RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ETDCA0A1B0GVM5 59 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 BPY2O14599 106 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 HTN1P15515 57 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
SCAF11-212ENST00000549162 PHF5AQ7RTV0 110 aaKnown RBP2.71□□□□□ -1.98
SCAF11-212ENST00000549162 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 UQCRQO14949 82 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 HIGD2BQ4VC39 106 aa2.71□□□□□ -1.98
SCAF11-212ENST00000549162 C9JAW5 83 aa2.7□□□□□ -1.98
SCAF11-212ENST00000549162 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
SCAF11-212ENST00000549162 TENM3Q9P273 2699 aa2.7□□□□□ -1.98
SCAF11-212ENST00000549162 NAA38Q9BRA0 125 aaKnown RBP2.7□□□□□ -1.98
SCAF11-212ENST00000549162 IGKV2D-30A0A075B6S6 120 aa2.69□□□□□ -1.98
SCAF11-212ENST00000549162 NDUFC1O43677 76 aa2.69□□□□□ -1.98
SCAF11-212ENST00000549162 NCR3O14931 201 aa2.69□□□□□ -1.98
SCAF11-212ENST00000549162 LECT2O14960 151 aa2.69□□□□□ -1.98
SCAF11-212ENST00000549162 JMJD1CQ15652 2540 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 Q6ZQY7 126 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 ATRQ13535 2644 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 CSPG4Q6UVK1 2322 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 TGP01266 2768 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
SCAF11-212ENST00000549162 CCDC168Q8NDH2 2452 aa2.67□□□□□ -1.98
SCAF11-212ENST00000549162 ATOX1O00244 68 aa2.67□□□□□ -1.98
SCAF11-212ENST00000549162 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
SCAF11-212ENST00000549162 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
SCAF11-212ENST00000549162 HIGD2AQ9BW72 106 aa2.66□□□□□ -1.98
SCAF11-212ENST00000549162 DSCR8Q96T75 97 aa2.66□□□□□ -1.98
SCAF11-212ENST00000549162 SORL1Q92673 2214 aa2.66□□□□□ -1.98
SCAF11-212ENST00000549162 NBEAL1Q6ZS30 2694 aa2.66□□□□□ -1.98
SCAF11-212ENST00000549162 HTN3P15516 51 aa2.66□□□□□ -1.98
SCAF11-212ENST00000549162 TRAV7A0A075B6U4 112 aa2.65□□□□□ -1.98
SCAF11-212ENST00000549162 A6NED7 52 aa2.65□□□□□ -1.98
SCAF11-212ENST00000549162 H7C2G1 150 aa2.65□□□□□ -1.98
SCAF11-212ENST00000549162 HCG22E2RYF7 251 aa2.65□□□□□ -1.99
SCAF11-212ENST00000549162 DNAL4O96015 105 aa2.65□□□□□ -1.99
SCAF11-212ENST00000549162 PRB2P02812 416 aaPredicted RBP2.65□□□□□ -1.99
SCAF11-212ENST00000549162 PRB4P10163 310 aaPredicted RBP2.65□□□□□ -1.99
SCAF11-212ENST00000549162 FUSP35637 526 aaKnown RBP eCLIP2.65□□□□□ -1.99
SCAF11-212ENST00000549162 LCA10Q71F78 164 aa2.65□□□□□ -1.99
SCAF11-212ENST00000549162 LINC00846Q9NV44 126 aa2.65□□□□□ -1.99
SCAF11-212ENST00000549162 LY6G6CO95867 125 aa2.65□□□□□ -1.99
SCAF11-212ENST00000549162 RP1L1Q8IWN7 2480 aaPredicted RBP2.64□□□□□ -1.99
SCAF11-212ENST00000549162 K7ERS5 55 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 Q5VSD8 79 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 STAB1Q9NY15 2570 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 ST20-AS1Q8NBB2 130 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 TOMM7Q9P0U1 55 aa2.63□□□□□ -1.99
SCAF11-212ENST00000549162 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
SCAF11-212ENST00000549162 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
SCAF11-212ENST00000549162 EPPK1P58107 5090 aaKnown RBP2.62□□□□□ -1.99
SCAF11-212ENST00000549162 UBL5Q9BZL1 73 aa2.61□□□□□ -1.99
SCAF11-212ENST00000549162 KRTAP9-6A0A140TA67 174 aa2.61□□□□□ -1.99
SCAF11-212ENST00000549162 LOC101927531A0A1B0GV80 90 aa2.61□□□□□ -1.99
SCAF11-212ENST00000549162 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
SCAF11-212ENST00000549162 IGKV3D-7A0A0C4DH55 119 aa2.61□□□□□ -1.99
SCAF11-212ENST00000549162 K7EQZ3 153 aa2.6□□□□□ -1.99
SCAF11-212ENST00000549162 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
SCAF11-212ENST00000549162 F8WEM9 126 aa2.6□□□□□ -1.99
SCAF11-212ENST00000549162 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
SCAF11-212ENST00000549162 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
SCAF11-212ENST00000549162 NOTCH3Q9UM47 2321 aa2.59□□□□□ -1.99
SCAF11-212ENST00000549162 HRES1P13985 223 aa2.59□□□□□ -1.99
SCAF11-212ENST00000549162 C3orf22Q8N5N4 141 aa2.59□□□□□ -1.99
SCAF11-212ENST00000549162 MRPL34Q9BQ48 92 aaKnown RBP2.59□□□□□ -1.99
SCAF11-212ENST00000549162 DEFB116Q30KQ4 102 aa2.59□□□□□ -2
SCAF11-212ENST00000549162 SERP2Q8N6R1 65 aa2.59□□□□□ -2
SCAF11-212ENST00000549162 TENM2Q9NT68 2774 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 hDV103S1A0JD37 113 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 NDUFB1O75438 58 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 COX7CP15954 63 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 DMAC1Q96GE9 116 aa2.58□□□□□ -2
SCAF11-212ENST00000549162 ETDBQ3ZM63 59 aa2.57□□□□□ -2
SCAF11-212ENST00000549162 SONP18583 2426 aaKnown RBP2.57□□□□□ -2
SCAF11-212ENST00000549162 NBEAL2Q6ZNJ1 2754 aa2.56□□□□□ -2
SCAF11-212ENST00000549162 UBE2BP63146 152 aa2.56□□□□□ -2
SCAF11-212ENST00000549162 PRLHP81277 87 aa2.56□□□□□ -2
SCAF11-212ENST00000549162 Q5W150 140 aa2.56□□□□□ -2
SCAF11-212ENST00000549162 NOTCH1P46531 2555 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 FAM236AA0A1B0GUQ0 79 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 FAM236BA0A1B0GV22 79 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 C14orf132Q9NPU4 83 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 ANAPC11Q9NYG5 84 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 CRIPTQ9P021 101 aa2.55□□□□□ -2
SCAF11-212ENST00000549162 TMEM258P61165 79 aa2.54□□□□□ -2
SCAF11-212ENST00000549162 A6NN06 94 aa2.54□□□□□ -2
SCAF11-212ENST00000549162 ACANP16112 2415 aa2.54□□□□□ -2
SCAF11-212ENST00000549162 TRAV22A0A0B4J277 110 aa2.53□□□□□ -2
SCAF11-212ENST00000549162 C1orf64Q8NEQ6 169 aa2.53□□□□□ -2
SCAF11-212ENST00000549162 NREPQ16612 68 aa2.53□□□□□ -2
SCAF11-212ENST00000549162 TLN2Q9Y4G6 2542 aa2.52□□□□□ -2.01
SCAF11-212ENST00000549162 LPAP08519 4548 aa2.52□□□□□ -2.01
SCAF11-212ENST00000549162 MT-ATP8P03928 68 aa2.5□□□□□ -2.01
SCAF11-212ENST00000549162 H7BZZ5 65 aa2.5□□□□□ -2.01
SCAF11-212ENST00000549162 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
SCAF11-212ENST00000549162 KRTAP19-1Q8IUB9 90 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms