RNA–Protein interactions for RNA: ENST00000549207.1

RRN3P3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 3, humanhuman

BASIC

Gene RRN3P3, Length 578 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P3-201ENST00000549207 MKI67P46013 3256 aaKnown RBP0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 SPEGQ15772 3267 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 USP34Q70CQ2 3546 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA5O15230 3695 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 WDR87Q6ZQQ6 2873 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 MUC3AQ02505 3323 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 AKAP13Q12802 2813 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 KMT2AQ03164 3969 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PRUNE2Q8WUY3 3088 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 COL12A1Q99715 3063 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PDZD2O15018 2839 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 APCP25054 2843 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 SMG1Q96Q15 3661 aaKnown RBP0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 DEFB124Q8NES8 71 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 WDFY4Q6ZS81 3184 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PCNTO95613 3336 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 MAP1AP78559 2803 aaPredicted RBP0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 CMYA5Q8N3K9 4069 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 VPS13BQ7Z7G8 4022 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SACSQ9NZJ4 4579 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ANK2Q01484 3957 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PRKDCP78527 4128 aaKnown RBP0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 FREM2Q5SZK8 3169 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA3Q16787 3333 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 NOTCH1P46531 2555 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SETD2Q9BYW2 2564 aaPredicted RBP0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ZDBF2Q9HCK1 2354 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 A0A0D9SG42 100 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 APELAP0DMC3 54 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PRO0255Q9UI72 69 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 BRCA2P51587 3418 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ITPR3Q14573 2671 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PKHD1L1Q86WI1 4243 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DCHS1Q96JQ0 3298 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTBN2O15020 2390 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ASPMQ8IZT6 3477 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 KALRNO60229 2985 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 TENM4Q6N022 2769 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTA1P02549 2419 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 H3BNG1 76 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 DEFB110Q30KQ9 67 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 Q9Y3F1 56 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 EP400Q96L91 3159 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 F8P00451 2351 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ROS1P08922 2347 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 AKAP6Q13023 2319 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ACACAQ13085 2346 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ITPR1Q14643 2758 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 XIRP2A4UGR9 3374 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 C5orf42Q9H799 3197 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ANK3Q12955 4377 aaKnown RBP0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 LOC400499M0QZD8 3231 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 FBN2P35556 2912 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 SRRM2Q9UQ35 2752 aaKnown RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 TNXBP22105 4242 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 DYNC2H1Q8NCM8 4307 aaKnown RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 UNC80Q8N2C7 3258 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 PKDREJQ9NTG1 2253 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 KRTAP8-1Q8IUC2 63 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 SMR3AQ99954 134 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 LYSTQ99698 3801 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 APC2O95996 2303 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 USP9YO00507 2555 aaPredicted RBP0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CSMD1Q96PZ7 3565 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 RPS29P62273 56 aaKnown RBP0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 TACC2O95359 2948 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CACNA1HO95180 2353 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 HIVEP3Q5T1R4 2406 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 GVINP1Q7Z2Y8 2422 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 NCOR2Q9Y618 2525 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH6Q9C0G6 4158 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA1P25391 3075 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH2Q9P225 4427 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 SPINK1P00995 79 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH10Q8IVF4 4471 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 MYO15AQ9UKN7 3530 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 FLNCQ14315 2725 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HSPG2P98160 4391 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HUWE1Q7Z6Z7 4374 aaKnown RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 NCOR1O75376 2440 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms