RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 HIGD1BQ9P298 99 aa4.02□□□□□ -1.77
PTCH1-214ENST00000547615 A0A1W2PPM0 123 aa4.01□□□□□ -1.77
PTCH1-214ENST00000547615 J3QR89 54 aa4.01□□□□□ -1.77
PTCH1-214ENST00000547615 DSCR10P59022 87 aa4.01□□□□□ -1.77
PTCH1-214ENST00000547615 ATOH7Q8N100 152 aa4.01□□□□□ -1.77
PTCH1-214ENST00000547615 TTTY13Q9BZ97 58 aa4.01□□□□□ -1.77
PTCH1-214ENST00000547615 H3BUT2 72 aa4□□□□□ -1.77
PTCH1-214ENST00000547615 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
PTCH1-214ENST00000547615 SPCS1Q9Y6A9 102 aa3.99□□□□□ -1.77
PTCH1-214ENST00000547615 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
PTCH1-214ENST00000547615 FABP2P12104 132 aa3.98□□□□□ -1.77
PTCH1-214ENST00000547615 NEBP20929 6669 aa3.98□□□□□ -1.77
PTCH1-214ENST00000547615 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
PTCH1-214ENST00000547615 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
PTCH1-214ENST00000547615 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
PTCH1-214ENST00000547615 A0A1B0GX51 115 aa3.96□□□□□ -1.78
PTCH1-214ENST00000547615 H0YGX0 51 aa3.96□□□□□ -1.78
PTCH1-214ENST00000547615 H3BMG7 143 aa3.96□□□□□ -1.78
PTCH1-214ENST00000547615 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
PTCH1-214ENST00000547615 PRO0461Q9UI25 63 aa3.96□□□□□ -1.78
PTCH1-214ENST00000547615 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
PTCH1-214ENST00000547615 H3BQ85 93 aa3.95□□□□□ -1.78
PTCH1-214ENST00000547615 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
PTCH1-214ENST00000547615 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
PTCH1-214ENST00000547615 Q8N9P0 234 aaPredicted RBP3.94□□□□□ -1.78
PTCH1-214ENST00000547615 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
PTCH1-214ENST00000547615 SPINK7P58062 85 aa3.93□□□□□ -1.78
PTCH1-214ENST00000547615 CEND1Q8N111 149 aa3.93□□□□□ -1.78
PTCH1-214ENST00000547615 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
PTCH1-214ENST00000547615 FAM218AQ96MZ4 157 aa3.93□□□□□ -1.78
PTCH1-214ENST00000547615 IGHV6-1A0A0B4J1U7 121 aa3.92□□□□□ -1.78
PTCH1-214ENST00000547615 FXYD2P54710 66 aa3.91□□□□□ -1.78
PTCH1-214ENST00000547615 ANKRD29Q8N6D5 301 aa3.91□□□□□ -1.78
PTCH1-214ENST00000547615 J3KT08 172 aa3.9□□□□□ -1.79
PTCH1-214ENST00000547615 TRACP01848 142 aa3.9□□□□□ -1.79
PTCH1-214ENST00000547615 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
PTCH1-214ENST00000547615 HIST1H4GQ99525 98 aa3.9□□□□□ -1.79
PTCH1-214ENST00000547615 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
PTCH1-214ENST00000547615 A0A1W2PNM2 257 aa3.89□□□□□ -1.79
PTCH1-214ENST00000547615 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
PTCH1-214ENST00000547615 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
PTCH1-214ENST00000547615 A6NN06 94 aa3.88□□□□□ -1.79
PTCH1-214ENST00000547615 DNAL4O96015 105 aa3.88□□□□□ -1.79
PTCH1-214ENST00000547615 NDUFB1O75438 58 aa3.87□□□□□ -1.79
PTCH1-214ENST00000547615 NAA38Q9BRA0 125 aaKnown RBP3.87□□□□□ -1.79
PTCH1-214ENST00000547615 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
PTCH1-214ENST00000547615 TMEM256-PLSCR3K7ERE1 68 aa3.86□□□□□ -1.79
PTCH1-214ENST00000547615 CCKP06307 115 aa3.86□□□□□ -1.79
PTCH1-214ENST00000547615 MT-ATP8P03928 68 aa3.85□□□□□ -1.79
PTCH1-214ENST00000547615 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
PTCH1-214ENST00000547615 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
PTCH1-214ENST00000547615 K7ERJ3 54 aa3.84□□□□□ -1.79
PTCH1-214ENST00000547615 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.8
PTCH1-214ENST00000547615 COX6CP09669 75 aa3.83□□□□□ -1.8
PTCH1-214ENST00000547615 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
PTCH1-214ENST00000547615 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
PTCH1-214ENST00000547615 ANAPC13Q9BS18 74 aa3.83□□□□□ -1.8
PTCH1-214ENST00000547615 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
PTCH1-214ENST00000547615 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 FAM240AA0A1B0GVK7 77 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 SCGB1C2P0DMR2 95 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 Q5VV11 94 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 IMUPQ9GZP8 106 aa3.81□□□□□ -1.8
PTCH1-214ENST00000547615 A0A1B0GW54 56 aa3.79□□□□□ -1.8
PTCH1-214ENST00000547615 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
PTCH1-214ENST00000547615 PSMB2P49721 201 aa3.79□□□□□ -1.8
PTCH1-214ENST00000547615 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
PTCH1-214ENST00000547615 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
PTCH1-214ENST00000547615 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
PTCH1-214ENST00000547615 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
PTCH1-214ENST00000547615 ATXN8Q156A1 80 aa3.78□□□□□ -1.8
PTCH1-214ENST00000547615 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
PTCH1-214ENST00000547615 RBM3P98179 157 aaKnown RBP3.77□□□□□ -1.81
PTCH1-214ENST00000547615 H3BT86 120 aa3.76□□□□□ -1.81
PTCH1-214ENST00000547615 ACYP1P07311 99 aa3.76□□□□□ -1.81
PTCH1-214ENST00000547615 SMIM20Q8N5G0 67 aa3.76□□□□□ -1.81
PTCH1-214ENST00000547615 C8orf17Q9NRJ1 99 aa3.76□□□□□ -1.81
PTCH1-214ENST00000547615 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
PTCH1-214ENST00000547615 Q6ZVQ6 151 aa3.75□□□□□ -1.81
PTCH1-214ENST00000547615 C9JAW5 83 aa3.74□□□□□ -1.81
PTCH1-214ENST00000547615 TRIAP1O43715 76 aa3.74□□□□□ -1.81
PTCH1-214ENST00000547615 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
PTCH1-214ENST00000547615 C7orf65Q6ZTY9 151 aa3.74□□□□□ -1.81
PTCH1-214ENST00000547615 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
PTCH1-214ENST00000547615 Q6ZQT0 140 aa3.73□□□□□ -1.81
PTCH1-214ENST00000547615 TMEM254Q8TBM7 123 aa3.73□□□□□ -1.81
PTCH1-214ENST00000547615 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
PTCH1-214ENST00000547615 UQCRQO14949 82 aa3.72□□□□□ -1.81
PTCH1-214ENST00000547615 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
PTCH1-214ENST00000547615 MT1BP07438 61 aa3.71□□□□□ -1.82
PTCH1-214ENST00000547615 LINC00643Q86TS7 51 aa3.71□□□□□ -1.82
PTCH1-214ENST00000547615 PDE6GP18545 87 aa3.7□□□□□ -1.82
PTCH1-214ENST00000547615 HIST1H4AP62805 103 aaKnown RBP3.7□□□□□ -1.82
PTCH1-214ENST00000547615 JMJD7-PLA2G4BH0Y9G9 81 aa3.69□□□□□ -1.82
PTCH1-214ENST00000547615 NDUFS5O43920 106 aa3.69□□□□□ -1.82
PTCH1-214ENST00000547615 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
PTCH1-214ENST00000547615 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
PTCH1-214ENST00000547615 COX7CP15954 63 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms