RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 FBN3Q75N90 2809 aa7.11□□□□□ -1.27
RAPGEF3-219ENST00000549151 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
RAPGEF3-219ENST00000549151 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
RAPGEF3-219ENST00000549151 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
RAPGEF3-219ENST00000549151 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
RAPGEF3-219ENST00000549151 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
RAPGEF3-219ENST00000549151 SPTSSBQ8NFR3 76 aa7.09□□□□□ -1.27
RAPGEF3-219ENST00000549151 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
RAPGEF3-219ENST00000549151 PRKDCP78527 4128 aaKnown RBP7.09□□□□□ -1.27
RAPGEF3-219ENST00000549151 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
RAPGEF3-219ENST00000549151 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
RAPGEF3-219ENST00000549151 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.28
RAPGEF3-219ENST00000549151 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
RAPGEF3-219ENST00000549151 A6NED7 52 aa7.08□□□□□ -1.28
RAPGEF3-219ENST00000549151 RETNLBQ9BQ08 111 aa7.07□□□□□ -1.28
RAPGEF3-219ENST00000549151 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
RAPGEF3-219ENST00000549151 DNAH17Q9UFH2 4485 aa7.06□□□□□ -1.28
RAPGEF3-219ENST00000549151 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
RAPGEF3-219ENST00000549151 Q6ZR54 194 aa7.05□□□□□ -1.28
RAPGEF3-219ENST00000549151 LY6G6CO95867 125 aa7.05□□□□□ -1.28
RAPGEF3-219ENST00000549151 Q5W150 140 aa7.04□□□□□ -1.28
RAPGEF3-219ENST00000549151 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
RAPGEF3-219ENST00000549151 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
RAPGEF3-219ENST00000549151 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
RAPGEF3-219ENST00000549151 HRES1P13985 223 aa7.02□□□□□ -1.29
RAPGEF3-219ENST00000549151 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
RAPGEF3-219ENST00000549151 LCA10Q71F78 164 aa6.99□□□□□ -1.29
RAPGEF3-219ENST00000549151 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
RAPGEF3-219ENST00000549151 LOC101927531A0A1B0GV80 90 aa6.98□□□□□ -1.29
RAPGEF3-219ENST00000549151 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
RAPGEF3-219ENST00000549151 Q75L30 129 aa6.97□□□□□ -1.29
RAPGEF3-219ENST00000549151 KRTAP10-2P60368 255 aa6.96□□□□□ -1.3
RAPGEF3-219ENST00000549151 SPINK7P58062 85 aa6.93□□□□□ -1.3
RAPGEF3-219ENST00000549151 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
RAPGEF3-219ENST00000549151 LINC00313P59037 77 aa6.92□□□□□ -1.3
RAPGEF3-219ENST00000549151 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
RAPGEF3-219ENST00000549151 C8orf87E5RJ46 101 aa6.9□□□□□ -1.3
RAPGEF3-219ENST00000549151 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.3
RAPGEF3-219ENST00000549151 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
RAPGEF3-219ENST00000549151 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
RAPGEF3-219ENST00000549151 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 ACYP2P14621 99 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 ATP11AUNQ6ZP68 121 aa6.88□□□□□ -1.31
RAPGEF3-219ENST00000549151 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
RAPGEF3-219ENST00000549151 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
RAPGEF3-219ENST00000549151 KRTAP10-1P60331 282 aa6.85□□□□□ -1.31
RAPGEF3-219ENST00000549151 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
RAPGEF3-219ENST00000549151 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
RAPGEF3-219ENST00000549151 A6NN06 94 aa6.79□□□□□ -1.32
RAPGEF3-219ENST00000549151 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
RAPGEF3-219ENST00000549151 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
RAPGEF3-219ENST00000549151 A0A1B0GU69 56 aa6.77□□□□□ -1.33
RAPGEF3-219ENST00000549151 SPINK1P00995 79 aa6.75□□□□□ -1.33
RAPGEF3-219ENST00000549151 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
RAPGEF3-219ENST00000549151 TYMSOSQ8TAI1 123 aa6.75□□□□□ -1.33
RAPGEF3-219ENST00000549151 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
RAPGEF3-219ENST00000549151 VPS13BQ7Z7G8 4022 aa6.74□□□□□ -1.33
RAPGEF3-219ENST00000549151 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
RAPGEF3-219ENST00000549151 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
RAPGEF3-219ENST00000549151 Q6ZSA8 131 aa6.71□□□□□ -1.33
RAPGEF3-219ENST00000549151 Q8N1X5 172 aa6.7□□□□□ -1.34
RAPGEF3-219ENST00000549151 PKD1P98161 4303 aa6.7□□□□□ -1.34
RAPGEF3-219ENST00000549151 FAT2Q9NYQ8 4349 aa6.69□□□□□ -1.34
RAPGEF3-219ENST00000549151 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
RAPGEF3-219ENST00000549151 C9orf92A6NGG3 77 aa6.65□□□□□ -1.35
RAPGEF3-219ENST00000549151 PKHD1P08F94 4074 aa6.64□□□□□ -1.35
RAPGEF3-219ENST00000549151 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
RAPGEF3-219ENST00000549151 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
RAPGEF3-219ENST00000549151 LINC00304Q8N9R0 145 aa6.63□□□□□ -1.35
RAPGEF3-219ENST00000549151 UQCR11O14957 56 aa6.62□□□□□ -1.35
RAPGEF3-219ENST00000549151 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
RAPGEF3-219ENST00000549151 FAT1Q14517 4588 aa6.59□□□□□ -1.35
RAPGEF3-219ENST00000549151 KRTAP21-3Q3LHN1 58 aa6.58□□□□□ -1.36
RAPGEF3-219ENST00000549151 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
RAPGEF3-219ENST00000549151 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
RAPGEF3-219ENST00000549151 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
RAPGEF3-219ENST00000549151 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
RAPGEF3-219ENST00000549151 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
RAPGEF3-219ENST00000549151 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
RAPGEF3-219ENST00000549151 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
RAPGEF3-219ENST00000549151 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
RAPGEF3-219ENST00000549151 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
RAPGEF3-219ENST00000549151 A8MUU9 505 aa6.4□□□□□ -1.38
RAPGEF3-219ENST00000549151 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
RAPGEF3-219ENST00000549151 H0YAA0 97 aa6.39□□□□□ -1.39
RAPGEF3-219ENST00000549151 A0A1B0GU33 70 aa6.37□□□□□ -1.39
RAPGEF3-219ENST00000549151 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
RAPGEF3-219ENST00000549151 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
RAPGEF3-219ENST00000549151 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
RAPGEF3-219ENST00000549151 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
RAPGEF3-219ENST00000549151 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
RAPGEF3-219ENST00000549151 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
RAPGEF3-219ENST00000549151 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
RAPGEF3-219ENST00000549151 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
RAPGEF3-219ENST00000549151 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
RAPGEF3-219ENST00000549151 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
RAPGEF3-219ENST00000549151 HSPG2P98160 4391 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms