST00000549271 ACYP1P07311 99 aa5.56□□□□□ -1.52
DDX54-206ENST00000549271 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
DDX54-206ENST00000549271 MT1BP07438 61 aa5.55□□□□□ -1.52
DDX54-206ENST00000549271 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
DDX54-206ENST00000549271 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
DDX54-206ENST00000549271 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
DDX54-206ENST00000549271 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
DDX54-206ENST00000549271 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
DDX54-206ENST00000549271 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
DDX54-206ENST00000549271 S4R3F8 94 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms