RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 LINC00472Q9H8W2 130 aa12.59□□□□□ -0.39
RBFOX1-210ENST00000547605 TRAV7A0A075B6U4 112 aa12.58□□□□□ -0.4
RBFOX1-210ENST00000547605 DSCR10P59022 87 aa12.58□□□□□ -0.4
RBFOX1-210ENST00000547605 TNXBP22105 4242 aa12.58□□□□□ -0.4
RBFOX1-210ENST00000547605 ASB16-AS1Q495Z4 193 aa12.58□□□□□ -0.4
RBFOX1-210ENST00000547605 Q8N9L7 120 aa12.58□□□□□ -0.4
RBFOX1-210ENST00000547605 J3KT08 172 aa12.57□□□□□ -0.4
RBFOX1-210ENST00000547605 Q96NJ1 140 aa12.56□□□□□ -0.4
RBFOX1-210ENST00000547605 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
RBFOX1-210ENST00000547605 J3QL48 77 aa12.52□□□□□ -0.41
RBFOX1-210ENST00000547605 K7EQZ3 153 aa12.51□□□□□ -0.41
RBFOX1-210ENST00000547605 DMBT1Q9UGM3 2413 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-210ENST00000547605 A8MWP4 228 aa12.48□□□□□ -0.41
RBFOX1-210ENST00000547605 RETNLBQ9BQ08 111 aa12.46□□□□□ -0.41
RBFOX1-210ENST00000547605 HCG22E2RYF7 251 aa12.46□□□□□ -0.42
RBFOX1-210ENST00000547605 NDUFB1O75438 58 aa12.44□□□□□ -0.42
RBFOX1-210ENST00000547605 PRR15Q8IV56 129 aa12.44□□□□□ -0.42
RBFOX1-210ENST00000547605 OCR1Q9BZK8 76 aa12.41□□□□□ -0.42
RBFOX1-210ENST00000547605 IGHV6-1A0A0B4J1U7 121 aa12.36□□□□□ -0.43
RBFOX1-210ENST00000547605 C20orf197Q8N268 126 aa12.36□□□□□ -0.43
RBFOX1-210ENST00000547605 A0A1B0GVX0 72 aa12.34□□□□□ -0.43
RBFOX1-210ENST00000547605 KLKP1Q107X0 134 aa12.34□□□□□ -0.43
RBFOX1-210ENST00000547605 CASC2Q6XLA1 102 aa12.31□□□□□ -0.44
RBFOX1-210ENST00000547605 NDUFC1O43677 76 aa12.3□□□□□ -0.44
RBFOX1-210ENST00000547605 TMEM258P61165 79 aa12.3□□□□□ -0.44
RBFOX1-210ENST00000547605 PCLOQ9Y6V0 5065 aa12.28□□□□□ -0.44
RBFOX1-210ENST00000547605 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
RBFOX1-210ENST00000547605 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
RBFOX1-210ENST00000547605 WFDC13Q8IUB5 93 aa12.27□□□□□ -0.44
RBFOX1-210ENST00000547605 PRR4Q16378 134 aa12.26□□□□□ -0.45
RBFOX1-210ENST00000547605 C5orf47Q569G3 176 aa12.26□□□□□ -0.45
RBFOX1-210ENST00000547605 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
RBFOX1-210ENST00000547605 NOTCH2NLQ7Z3S9 236 aa12.25□□□□□ -0.45
RBFOX1-210ENST00000547605 LINC00313P59037 77 aa12.24□□□□□ -0.45
RBFOX1-210ENST00000547605 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
RBFOX1-210ENST00000547605 MMP24-AS1A0A0U1RRL7 71 aa12.23□□□□□ -0.45
RBFOX1-210ENST00000547605 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
RBFOX1-210ENST00000547605 C8orf87E5RJ46 101 aa12.23□□□□□ -0.45
RBFOX1-210ENST00000547605 CYSTM1Q9H1C7 97 aa12.21□□□□□ -0.45
RBFOX1-210ENST00000547605 A0A0U1RQV1 116 aa12.2□□□□□ -0.46
RBFOX1-210ENST00000547605 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
RBFOX1-210ENST00000547605 SNURFQ9Y675 71 aa12.18□□□□□ -0.46
RBFOX1-210ENST00000547605 H7BZZ5 65 aa12.16□□□□□ -0.46
RBFOX1-210ENST00000547605 TP53AIP1Q9HCN2 124 aa12.16□□□□□ -0.46
RBFOX1-210ENST00000547605 MP68P56378 58 aa12.15□□□□□ -0.46
RBFOX1-210ENST00000547605 H3BPC8 53 aa12.14□□□□□ -0.47
RBFOX1-210ENST00000547605 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-210ENST00000547605 ATP5EP56381 51 aaPredicted RBP12.09□□□□□ -0.47
RBFOX1-210ENST00000547605 FAM236DA0A1B0GTK5 79 aa12.07□□□□□ -0.48
RBFOX1-210ENST00000547605 KRTAP16-1A8MUX0 517 aa12.07□□□□□ -0.48
RBFOX1-210ENST00000547605 FAM236CP0DP71 79 aa12.07□□□□□ -0.48
RBFOX1-210ENST00000547605 KRTAP13-3Q3SY46 172 aa12.07□□□□□ -0.48
RBFOX1-210ENST00000547605 NDUFS5O43920 106 aa12.06□□□□□ -0.48
RBFOX1-210ENST00000547605 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-210ENST00000547605 RPS28P62857 69 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-210ENST00000547605 H0Y9P7 68 aa12.03□□□□□ -0.48
RBFOX1-210ENST00000547605 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.48
RBFOX1-210ENST00000547605 TPRXLQ17RH7 258 aa12.02□□□□□ -0.49
RBFOX1-210ENST00000547605 Q8N9P0 234 aaPredicted RBP11.98□□□□□ -0.49
RBFOX1-210ENST00000547605 LINC00208Q96KT6 92 aa11.97□□□□□ -0.49
RBFOX1-210ENST00000547605 XP32Q5T750 250 aa11.95□□□□□ -0.5
RBFOX1-210ENST00000547605 C20orf166-AS1Q96NR2 134 aa11.93□□□□□ -0.5
RBFOX1-210ENST00000547605 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
RBFOX1-210ENST00000547605 HERC1Q15751 4861 aa11.92□□□□□ -0.5
RBFOX1-210ENST00000547605 A8MUU9 505 aa11.91□□□□□ -0.5
RBFOX1-210ENST00000547605 SERP1Q9Y6X1 66 aa11.9□□□□□ -0.5
RBFOX1-210ENST00000547605 Q75L30 129 aa11.89□□□□□ -0.51
RBFOX1-210ENST00000547605 LPAP08519 4548 aa11.85□□□□□ -0.51
RBFOX1-210ENST00000547605 RPL37P61927 97 aaKnown RBP11.83□□□□□ -0.51
RBFOX1-210ENST00000547605 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.51
RBFOX1-210ENST00000547605 SVIPQ8NHG7 77 aa11.81□□□□□ -0.52
RBFOX1-210ENST00000547605 LOC101927531A0A1B0GV80 90 aa11.8□□□□□ -0.52
RBFOX1-210ENST00000547605 Q5W150 140 aa11.8□□□□□ -0.52
RBFOX1-210ENST00000547605 ATP11AUNQ6ZP68 121 aa11.79□□□□□ -0.52
RBFOX1-210ENST00000547605 CYP4F30PQ9H0H9 118 aa11.79□□□□□ -0.52
RBFOX1-210ENST00000547605 LRP2P98164 4655 aa11.71□□□□□ -0.53
RBFOX1-210ENST00000547605 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.54
RBFOX1-210ENST00000547605 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
RBFOX1-210ENST00000547605 SMIM26A0A096LP01 95 aa11.65□□□□□ -0.55
RBFOX1-210ENST00000547605 SEC61BP60468 96 aaKnown RBP11.65□□□□□ -0.55
RBFOX1-210ENST00000547605 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
RBFOX1-210ENST00000547605 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
RBFOX1-210ENST00000547605 C7orf65Q6ZTY9 151 aa11.55□□□□□ -0.56
RBFOX1-210ENST00000547605 SPINK7P58062 85 aa11.53□□□□□ -0.56
RBFOX1-210ENST00000547605 HRES1P13985 223 aa11.43□□□□□ -0.58
RBFOX1-210ENST00000547605 COA5Q86WW8 74 aa11.41□□□□□ -0.58
RBFOX1-210ENST00000547605 ACYP2P14621 99 aa11.39□□□□□ -0.59
RBFOX1-210ENST00000547605 MUC17Q685J3 4493 aa11.39□□□□□ -0.59
RBFOX1-210ENST00000547605 DMAC1Q96GE9 116 aa11.37□□□□□ -0.59
RBFOX1-210ENST00000547605 KRTAP4-1Q9BYQ7 146 aa11.37□□□□□ -0.59
RBFOX1-210ENST00000547605 V9GYY9 64 aa11.37□□□□□ -0.59
RBFOX1-210ENST00000547605 Q1T7F1 81 aa11.35□□□□□ -0.59
RBFOX1-210ENST00000547605 C4orf26Q17RF5 130 aa11.31□□□□□ -0.6
RBFOX1-210ENST00000547605 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
RBFOX1-210ENST00000547605 A8MUN3 132 aa11.25□□□□□ -0.61
RBFOX1-210ENST00000547605 RBM12B-AS1Q9P1G2 102 aa11.22□□□□□ -0.61
RBFOX1-210ENST00000547605 UBR4Q5T4S7 5183 aa11.22□□□□□ -0.61
RBFOX1-210ENST00000547605 CHKB-CPT1BH3BT56 60 aa11.2□□□□□ -0.62
RBFOX1-210ENST00000547605 COX6B2Q6YFQ2 88 aa11.18□□□□□ -0.62
RBFOX1-210ENST00000547605 MUC2Q02817 5179 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms