RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TRIAP1O43715 76 aa9.54□□□□□ -0.88
GATC-202ENST00000548171 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
GATC-202ENST00000548171 CEND1Q8N111 149 aa9.52□□□□□ -0.89
GATC-202ENST00000548171 S100A6P06703 90 aa9.51□□□□□ -0.89
GATC-202ENST00000548171 WFDC13Q8IUB5 93 aa9.51□□□□□ -0.89
GATC-202ENST00000548171 J3KT08 172 aa9.49□□□□□ -0.89
GATC-202ENST00000548171 C2orf91Q6ZV80 131 aa9.49□□□□□ -0.89
GATC-202ENST00000548171 UBE2V1Q13404 147 aa9.47□□□□□ -0.89
GATC-202ENST00000548171 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
GATC-202ENST00000548171 C21orf62-AS1Q17RA5 79 aa9.44□□□□□ -0.9
GATC-202ENST00000548171 PAM16Q9Y3D7 125 aa9.44□□□□□ -0.9
GATC-202ENST00000548171 FXYD2P54710 66 aa9.43□□□□□ -0.9
GATC-202ENST00000548171 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
GATC-202ENST00000548171 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
GATC-202ENST00000548171 NDUFB1O75438 58 aa9.42□□□□□ -0.9
GATC-202ENST00000548171 COX6CP09669 75 aa9.42□□□□□ -0.9
GATC-202ENST00000548171 PSMB2P49721 201 aa9.42□□□□□ -0.9
GATC-202ENST00000548171 RBM3P98179 157 aaKnown RBP9.4□□□□□ -0.9
GATC-202ENST00000548171 DSCR8Q96T75 97 aa9.4□□□□□ -0.9
GATC-202ENST00000548171 NEBP20929 6669 aa9.39□□□□□ -0.91
GATC-202ENST00000548171 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
GATC-202ENST00000548171 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
GATC-202ENST00000548171 S100A1P23297 94 aa9.34□□□□□ -0.91
GATC-202ENST00000548171 Q6ZQT0 140 aa9.34□□□□□ -0.91
GATC-202ENST00000548171 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
GATC-202ENST00000548171 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
GATC-202ENST00000548171 C9JAW5 83 aa9.32□□□□□ -0.92
GATC-202ENST00000548171 K7ERJ3 54 aa9.31□□□□□ -0.92
GATC-202ENST00000548171 Q6ZVQ6 151 aa9.28□□□□□ -0.92
GATC-202ENST00000548171 HSD52Q0P140 79 aa9.27□□□□□ -0.93
GATC-202ENST00000548171 A0A1B0GW54 56 aa9.23□□□□□ -0.93
GATC-202ENST00000548171 A6NN06 94 aa9.21□□□□□ -0.94
GATC-202ENST00000548171 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
GATC-202ENST00000548171 SCGB1C2P0DMR2 95 aa9.2□□□□□ -0.94
GATC-202ENST00000548171 KRTAP20-1Q3LI63 56 aa9.19□□□□□ -0.94
GATC-202ENST00000548171 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
GATC-202ENST00000548171 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
GATC-202ENST00000548171 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
GATC-202ENST00000548171 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
GATC-202ENST00000548171 MUC12Q9UKN1 5478 aa9.13□□□□□ -0.95
GATC-202ENST00000548171 LOC110117498A0A087WWA1 95 aa9.13□□□□□ -0.95
GATC-202ENST00000548171 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
GATC-202ENST00000548171 PDE6GP18545 87 aa9.12□□□□□ -0.95
GATC-202ENST00000548171 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
GATC-202ENST00000548171 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
GATC-202ENST00000548171 NDUFS5O43920 106 aa9.09□□□□□ -0.95
GATC-202ENST00000548171 MT1BP07438 61 aa9.09□□□□□ -0.95
GATC-202ENST00000548171 Q5VV11 94 aa9.09□□□□□ -0.95
GATC-202ENST00000548171 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
GATC-202ENST00000548171 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
GATC-202ENST00000548171 FAM236AA0A1B0GUQ0 79 aa9.07□□□□□ -0.96
GATC-202ENST00000548171 FAM236BA0A1B0GV22 79 aa9.07□□□□□ -0.96
GATC-202ENST00000548171 NREPQ16612 68 aa9.06□□□□□ -0.96
GATC-202ENST00000548171 KRTAP5-9P26371 169 aa9.04□□□□□ -0.96
GATC-202ENST00000548171 ATXN8Q156A1 80 aa9.02□□□□□ -0.97
GATC-202ENST00000548171 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
GATC-202ENST00000548171 UQCR10Q9UDW1 63 aa9.02□□□□□ -0.97
GATC-202ENST00000548171 KRTAP10-5P60370 271 aa9.01□□□□□ -0.97
GATC-202ENST00000548171 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
GATC-202ENST00000548171 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
GATC-202ENST00000548171 C5orf47Q569G3 176 aa9□□□□□ -0.97
GATC-202ENST00000548171 Q5W150 140 aa9□□□□□ -0.97
GATC-202ENST00000548171 K7EQZ3 153 aa8.99□□□□□ -0.97
GATC-202ENST00000548171 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
GATC-202ENST00000548171 PYY3Q5JQD4 70 aa8.98□□□□□ -0.97
GATC-202ENST00000548171 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
GATC-202ENST00000548171 S4R3F8 94 aa8.89□□□□□ -0.99
GATC-202ENST00000548171 KMT2DO14686 5537 aa8.88□□□□□ -0.99
GATC-202ENST00000548171 BPY2O14599 106 aa8.86□□□□□ -0.99
GATC-202ENST00000548171 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
GATC-202ENST00000548171 CXCL6P80162 114 aa8.84□□□□□ -0.99
GATC-202ENST00000548171 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
GATC-202ENST00000548171 KRTAP2-3P0C7H8 128 aa8.83□□□□□ -1
GATC-202ENST00000548171 NAA38Q9BRA0 125 aaKnown RBP8.83□□□□□ -1
GATC-202ENST00000548171 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
GATC-202ENST00000548171 KRTAP2-4Q9BYR9 128 aa8.83□□□□□ -1
GATC-202ENST00000548171 KLKP1Q107X0 134 aa8.82□□□□□ -1
GATC-202ENST00000548171 LCA10Q71F78 164 aa8.81□□□□□ -1
GATC-202ENST00000548171 M0R143 59 aa8.79□□□□□ -1
GATC-202ENST00000548171 IMUPQ9GZP8 106 aa8.78□□□□□ -1
GATC-202ENST00000548171 MDN1Q9NU22 5596 aa8.77□□□□□ -1.01
GATC-202ENST00000548171 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
GATC-202ENST00000548171 Q8N9L7 120 aa8.74□□□□□ -1.01
GATC-202ENST00000548171 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
GATC-202ENST00000548171 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
GATC-202ENST00000548171 H3BT86 120 aa8.67□□□□□ -1.02
GATC-202ENST00000548171 SPRR2FQ96RM1 72 aa8.64□□□□□ -1.03
GATC-202ENST00000548171 SPRR2EP22531 72 aa8.62□□□□□ -1.03
GATC-202ENST00000548171 SPRR2BP35325 72 aa8.62□□□□□ -1.03
GATC-202ENST00000548171 SPRR2AP35326 72 aa8.62□□□□□ -1.03
GATC-202ENST00000548171 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
GATC-202ENST00000548171 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
GATC-202ENST00000548171 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
GATC-202ENST00000548171 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
GATC-202ENST00000548171 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
GATC-202ENST00000548171 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
GATC-202ENST00000548171 UBL5Q9BZL1 73 aa8.48□□□□□ -1.05
GATC-202ENST00000548171 TMA7Q9Y2S6 64 aaKnown RBP8.48□□□□□ -1.05
GATC-202ENST00000548171 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.06
GATC-202ENST00000548171 C9orf118A6NHY6 69 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms