RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
NPAS3-205ENST00000547068 DNAH7Q8WXX0 4024 aa6.42□□□□□ -1.38
NPAS3-205ENST00000547068 ACYP2P14621 99 aa6.41□□□□□ -1.38
NPAS3-205ENST00000547068 LINC01554Q52M75 96 aa6.41□□□□□ -1.38
NPAS3-205ENST00000547068 CSMD3Q7Z407 3707 aa6.41□□□□□ -1.38
NPAS3-205ENST00000547068 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.39
NPAS3-205ENST00000547068 A0A087X002 238 aa6.4□□□□□ -1.39
NPAS3-205ENST00000547068 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.39
NPAS3-205ENST00000547068 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
NPAS3-205ENST00000547068 LY6G6CO95867 125 aa6.38□□□□□ -1.39
NPAS3-205ENST00000547068 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
NPAS3-205ENST00000547068 Q5W150 140 aa6.37□□□□□ -1.39
NPAS3-205ENST00000547068 DYNC2H1Q8NCM8 4307 aaKnown RBP6.37□□□□□ -1.39
NPAS3-205ENST00000547068 A0A1B0GU69 56 aa6.37□□□□□ -1.39
NPAS3-205ENST00000547068 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
NPAS3-205ENST00000547068 RTL8CO15255 209 aa6.35□□□□□ -1.39
NPAS3-205ENST00000547068 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
NPAS3-205ENST00000547068 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
NPAS3-205ENST00000547068 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
NPAS3-205ENST00000547068 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
NPAS3-205ENST00000547068 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
NPAS3-205ENST00000547068 LYSTQ99698 3801 aa6.33□□□□□ -1.4
NPAS3-205ENST00000547068 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
NPAS3-205ENST00000547068 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
NPAS3-205ENST00000547068 H3BS24 57 aa6.32□□□□□ -1.4
NPAS3-205ENST00000547068 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
NPAS3-205ENST00000547068 PANO1I0J062 215 aa6.31□□□□□ -1.4
NPAS3-205ENST00000547068 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
NPAS3-205ENST00000547068 UQCR11O14957 56 aa6.3□□□□□ -1.4
NPAS3-205ENST00000547068 DNAH10Q8IVF4 4471 aa6.29□□□□□ -1.4
NPAS3-205ENST00000547068 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
NPAS3-205ENST00000547068 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
NPAS3-205ENST00000547068 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.4
NPAS3-205ENST00000547068 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
NPAS3-205ENST00000547068 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
NPAS3-205ENST00000547068 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
NPAS3-205ENST00000547068 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
NPAS3-205ENST00000547068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
NPAS3-205ENST00000547068 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
NPAS3-205ENST00000547068 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.42
NPAS3-205ENST00000547068 KMT2AQ03164 3969 aa6.21□□□□□ -1.42
NPAS3-205ENST00000547068 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
NPAS3-205ENST00000547068 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
NPAS3-205ENST00000547068 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
NPAS3-205ENST00000547068 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
NPAS3-205ENST00000547068 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
NPAS3-205ENST00000547068 ZNF861PO60384 105 aa6.18□□□□□ -1.42
NPAS3-205ENST00000547068 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
NPAS3-205ENST00000547068 IGLV5-52A0A0A0MRZ9 124 aa6.18□□□□□ -1.42
NPAS3-205ENST00000547068 A0A087WTM6 91 aa6.17□□□□□ -1.42
NPAS3-205ENST00000547068 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
NPAS3-205ENST00000547068 IGLV7-43P04211 117 aa6.13□□□□□ -1.43
NPAS3-205ENST00000547068 RYR3Q15413 4870 aa6.12□□□□□ -1.43
NPAS3-205ENST00000547068 SACSQ9NZJ4 4579 aa6.12□□□□□ -1.43
NPAS3-205ENST00000547068 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
NPAS3-205ENST00000547068 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
NPAS3-205ENST00000547068 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
NPAS3-205ENST00000547068 RYR2Q92736 4967 aa6.08□□□□□ -1.44
NPAS3-205ENST00000547068 SSBP3-AS1Q7Z2R9 100 aa6.07□□□□□ -1.44
NPAS3-205ENST00000547068 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
NPAS3-205ENST00000547068 SPINK1P00995 79 aa6.07□□□□□ -1.44
NPAS3-205ENST00000547068 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
NPAS3-205ENST00000547068 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
NPAS3-205ENST00000547068 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
NPAS3-205ENST00000547068 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
NPAS3-205ENST00000547068 A8MUU9 505 aa6.03□□□□□ -1.44
NPAS3-205ENST00000547068 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
NPAS3-205ENST00000547068 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
NPAS3-205ENST00000547068 ROMO1P60602 79 aa6.01□□□□□ -1.45
NPAS3-205ENST00000547068 H0YAA0 97 aa6□□□□□ -1.45
NPAS3-205ENST00000547068 Q6ZSA8 131 aa5.99□□□□□ -1.45
NPAS3-205ENST00000547068 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
NPAS3-205ENST00000547068 FAT2Q9NYQ8 4349 aa5.99□□□□□ -1.45
NPAS3-205ENST00000547068 Q8N1X5 172 aa5.99□□□□□ -1.45
NPAS3-205ENST00000547068 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
NPAS3-205ENST00000547068 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
NPAS3-205ENST00000547068 PKD1P98161 4303 aa5.95□□□□□ -1.46
NPAS3-205ENST00000547068 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
NPAS3-205ENST00000547068 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
NPAS3-205ENST00000547068 A0A1B0GU33 70 aa5.92□□□□□ -1.46
NPAS3-205ENST00000547068 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
NPAS3-205ENST00000547068 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
NPAS3-205ENST00000547068 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.46
NPAS3-205ENST00000547068 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
NPAS3-205ENST00000547068 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
NPAS3-205ENST00000547068 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
NPAS3-205ENST00000547068 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
NPAS3-205ENST00000547068 K7ERS5 55 aa5.84□□□□□ -1.47
NPAS3-205ENST00000547068 LRP1BQ9NZR2 4599 aa5.83□□□□□ -1.48
NPAS3-205ENST00000547068 P0C880 135 aa5.83□□□□□ -1.48
NPAS3-205ENST00000547068 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
NPAS3-205ENST00000547068 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
NPAS3-205ENST00000547068 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
NPAS3-205ENST00000547068 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
NPAS3-205ENST00000547068 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
NPAS3-205ENST00000547068 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
NPAS3-205ENST00000547068 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
NPAS3-205ENST00000547068 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
NPAS3-205ENST00000547068 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
NPAS3-205ENST00000547068 Q5VSD8 79 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms