RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 DEFB116Q30KQ4 102 aa13.58□□□□□ -0.24
NKX2-1-205ENST00000546983 MTURNQ8N3F0 131 aa13.58□□□□□ -0.24
NKX2-1-205ENST00000546983 NREPQ16612 68 aa13.57□□□□□ -0.24
NKX2-1-205ENST00000546983 A0A1B0GVX0 72 aa13.56□□□□□ -0.24
NKX2-1-205ENST00000546983 A8MUU9 505 aa13.56□□□□□ -0.24
NKX2-1-205ENST00000546983 DSCR10P59022 87 aa13.56□□□□□ -0.24
NKX2-1-205ENST00000546983 IGHV6-1A0A0B4J1U7 121 aa13.55□□□□□ -0.24
NKX2-1-205ENST00000546983 KRTAP4-1Q9BYQ7 146 aa13.53□□□□□ -0.24
NKX2-1-205ENST00000546983 A8MWP4 228 aa13.48□□□□□ -0.25
NKX2-1-205ENST00000546983 F8W1H4 67 aa13.47□□□□□ -0.25
NKX2-1-205ENST00000546983 PRO0461Q9UI25 63 aa13.47□□□□□ -0.25
NKX2-1-205ENST00000546983 SMCPP49901 116 aaPredicted RBP13.46□□□□□ -0.25
NKX2-1-205ENST00000546983 KRTAP16-1A8MUX0 517 aa13.43□□□□□ -0.26
NKX2-1-205ENST00000546983 NOTCH2NLQ7Z3S9 236 aa13.38□□□□□ -0.27
NKX2-1-205ENST00000546983 PRR15Q8IV56 129 aa13.36□□□□□ -0.27
NKX2-1-205ENST00000546983 IGKV3D-7A0A0C4DH55 119 aa13.34□□□□□ -0.27
NKX2-1-205ENST00000546983 BPY2O14599 106 aa13.34□□□□□ -0.27
NKX2-1-205ENST00000546983 LCE2AQ5TA79 106 aaPredicted RBP13.34□□□□□ -0.27
NKX2-1-205ENST00000546983 C8orf17Q9NRJ1 99 aa13.34□□□□□ -0.27
NKX2-1-205ENST00000546983 UBL5Q9BZL1 73 aa13.32□□□□□ -0.28
NKX2-1-205ENST00000546983 Q6ZVQ6 151 aa13.29□□□□□ -0.28
NKX2-1-205ENST00000546983 Q8N9P0 234 aaPredicted RBP13.27□□□□□ -0.29
NKX2-1-205ENST00000546983 COX6B2Q6YFQ2 88 aa13.24□□□□□ -0.29
NKX2-1-205ENST00000546983 FAT4Q6V0I7 4981 aa13.23□□□□□ -0.29
NKX2-1-205ENST00000546983 ETDBQ3ZM63 59 aa13.23□□□□□ -0.29
NKX2-1-205ENST00000546983 TMEM254Q8TBM7 123 aa13.21□□□□□ -0.29
NKX2-1-205ENST00000546983 K7EQZ3 153 aa13.19□□□□□ -0.3
NKX2-1-205ENST00000546983 ZCCHC13Q8WW36 166 aaKnown RBP13.19□□□□□ -0.3
NKX2-1-205ENST00000546983 LINC00846Q9NV44 126 aa13.19□□□□□ -0.3
NKX2-1-205ENST00000546983 KRTAP19-2Q3LHN2 52 aa13.18□□□□□ -0.3
NKX2-1-205ENST00000546983 hDV103S1A0JD37 113 aa13.17□□□□□ -0.3
NKX2-1-205ENST00000546983 MRPL34Q9BQ48 92 aaKnown RBP13.17□□□□□ -0.3
NKX2-1-205ENST00000546983 MMP24-AS1A0A0U1RRL7 71 aa13.16□□□□□ -0.3
NKX2-1-205ENST00000546983 LCE2CQ5TA81 110 aa13.16□□□□□ -0.3
NKX2-1-205ENST00000546983 ACYP1P07311 99 aa13.11□□□□□ -0.31
NKX2-1-205ENST00000546983 RBM12B-AS1Q9P1G2 102 aa13.06□□□□□ -0.32
NKX2-1-205ENST00000546983 CXCL6P80162 114 aa13.05□□□□□ -0.32
NKX2-1-205ENST00000546983 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
NKX2-1-205ENST00000546983 NDUFS5O43920 106 aa13.04□□□□□ -0.32
NKX2-1-205ENST00000546983 MT1HP80294 61 aa13.04□□□□□ -0.32
NKX2-1-205ENST00000546983 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.33
NKX2-1-205ENST00000546983 Q8N9L7 120 aa13□□□□□ -0.33
NKX2-1-205ENST00000546983 SPINK7P58062 85 aa12.98□□□□□ -0.33
NKX2-1-205ENST00000546983 HCG22E2RYF7 251 aa12.97□□□□□ -0.33
NKX2-1-205ENST00000546983 M0R2T5 61 aa12.96□□□□□ -0.33
NKX2-1-205ENST00000546983 WFDC13Q8IUB5 93 aa12.96□□□□□ -0.33
NKX2-1-205ENST00000546983 FAM236DA0A1B0GTK5 79 aa12.95□□□□□ -0.34
NKX2-1-205ENST00000546983 FAM236CP0DP71 79 aa12.95□□□□□ -0.34
NKX2-1-205ENST00000546983 HRES1P13985 223 aa12.94□□□□□ -0.34
NKX2-1-205ENST00000546983 A0A1B0GV90 55 aa12.92□□□□□ -0.34
NKX2-1-205ENST00000546983 MPLKIPQ8TAP9 179 aa12.92□□□□□ -0.34
NKX2-1-205ENST00000546983 ATP5EP2Q5VTU8 51 aa12.91□□□□□ -0.34
NKX2-1-205ENST00000546983 TP53AIP1Q9HCN2 124 aa12.83□□□□□ -0.36
NKX2-1-205ENST00000546983 J3QR89 54 aa12.8□□□□□ -0.36
NKX2-1-205ENST00000546983 C7orf65Q6ZTY9 151 aa12.79□□□□□ -0.36
NKX2-1-205ENST00000546983 KRTAP10-6P60371 365 aaPredicted RBP12.75□□□□□ -0.37
NKX2-1-205ENST00000546983 LINC00643Q86TS7 51 aa12.74□□□□□ -0.37
NKX2-1-205ENST00000546983 Q5W150 140 aa12.73□□□□□ -0.37
NKX2-1-205ENST00000546983 LORP23490 312 aaPredicted RBP12.72□□□□□ -0.37
NKX2-1-205ENST00000546983 IGKV2D-30A0A075B6S6 120 aa12.71□□□□□ -0.37
NKX2-1-205ENST00000546983 IGKV2-30P06310 120 aa12.71□□□□□ -0.37
NKX2-1-205ENST00000546983 FLGP20930 4061 aaPredicted RBP12.7□□□□□ -0.38
NKX2-1-205ENST00000546983 HIST1H4AP62805 103 aaKnown RBP12.66□□□□□ -0.38
NKX2-1-205ENST00000546983 KRTAP9-2Q9BYQ4 174 aa12.65□□□□□ -0.38
NKX2-1-205ENST00000546983 LCE2DQ5TA82 110 aaPredicted RBP12.61□□□□□ -0.39
NKX2-1-205ENST00000546983 H1FX-AS1Q4G0G2 97 aa12.53□□□□□ -0.4
NKX2-1-205ENST00000546983 TRAV22A0A0B4J277 110 aa12.5□□□□□ -0.41
NKX2-1-205ENST00000546983 UQCRQO14949 82 aa12.49□□□□□ -0.41
NKX2-1-205ENST00000546983 ATOX1O00244 68 aa12.45□□□□□ -0.42
NKX2-1-205ENST00000546983 LOC101927531A0A1B0GV80 90 aa12.44□□□□□ -0.42
NKX2-1-205ENST00000546983 C4orf26Q17RF5 130 aa12.42□□□□□ -0.42
NKX2-1-205ENST00000546983 K7ERU9 68 aa12.41□□□□□ -0.42
NKX2-1-205ENST00000546983 A0A087WVE0 104 aa12.39□□□□□ -0.43
NKX2-1-205ENST00000546983 KRTAP9-8Q9BYQ0 159 aa12.38□□□□□ -0.43
NKX2-1-205ENST00000546983 CYP4F30PQ9H0H9 118 aa12.36□□□□□ -0.43
NKX2-1-205ENST00000546983 H0Y9P7 68 aa12.31□□□□□ -0.44
NKX2-1-205ENST00000546983 C1orf64Q8NEQ6 169 aa12.31□□□□□ -0.44
NKX2-1-205ENST00000546983 IMUPQ9GZP8 106 aa12.3□□□□□ -0.44
NKX2-1-205ENST00000546983 MP68P56378 58 aa12.26□□□□□ -0.45
NKX2-1-205ENST00000546983 MT2AP02795 61 aa12.24□□□□□ -0.45
NKX2-1-205ENST00000546983 SCGB1A1P11684 91 aa12.24□□□□□ -0.45
NKX2-1-205ENST00000546983 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
NKX2-1-205ENST00000546983 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
NKX2-1-205ENST00000546983 KRTAP10-10P60014 251 aa12.2□□□□□ -0.46
NKX2-1-205ENST00000546983 H3BPC8 53 aa12.18□□□□□ -0.46
NKX2-1-205ENST00000546983 S4R3F8 94 aa12.17□□□□□ -0.46
NKX2-1-205ENST00000546983 KRTAP3-1Q9BYR8 98 aa12.16□□□□□ -0.46
NKX2-1-205ENST00000546983 LINC00208Q96KT6 92 aa12.15□□□□□ -0.46
NKX2-1-205ENST00000546983 KRTAP9-6A0A140TA67 174 aa12.12□□□□□ -0.47
NKX2-1-205ENST00000546983 MT1FP04733 61 aa12.11□□□□□ -0.47
NKX2-1-205ENST00000546983 CSAG1Q6PB30 78 aa12.1□□□□□ -0.47
NKX2-1-205ENST00000546983 SMIM20Q8N5G0 67 aa12.09□□□□□ -0.47
NKX2-1-205ENST00000546983 A8MUN3 132 aa12.08□□□□□ -0.48
NKX2-1-205ENST00000546983 CRCT1Q9UGL9 99 aa12.06□□□□□ -0.48
NKX2-1-205ENST00000546983 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
NKX2-1-205ENST00000546983 LCA10Q71F78 164 aa12.01□□□□□ -0.49
NKX2-1-205ENST00000546983 KRTAP9-3Q9BYQ3 159 aa11.99□□□□□ -0.49
NKX2-1-205ENST00000546983 FAM236AA0A1B0GUQ0 79 aa11.94□□□□□ -0.5
NKX2-1-205ENST00000546983 FAM236BA0A1B0GV22 79 aa11.94□□□□□ -0.5
NKX2-1-205ENST00000546983 TRAV7A0A075B6U4 112 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms