RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 A8MWP4 228 aa8.88□□□□□ -0.99
TRAFD1-203ENST00000547063 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
TRAFD1-203ENST00000547063 PRR4Q16378 134 aa8.87□□□□□ -0.99
TRAFD1-203ENST00000547063 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
TRAFD1-203ENST00000547063 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
TRAFD1-203ENST00000547063 DSCR10P59022 87 aa8.85□□□□□ -0.99
TRAFD1-203ENST00000547063 A0A1B0GVX0 72 aa8.84□□□□□ -0.99
TRAFD1-203ENST00000547063 PRR15Q8IV56 129 aa8.83□□□□□ -1
TRAFD1-203ENST00000547063 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
TRAFD1-203ENST00000547063 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
TRAFD1-203ENST00000547063 C8orf87E5RJ46 101 aa8.81□□□□□ -1
TRAFD1-203ENST00000547063 K7EQZ3 153 aa8.81□□□□□ -1
TRAFD1-203ENST00000547063 LINC00313P59037 77 aa8.78□□□□□ -1
TRAFD1-203ENST00000547063 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
TRAFD1-203ENST00000547063 Q8N9L7 120 aa8.77□□□□□ -1.01
TRAFD1-203ENST00000547063 HIST1H4AP62805 103 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-203ENST00000547063 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
TRAFD1-203ENST00000547063 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
TRAFD1-203ENST00000547063 IMUPQ9GZP8 106 aa8.74□□□□□ -1.01
TRAFD1-203ENST00000547063 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
TRAFD1-203ENST00000547063 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
TRAFD1-203ENST00000547063 MMP24-AS1A0A0U1RRL7 71 aa8.71□□□□□ -1.02
TRAFD1-203ENST00000547063 MT-ATP8P03928 68 aa8.71□□□□□ -1.02
TRAFD1-203ENST00000547063 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
TRAFD1-203ENST00000547063 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
TRAFD1-203ENST00000547063 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
TRAFD1-203ENST00000547063 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
TRAFD1-203ENST00000547063 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
TRAFD1-203ENST00000547063 WFDC13Q8IUB5 93 aa8.66□□□□□ -1.02
TRAFD1-203ENST00000547063 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-203ENST00000547063 KRTAP16-1A8MUX0 517 aa8.64□□□□□ -1.03
TRAFD1-203ENST00000547063 A0A087WVE0 104 aa8.63□□□□□ -1.03
TRAFD1-203ENST00000547063 XP32Q5T750 250 aa8.63□□□□□ -1.03
TRAFD1-203ENST00000547063 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
TRAFD1-203ENST00000547063 Q75L30 129 aa8.6□□□□□ -1.03
TRAFD1-203ENST00000547063 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-203ENST00000547063 A8MUU9 505 aa8.59□□□□□ -1.03
TRAFD1-203ENST00000547063 NDUFS5O43920 106 aa8.57□□□□□ -1.04
TRAFD1-203ENST00000547063 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-203ENST00000547063 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
TRAFD1-203ENST00000547063 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
TRAFD1-203ENST00000547063 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
TRAFD1-203ENST00000547063 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
TRAFD1-203ENST00000547063 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
TRAFD1-203ENST00000547063 HERC1Q15751 4861 aa8.52□□□□□ -1.05
TRAFD1-203ENST00000547063 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-203ENST00000547063 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
TRAFD1-203ENST00000547063 ATOX1O00244 68 aa8.47□□□□□ -1.05
TRAFD1-203ENST00000547063 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-203ENST00000547063 UQCRQO14949 82 aa8.46□□□□□ -1.06
TRAFD1-203ENST00000547063 OCR1Q9BZK8 76 aa8.43□□□□□ -1.06
TRAFD1-203ENST00000547063 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
TRAFD1-203ENST00000547063 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.06
TRAFD1-203ENST00000547063 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.07
TRAFD1-203ENST00000547063 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
TRAFD1-203ENST00000547063 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
TRAFD1-203ENST00000547063 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
TRAFD1-203ENST00000547063 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
TRAFD1-203ENST00000547063 Q5W150 140 aa8.37□□□□□ -1.07
TRAFD1-203ENST00000547063 LPAP08519 4548 aa8.36□□□□□ -1.07
TRAFD1-203ENST00000547063 MP68P56378 58 aa8.35□□□□□ -1.07
TRAFD1-203ENST00000547063 H0Y9P7 68 aa8.34□□□□□ -1.07
TRAFD1-203ENST00000547063 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
TRAFD1-203ENST00000547063 LRP2P98164 4655 aa8.32□□□□□ -1.08
TRAFD1-203ENST00000547063 H3BPC8 53 aa8.32□□□□□ -1.08
TRAFD1-203ENST00000547063 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
TRAFD1-203ENST00000547063 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
TRAFD1-203ENST00000547063 SPINK7P58062 85 aa8.28□□□□□ -1.08
TRAFD1-203ENST00000547063 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
TRAFD1-203ENST00000547063 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
TRAFD1-203ENST00000547063 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
TRAFD1-203ENST00000547063 C1orf64Q8NEQ6 169 aa8.26□□□□□ -1.09
TRAFD1-203ENST00000547063 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
TRAFD1-203ENST00000547063 COX7CP15954 63 aa8.24□□□□□ -1.09
TRAFD1-203ENST00000547063 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
TRAFD1-203ENST00000547063 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
TRAFD1-203ENST00000547063 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
TRAFD1-203ENST00000547063 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
TRAFD1-203ENST00000547063 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
TRAFD1-203ENST00000547063 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
TRAFD1-203ENST00000547063 HRES1P13985 223 aa8.13□□□□□ -1.11
TRAFD1-203ENST00000547063 SNURFQ9Y675 71 aa8.11□□□□□ -1.11
TRAFD1-203ENST00000547063 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
TRAFD1-203ENST00000547063 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
TRAFD1-203ENST00000547063 NDUFC1O43677 76 aa8.07□□□□□ -1.12
TRAFD1-203ENST00000547063 UBR4Q5T4S7 5183 aa8.05□□□□□ -1.12
TRAFD1-203ENST00000547063 C4orf26Q17RF5 130 aa8.05□□□□□ -1.12
TRAFD1-203ENST00000547063 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
TRAFD1-203ENST00000547063 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
TRAFD1-203ENST00000547063 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
TRAFD1-203ENST00000547063 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
TRAFD1-203ENST00000547063 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
TRAFD1-203ENST00000547063 A8MUN3 132 aa7.97□□□□□ -1.13
TRAFD1-203ENST00000547063 H7BZZ5 65 aa7.95□□□□□ -1.14
TRAFD1-203ENST00000547063 PCP4P48539 62 aa7.95□□□□□ -1.14
TRAFD1-203ENST00000547063 H1FX-AS1Q4G0G2 97 aa7.94□□□□□ -1.14
TRAFD1-203ENST00000547063 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
TRAFD1-203ENST00000547063 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
TRAFD1-203ENST00000547063 RNF213Q63HN8 5207 aa7.91□□□□□ -1.14
TRAFD1-203ENST00000547063 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms