RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
TMEM106C-208ENST00000548355 FAT1Q14517 4588 aa4.49□□□□□ -1.69
TMEM106C-208ENST00000548355 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
TMEM106C-208ENST00000548355 Q8N1X5 172 aa4.48□□□□□ -1.69
TMEM106C-208ENST00000548355 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
TMEM106C-208ENST00000548355 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
TMEM106C-208ENST00000548355 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
TMEM106C-208ENST00000548355 OCR1Q9BZK8 76 aa4.47□□□□□ -1.69
TMEM106C-208ENST00000548355 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
TMEM106C-208ENST00000548355 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
TMEM106C-208ENST00000548355 RYR1P21817 5038 aa4.45□□□□□ -1.7
TMEM106C-208ENST00000548355 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
TMEM106C-208ENST00000548355 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
TMEM106C-208ENST00000548355 HSPG2P98160 4391 aa4.44□□□□□ -1.7
TMEM106C-208ENST00000548355 KRTAP10-8P60410 259 aa4.43□□□□□ -1.7
TMEM106C-208ENST00000548355 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
TMEM106C-208ENST00000548355 MRPL34Q9BQ48 92 aaKnown RBP4.43□□□□□ -1.7
TMEM106C-208ENST00000548355 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
TMEM106C-208ENST00000548355 NDUFS5O43920 106 aa4.42□□□□□ -1.7
TMEM106C-208ENST00000548355 LINC00313P59037 77 aa4.42□□□□□ -1.7
TMEM106C-208ENST00000548355 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
TMEM106C-208ENST00000548355 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
TMEM106C-208ENST00000548355 TP53AIP1Q9HCN2 124 aa4.41□□□□□ -1.7
TMEM106C-208ENST00000548355 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
TMEM106C-208ENST00000548355 SNURFQ9Y675 71 aa4.4□□□□□ -1.71
TMEM106C-208ENST00000548355 KIAA1109Q2LD37 5005 aa4.4□□□□□ -1.71
TMEM106C-208ENST00000548355 MP68P56378 58 aa4.39□□□□□ -1.71
TMEM106C-208ENST00000548355 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
TMEM106C-208ENST00000548355 BIRC6Q9NR09 4857 aa4.39□□□□□ -1.71
TMEM106C-208ENST00000548355 A0A0U1RQV1 116 aa4.38□□□□□ -1.71
TMEM106C-208ENST00000548355 H0Y9P7 68 aa4.38□□□□□ -1.71
TMEM106C-208ENST00000548355 TRAV22A0A0B4J277 110 aa4.37□□□□□ -1.71
TMEM106C-208ENST00000548355 NDUFC1O43677 76 aa4.37□□□□□ -1.71
TMEM106C-208ENST00000548355 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
TMEM106C-208ENST00000548355 CYSTM1Q9H1C7 97 aa4.37□□□□□ -1.71
TMEM106C-208ENST00000548355 H3BPC8 53 aa4.36□□□□□ -1.71
TMEM106C-208ENST00000548355 OXTP01178 125 aa4.36□□□□□ -1.71
TMEM106C-208ENST00000548355 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
TMEM106C-208ENST00000548355 J3QL48 77 aa4.35□□□□□ -1.71
TMEM106C-208ENST00000548355 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
TMEM106C-208ENST00000548355 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
TMEM106C-208ENST00000548355 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
TMEM106C-208ENST00000548355 TMEM258P61165 79 aa4.34□□□□□ -1.71
TMEM106C-208ENST00000548355 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
TMEM106C-208ENST00000548355 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
TMEM106C-208ENST00000548355 H7BZZ5 65 aa4.33□□□□□ -1.72
TMEM106C-208ENST00000548355 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
TMEM106C-208ENST00000548355 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
TMEM106C-208ENST00000548355 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
TMEM106C-208ENST00000548355 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
TMEM106C-208ENST00000548355 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
TMEM106C-208ENST00000548355 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
TMEM106C-208ENST00000548355 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
TMEM106C-208ENST00000548355 Q5W150 140 aa4.3□□□□□ -1.72
TMEM106C-208ENST00000548355 TNXBP22105 4242 aa4.29□□□□□ -1.72
TMEM106C-208ENST00000548355 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
TMEM106C-208ENST00000548355 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
TMEM106C-208ENST00000548355 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
TMEM106C-208ENST00000548355 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
TMEM106C-208ENST00000548355 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
TMEM106C-208ENST00000548355 A8MUU9 505 aa4.27□□□□□ -1.73
TMEM106C-208ENST00000548355 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
TMEM106C-208ENST00000548355 PRR4Q16378 134 aa4.26□□□□□ -1.73
TMEM106C-208ENST00000548355 PCOTHQ58A44 107 aa4.25□□□□□ -1.73
TMEM106C-208ENST00000548355 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
TMEM106C-208ENST00000548355 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
TMEM106C-208ENST00000548355 Q75L30 129 aa4.24□□□□□ -1.73
TMEM106C-208ENST00000548355 SPANXA2-OT1Q8N9U9 137 aa4.24□□□□□ -1.73
TMEM106C-208ENST00000548355 CYP4F30PQ9H0H9 118 aa4.24□□□□□ -1.73
TMEM106C-208ENST00000548355 HERC2O95714 4834 aa4.23□□□□□ -1.73
TMEM106C-208ENST00000548355 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
TMEM106C-208ENST00000548355 SERP1Q9Y6X1 66 aa4.21□□□□□ -1.74
TMEM106C-208ENST00000548355 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
TMEM106C-208ENST00000548355 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
TMEM106C-208ENST00000548355 XP32Q5T750 250 aa4.2□□□□□ -1.74
TMEM106C-208ENST00000548355 ATP11AUNQ6ZP68 121 aa4.2□□□□□ -1.74
TMEM106C-208ENST00000548355 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
TMEM106C-208ENST00000548355 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
TMEM106C-208ENST00000548355 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
TMEM106C-208ENST00000548355 HRES1P13985 223 aa4.18□□□□□ -1.74
TMEM106C-208ENST00000548355 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
TMEM106C-208ENST00000548355 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
TMEM106C-208ENST00000548355 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
TMEM106C-208ENST00000548355 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
TMEM106C-208ENST00000548355 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
TMEM106C-208ENST00000548355 SPINK7P58062 85 aa4.15□□□□□ -1.75
TMEM106C-208ENST00000548355 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
TMEM106C-208ENST00000548355 ACYP2P14621 99 aa4.12□□□□□ -1.75
TMEM106C-208ENST00000548355 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
TMEM106C-208ENST00000548355 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
TMEM106C-208ENST00000548355 COA5Q86WW8 74 aa4.11□□□□□ -1.75
TMEM106C-208ENST00000548355 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
TMEM106C-208ENST00000548355 A8MUN3 132 aa4.08□□□□□ -1.76
TMEM106C-208ENST00000548355 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
TMEM106C-208ENST00000548355 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
TMEM106C-208ENST00000548355 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
TMEM106C-208ENST00000548355 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
TMEM106C-208ENST00000548355 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
TMEM106C-208ENST00000548355 LPAP08519 4548 aa4.02□□□□□ -1.77
TMEM106C-208ENST00000548355 Q1T7F1 81 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms