RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PRR26Q8N8Z3 221 aa11.62□□□□□ -0.55
CTDSP2-204ENST00000548823 J3KT08 172 aa11.61□□□□□ -0.55
CTDSP2-204ENST00000548823 SERP2Q8N6R1 65 aa11.61□□□□□ -0.55
CTDSP2-204ENST00000548823 COX7CP15954 63 aa11.6□□□□□ -0.55
CTDSP2-204ENST00000548823 Q8N9L7 120 aa11.6□□□□□ -0.55
CTDSP2-204ENST00000548823 UQCRQO14949 82 aa11.59□□□□□ -0.55
CTDSP2-204ENST00000548823 KRTAP1-4P0C5Y4 121 aa11.57□□□□□ -0.56
CTDSP2-204ENST00000548823 K7EQZ3 153 aa11.55□□□□□ -0.56
CTDSP2-204ENST00000548823 TRAV7A0A075B6U4 112 aa11.54□□□□□ -0.56
CTDSP2-204ENST00000548823 CCDC179H3BU77 68 aa11.54□□□□□ -0.56
CTDSP2-204ENST00000548823 CRCT1Q9UGL9 99 aa11.54□□□□□ -0.56
CTDSP2-204ENST00000548823 A8MWP4 228 aa11.53□□□□□ -0.56
CTDSP2-204ENST00000548823 KRTAP13-2Q52LG2 175 aa11.53□□□□□ -0.56
CTDSP2-204ENST00000548823 Q96NJ1 140 aa11.53□□□□□ -0.56
CTDSP2-204ENST00000548823 A0A087X002 238 aa11.52□□□□□ -0.57
CTDSP2-204ENST00000548823 DEFB116Q30KQ4 102 aa11.51□□□□□ -0.57
CTDSP2-204ENST00000548823 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
CTDSP2-204ENST00000548823 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
CTDSP2-204ENST00000548823 ASB16-AS1Q495Z4 193 aa11.5□□□□□ -0.57
CTDSP2-204ENST00000548823 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
CTDSP2-204ENST00000548823 FSIP2Q5CZC0 6907 aa11.49□□□□□ -0.57
CTDSP2-204ENST00000548823 HCG22E2RYF7 251 aa11.48□□□□□ -0.57
CTDSP2-204ENST00000548823 Q5XG85 94 aa11.47□□□□□ -0.57
CTDSP2-204ENST00000548823 NDUFB1O75438 58 aa11.46□□□□□ -0.57
CTDSP2-204ENST00000548823 OCR1Q9BZK8 76 aa11.43□□□□□ -0.58
CTDSP2-204ENST00000548823 TYMSOSQ8TAI1 123 aa11.38□□□□□ -0.59
CTDSP2-204ENST00000548823 A0A1B0GVX0 72 aa11.36□□□□□ -0.59
CTDSP2-204ENST00000548823 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
CTDSP2-204ENST00000548823 CASC2Q6XLA1 102 aa11.35□□□□□ -0.59
CTDSP2-204ENST00000548823 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
CTDSP2-204ENST00000548823 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
CTDSP2-204ENST00000548823 SPINK1P00995 79 aa11.32□□□□□ -0.6
CTDSP2-204ENST00000548823 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
CTDSP2-204ENST00000548823 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
CTDSP2-204ENST00000548823 MUC17Q685J3 4493 aa11.32□□□□□ -0.6
CTDSP2-204ENST00000548823 KLKP1Q107X0 134 aa11.31□□□□□ -0.6
CTDSP2-204ENST00000548823 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
CTDSP2-204ENST00000548823 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
CTDSP2-204ENST00000548823 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
CTDSP2-204ENST00000548823 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
CTDSP2-204ENST00000548823 C1orf195Q5TG92 126 aa11.27□□□□□ -0.61
CTDSP2-204ENST00000548823 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
CTDSP2-204ENST00000548823 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
CTDSP2-204ENST00000548823 C5orf47Q569G3 176 aa11.25□□□□□ -0.61
CTDSP2-204ENST00000548823 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
CTDSP2-204ENST00000548823 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
CTDSP2-204ENST00000548823 CYSTM1Q9H1C7 97 aa11.22□□□□□ -0.61
CTDSP2-204ENST00000548823 NDUFC1O43677 76 aa11.21□□□□□ -0.61
CTDSP2-204ENST00000548823 TPRXLQ17RH7 258 aa11.19□□□□□ -0.62
CTDSP2-204ENST00000548823 TP53AIP1Q9HCN2 124 aa11.19□□□□□ -0.62
CTDSP2-204ENST00000548823 TMEM258P61165 79 aa11.18□□□□□ -0.62
CTDSP2-204ENST00000548823 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
CTDSP2-204ENST00000548823 SNURFQ9Y675 71 aa11.16□□□□□ -0.62
CTDSP2-204ENST00000548823 H3BPC8 53 aa11.16□□□□□ -0.62
CTDSP2-204ENST00000548823 H7BZZ5 65 aa11.15□□□□□ -0.63
CTDSP2-204ENST00000548823 NOTCH2NLQ7Z3S9 236 aa11.15□□□□□ -0.63
CTDSP2-204ENST00000548823 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
CTDSP2-204ENST00000548823 MP68P56378 58 aa11.13□□□□□ -0.63
CTDSP2-204ENST00000548823 ZCCHC13Q8WW36 166 aaKnown RBP11.13□□□□□ -0.63
CTDSP2-204ENST00000548823 LINC00313P59037 77 aa11.12□□□□□ -0.63
CTDSP2-204ENST00000548823 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
CTDSP2-204ENST00000548823 H0Y9P7 68 aa11.07□□□□□ -0.64
CTDSP2-204ENST00000548823 TRAV22A0A0B4J277 110 aa11.06□□□□□ -0.64
CTDSP2-204ENST00000548823 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
CTDSP2-204ENST00000548823 NDUFS5O43920 106 aa11.03□□□□□ -0.64
CTDSP2-204ENST00000548823 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
CTDSP2-204ENST00000548823 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
CTDSP2-204ENST00000548823 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
CTDSP2-204ENST00000548823 FAM236DA0A1B0GTK5 79 aa11□□□□□ -0.65
CTDSP2-204ENST00000548823 FAM236CP0DP71 79 aa11□□□□□ -0.65
CTDSP2-204ENST00000548823 C1orf64Q8NEQ6 169 aa10.96□□□□□ -0.65
CTDSP2-204ENST00000548823 RPS28P62857 69 aaKnown RBP10.95□□□□□ -0.66
CTDSP2-204ENST00000548823 KRTAP4-1Q9BYQ7 146 aa10.95□□□□□ -0.66
CTDSP2-204ENST00000548823 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
CTDSP2-204ENST00000548823 KRTAP9-7A8MTY7 169 aa10.9□□□□□ -0.66
CTDSP2-204ENST00000548823 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
CTDSP2-204ENST00000548823 Q5W150 140 aa10.88□□□□□ -0.67
CTDSP2-204ENST00000548823 SPANXA2-OT1Q8N9U9 137 aa10.87□□□□□ -0.67
CTDSP2-204ENST00000548823 SEC61BP60468 96 aaKnown RBP10.85□□□□□ -0.67
CTDSP2-204ENST00000548823 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
CTDSP2-204ENST00000548823 SERP1Q9Y6X1 66 aa10.84□□□□□ -0.67
CTDSP2-204ENST00000548823 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
CTDSP2-204ENST00000548823 CYP4F30PQ9H0H9 118 aa10.82□□□□□ -0.68
CTDSP2-204ENST00000548823 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.78□□□□□ -0.68
CTDSP2-204ENST00000548823 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.68
CTDSP2-204ENST00000548823 A8MUU9 505 aa10.77□□□□□ -0.69
CTDSP2-204ENST00000548823 MT1HP80294 61 aa10.77□□□□□ -0.69
CTDSP2-204ENST00000548823 LORP23490 312 aaPredicted RBP10.74□□□□□ -0.69
CTDSP2-204ENST00000548823 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
CTDSP2-204ENST00000548823 KRTAP19-2Q3LHN2 52 aa10.72□□□□□ -0.69
CTDSP2-204ENST00000548823 C9orf92A6NGG3 77 aa10.7□□□□□ -0.7
CTDSP2-204ENST00000548823 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
CTDSP2-204ENST00000548823 KRTAP10-6P60371 365 aaPredicted RBP10.69□□□□□ -0.7
CTDSP2-204ENST00000548823 Q75L30 129 aa10.65□□□□□ -0.7
CTDSP2-204ENST00000548823 XP32Q5T750 250 aa10.6□□□□□ -0.71
CTDSP2-204ENST00000548823 SMIM26A0A096LP01 95 aa10.59□□□□□ -0.71
CTDSP2-204ENST00000548823 C7orf65Q6ZTY9 151 aa10.57□□□□□ -0.72
CTDSP2-204ENST00000548823 HRES1P13985 223 aa10.56□□□□□ -0.72
CTDSP2-204ENST00000548823 IGKV2D-30A0A075B6S6 120 aa10.55□□□□□ -0.72
CTDSP2-204ENST00000548823 M0R2T5 61 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms