RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 LY6G6CO95867 125 aa9.51□□□□□ -0.89
CNOT2-209ENST00000548159 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
CNOT2-209ENST00000548159 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
CNOT2-209ENST00000548159 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
CNOT2-209ENST00000548159 CDK2AP2O75956 126 aa9.48□□□□□ -0.89
CNOT2-209ENST00000548159 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
CNOT2-209ENST00000548159 TP53AIP1Q9HCN2 124 aa9.47□□□□□ -0.89
CNOT2-209ENST00000548159 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
CNOT2-209ENST00000548159 CD164Q04900 197 aa9.47□□□□□ -0.89
CNOT2-209ENST00000548159 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
CNOT2-209ENST00000548159 A8MUN3 132 aa9.45□□□□□ -0.9
CNOT2-209ENST00000548159 IGLV7-46A0A075B6I9 117 aa9.44□□□□□ -0.9
CNOT2-209ENST00000548159 LRP1BQ9NZR2 4599 aa9.42□□□□□ -0.9
CNOT2-209ENST00000548159 COA5Q86WW8 74 aa9.41□□□□□ -0.9
CNOT2-209ENST00000548159 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
CNOT2-209ENST00000548159 Q5W150 140 aa9.39□□□□□ -0.91
CNOT2-209ENST00000548159 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
CNOT2-209ENST00000548159 PKD1P98161 4303 aa9.38□□□□□ -0.91
CNOT2-209ENST00000548159 Q5VV11 94 aa9.36□□□□□ -0.91
CNOT2-209ENST00000548159 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
CNOT2-209ENST00000548159 A8MU10 97 aa9.34□□□□□ -0.91
CNOT2-209ENST00000548159 V9GYY9 64 aa9.34□□□□□ -0.91
CNOT2-209ENST00000548159 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
CNOT2-209ENST00000548159 KRTAP10-1P60331 282 aa9.32□□□□□ -0.92
CNOT2-209ENST00000548159 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
CNOT2-209ENST00000548159 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
CNOT2-209ENST00000548159 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
CNOT2-209ENST00000548159 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
CNOT2-209ENST00000548159 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
CNOT2-209ENST00000548159 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CNOT2-209ENST00000548159 HRES1P13985 223 aa9.29□□□□□ -0.92
CNOT2-209ENST00000548159 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
CNOT2-209ENST00000548159 SPAG11AQ6PDA7 123 aa9.26□□□□□ -0.93
CNOT2-209ENST00000548159 Q6ZSA8 131 aa9.26□□□□□ -0.93
CNOT2-209ENST00000548159 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
CNOT2-209ENST00000548159 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
CNOT2-209ENST00000548159 LINC00313P59037 77 aa9.23□□□□□ -0.93
CNOT2-209ENST00000548159 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
CNOT2-209ENST00000548159 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.94
CNOT2-209ENST00000548159 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
CNOT2-209ENST00000548159 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
CNOT2-209ENST00000548159 Q75L30 129 aa9.16□□□□□ -0.94
CNOT2-209ENST00000548159 LCA10Q71F78 164 aa9.15□□□□□ -0.94
CNOT2-209ENST00000548159 LINC01558Q9Y6Z2 57 aa9.15□□□□□ -0.94
CNOT2-209ENST00000548159 A6NED7 52 aa9.13□□□□□ -0.95
CNOT2-209ENST00000548159 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
CNOT2-209ENST00000548159 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
CNOT2-209ENST00000548159 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
CNOT2-209ENST00000548159 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
CNOT2-209ENST00000548159 SEC61GP60059 68 aa9.1□□□□□ -0.95
CNOT2-209ENST00000548159 ACYP2P14621 99 aa9.07□□□□□ -0.96
CNOT2-209ENST00000548159 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
CNOT2-209ENST00000548159 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
CNOT2-209ENST00000548159 SPINK7P58062 85 aa9.06□□□□□ -0.96
CNOT2-209ENST00000548159 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
CNOT2-209ENST00000548159 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
CNOT2-209ENST00000548159 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
CNOT2-209ENST00000548159 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
CNOT2-209ENST00000548159 SACSQ9NZJ4 4579 aa9.02□□□□□ -0.97
CNOT2-209ENST00000548159 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
CNOT2-209ENST00000548159 SPINK1P00995 79 aa8.98□□□□□ -0.97
CNOT2-209ENST00000548159 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
CNOT2-209ENST00000548159 ATP11AUNQ6ZP68 121 aa8.96□□□□□ -0.97
CNOT2-209ENST00000548159 FAT1Q14517 4588 aa8.96□□□□□ -0.97
CNOT2-209ENST00000548159 DYNC1H1Q14204 4646 aaKnown RBP8.96□□□□□ -0.98
CNOT2-209ENST00000548159 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
CNOT2-209ENST00000548159 A6NN06 94 aa8.87□□□□□ -0.99
CNOT2-209ENST00000548159 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
CNOT2-209ENST00000548159 A0A1B0GU69 56 aa8.85□□□□□ -0.99
CNOT2-209ENST00000548159 KTN1-AS1Q86SY8 53 aa8.84□□□□□ -0.99
CNOT2-209ENST00000548159 Q8N1X5 172 aa8.83□□□□□ -1
CNOT2-209ENST00000548159 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
CNOT2-209ENST00000548159 C9orf92A6NGG3 77 aa8.82□□□□□ -1
CNOT2-209ENST00000548159 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
CNOT2-209ENST00000548159 KRTAP10-4P60372 401 aaPredicted RBP8.79□□□□□ -1
CNOT2-209ENST00000548159 A0A1B0GVY2 172 aa8.77□□□□□ -1.01
CNOT2-209ENST00000548159 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
CNOT2-209ENST00000548159 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
CNOT2-209ENST00000548159 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
CNOT2-209ENST00000548159 A8MUU9 505 aa8.69□□□□□ -1.02
CNOT2-209ENST00000548159 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
CNOT2-209ENST00000548159 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
CNOT2-209ENST00000548159 RYR2Q92736 4967 aa8.68□□□□□ -1.02
CNOT2-209ENST00000548159 UQCR11O14957 56 aa8.66□□□□□ -1.02
CNOT2-209ENST00000548159 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
CNOT2-209ENST00000548159 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.02
CNOT2-209ENST00000548159 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
CNOT2-209ENST00000548159 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
CNOT2-209ENST00000548159 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
CNOT2-209ENST00000548159 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
CNOT2-209ENST00000548159 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
CNOT2-209ENST00000548159 TNXBP22105 4242 aa8.53□□□□□ -1.04
CNOT2-209ENST00000548159 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CNOT2-209ENST00000548159 HSPG2P98160 4391 aa8.5□□□□□ -1.05
CNOT2-209ENST00000548159 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
CNOT2-209ENST00000548159 H0YAA0 97 aa8.45□□□□□ -1.06
CNOT2-209ENST00000548159 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CNOT2-209ENST00000548159 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
CNOT2-209ENST00000548159 Q5VSD8 79 aa8.4□□□□□ -1.07
CNOT2-209ENST00000548159 RYR3Q15413 4870 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms