RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 COX7BP24311 80 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 HINT1P49773 126 aaPredicted RBP0.96□□□□□ -2.26
SNHG1-224ENST00000545688 TSPEAR-AS2P59090 65 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 S100A7L2Q5SY68 101 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 TMEM170BQ5T4T1 132 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 Q6JHZ5 121 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 SLC51BQ86UW2 128 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 DEFB105AQ8NG35 78 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 CLEC2BQ92478 149 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 MAP1LC3CQ9BXW4 147 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 TRAPPC1Q9Y5R8 145 aa0.96□□□□□ -2.26
SNHG1-224ENST00000545688 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
SNHG1-224ENST00000545688 IGHV6-1A0A0B4J1U7 121 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 TRAV12-1A0A0B4J245 112 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 MYMXA0A1B0GTQ4 84 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 LINC00313P59037 77 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 IFITM2Q01629 132 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 RHEBQ15382 184 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 ADIRFQ15847 76 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 NDUFA5Q16718 116 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 OCIAD2Q56VL3 154 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 SPANXDQ9BXN6 97 aa0.95□□□□□ -2.26
SNHG1-224ENST00000545688 WFDC13Q8IUB5 93 aa0.94□□□□□ -2.26
SNHG1-224ENST00000545688 SPANXCQ9NY87 97 aa0.94□□□□□ -2.26
SNHG1-224ENST00000545688 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 TRAV13-2A0A0B4J235 113 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 A0A1B0GU33 70 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 LEPROTO15243 131 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 LINC00614P0C842 121 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 S100A1P23297 94 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 MT4P47944 62 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 COMMD7Q86VX2 200 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 TCTE3Q8IZS6 198 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 LINC00308Q8TCZ7 52 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 LINC00472Q9H8W2 130 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 SS18L2Q9UHA2 77 aa0.93□□□□□ -2.26
SNHG1-224ENST00000545688 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
SNHG1-224ENST00000545688 A0A0B4J2C4 111 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 J3QQQ9 107 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 PEA15Q15121 130 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 TEN1Q86WV5 123 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 MIEN1Q9BRT3 115 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 CRIPTQ9P021 101 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 PRO2289Q9P1D8 64 aa0.92□□□□□ -2.26
SNHG1-224ENST00000545688 A0A087WSZ3 146 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 TIMM17BO60830 172 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 NPC2P61916 151 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 PMCHL1Q16048 86 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 LINC00575Q6W349 94 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 OR13C6PQ8NH95 151 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 C18orf32Q8TCD1 76 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 PPDPFLQ8WWR9 84 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 IMUPQ9GZP8 106 aa0.91□□□□□ -2.26
SNHG1-224ENST00000545688 NHP2Q9NX24 153 aaKnown RBP0.91□□□□□ -2.26
SNHG1-224ENST00000545688 F8WEM9 126 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 H3BUT2 72 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 APOC3P02656 99 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 MT-ND4LP03901 98 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 C3orf79P0CE67 100 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 S100PP25815 95 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 CLLU1Q5K131 121 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 Q6ZQY7 126 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 SVBPQ8N300 66 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 RAB37Q96AX2 223 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 IFI27L1Q96BM0 104 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 SMCO4Q9NRQ5 59 aa0.9□□□□□ -2.27
SNHG1-224ENST00000545688 FAM236AA0A1B0GUQ0 79 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 FAM236BA0A1B0GV22 79 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 hADV29S1A0JD25 119 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 TMEM218A2RU14 115 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 C8orf87E5RJ46 101 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 H0Y8G0 127 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 S100A6P06703 90 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 KRTAP19-7Q3SYF9 63 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.89□□□□□ -2.27
SNHG1-224ENST00000545688 SLC7A5P1Q8MH63 180 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 SEC11CQ9BY50 192 aa0.89□□□□□ -2.27
SNHG1-224ENST00000545688 IGKV3D-7A0A0C4DH55 119 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 MT1EP04732 61 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 PLNP26678 52 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 S100A2P29034 98 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 RBM3P98179 157 aaKnown RBP0.88□□□□□ -2.27
SNHG1-224ENST00000545688 FABP9Q0Z7S8 132 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 CSAG1Q6PB30 78 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 PRR15Q8IV56 129 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 CHCHD1Q96BP2 118 aaKnown RBP0.88□□□□□ -2.27
SNHG1-224ENST00000545688 SIGMAR1Q99720 223 aa0.88□□□□□ -2.27
SNHG1-224ENST00000545688 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
SNHG1-224ENST00000545688 MT1GP13640 62 aa0.87□□□□□ -2.27
SNHG1-224ENST00000545688 LCA10Q71F78 164 aa0.87□□□□□ -2.27
SNHG1-224ENST00000545688 CYSTM1Q9H1C7 97 aa0.87□□□□□ -2.27
SNHG1-224ENST00000545688 TRBV7-4A0A0J9YYF1 115 aa0.86□□□□□ -2.27
SNHG1-224ENST00000545688 DPM2O94777 84 aa0.86□□□□□ -2.27
SNHG1-224ENST00000545688 IGKCP01834 107 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms