RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FABP2P12104 132 aa6.82□□□□□ -1.32
RTN3-214ENST00000545432 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
RTN3-214ENST00000545432 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
RTN3-214ENST00000545432 CEND1Q8N111 149 aa6.81□□□□□ -1.32
RTN3-214ENST00000545432 A6NN06 94 aa6.8□□□□□ -1.32
RTN3-214ENST00000545432 H3BQ85 93 aa6.79□□□□□ -1.32
RTN3-214ENST00000545432 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
RTN3-214ENST00000545432 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
RTN3-214ENST00000545432 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
RTN3-214ENST00000545432 DNAL4O96015 105 aa6.78□□□□□ -1.32
RTN3-214ENST00000545432 MT1BP07438 61 aa6.76□□□□□ -1.33
RTN3-214ENST00000545432 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
RTN3-214ENST00000545432 ANKRD29Q8N6D5 301 aa6.76□□□□□ -1.33
RTN3-214ENST00000545432 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
RTN3-214ENST00000545432 TRIAP1O43715 76 aa6.75□□□□□ -1.33
RTN3-214ENST00000545432 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
RTN3-214ENST00000545432 COX6CP09669 75 aa6.73□□□□□ -1.33
RTN3-214ENST00000545432 FXYD2P54710 66 aa6.73□□□□□ -1.33
RTN3-214ENST00000545432 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
RTN3-214ENST00000545432 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
RTN3-214ENST00000545432 PSMB2P49721 201 aa6.72□□□□□ -1.33
RTN3-214ENST00000545432 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
RTN3-214ENST00000545432 HSD52Q0P140 79 aa6.7□□□□□ -1.34
RTN3-214ENST00000545432 TRACP01848 142 aa6.69□□□□□ -1.34
RTN3-214ENST00000545432 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
RTN3-214ENST00000545432 A0A1B0GV72 72 aa6.68□□□□□ -1.34
RTN3-214ENST00000545432 CCKP06307 115 aa6.68□□□□□ -1.34
RTN3-214ENST00000545432 K7ERJ3 54 aa6.65□□□□□ -1.34
RTN3-214ENST00000545432 UBE2V1Q13404 147 aa6.65□□□□□ -1.34
RTN3-214ENST00000545432 J3KT08 172 aa6.64□□□□□ -1.35
RTN3-214ENST00000545432 Q5VV11 94 aa6.64□□□□□ -1.35
RTN3-214ENST00000545432 C21orf62-AS1Q17RA5 79 aa6.63□□□□□ -1.35
RTN3-214ENST00000545432 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
RTN3-214ENST00000545432 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
RTN3-214ENST00000545432 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
RTN3-214ENST00000545432 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
RTN3-214ENST00000545432 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
RTN3-214ENST00000545432 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
RTN3-214ENST00000545432 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
RTN3-214ENST00000545432 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
RTN3-214ENST00000545432 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
RTN3-214ENST00000545432 NDUFB1O75438 58 aa6.56□□□□□ -1.36
RTN3-214ENST00000545432 C9JAW5 83 aa6.55□□□□□ -1.36
RTN3-214ENST00000545432 LYRM7Q5U5X0 104 aa6.55□□□□□ -1.36
RTN3-214ENST00000545432 Q6ZQT0 140 aa6.54□□□□□ -1.36
RTN3-214ENST00000545432 Q6ZVQ6 151 aa6.53□□□□□ -1.36
RTN3-214ENST00000545432 BAALC-AS2P0C853 105 aa6.52□□□□□ -1.37
RTN3-214ENST00000545432 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
RTN3-214ENST00000545432 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
RTN3-214ENST00000545432 A0A1B0GW54 56 aa6.5□□□□□ -1.37
RTN3-214ENST00000545432 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
RTN3-214ENST00000545432 PDE6GP18545 87 aa6.47□□□□□ -1.37
RTN3-214ENST00000545432 ATXN8Q156A1 80 aa6.47□□□□□ -1.37
RTN3-214ENST00000545432 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
RTN3-214ENST00000545432 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.38
RTN3-214ENST00000545432 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.38
RTN3-214ENST00000545432 M0R143 59 aa6.46□□□□□ -1.38
RTN3-214ENST00000545432 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
RTN3-214ENST00000545432 SPRR2EP22531 72 aa6.45□□□□□ -1.38
RTN3-214ENST00000545432 SPRR2BP35325 72 aa6.45□□□□□ -1.38
RTN3-214ENST00000545432 SPRR2AP35326 72 aa6.45□□□□□ -1.38
RTN3-214ENST00000545432 PRR15Q8IV56 129 aa6.45□□□□□ -1.38
RTN3-214ENST00000545432 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
RTN3-214ENST00000545432 TMEM254Q8TBM7 123 aa6.44□□□□□ -1.38
RTN3-214ENST00000545432 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
RTN3-214ENST00000545432 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
RTN3-214ENST00000545432 C5orf47Q569G3 176 aa6.42□□□□□ -1.38
RTN3-214ENST00000545432 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
RTN3-214ENST00000545432 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
RTN3-214ENST00000545432 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
RTN3-214ENST00000545432 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
RTN3-214ENST00000545432 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
RTN3-214ENST00000545432 Q5W150 140 aa6.39□□□□□ -1.39
RTN3-214ENST00000545432 NREPQ16612 68 aa6.38□□□□□ -1.39
RTN3-214ENST00000545432 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
RTN3-214ENST00000545432 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
RTN3-214ENST00000545432 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
RTN3-214ENST00000545432 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
RTN3-214ENST00000545432 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
RTN3-214ENST00000545432 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
RTN3-214ENST00000545432 hDV103S1A0JD37 113 aa6.34□□□□□ -1.39
RTN3-214ENST00000545432 IMUPQ9GZP8 106 aa6.31□□□□□ -1.4
RTN3-214ENST00000545432 NDUFS5O43920 106 aa6.3□□□□□ -1.4
RTN3-214ENST00000545432 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
RTN3-214ENST00000545432 S4R3F8 94 aa6.3□□□□□ -1.4
RTN3-214ENST00000545432 LCA10Q71F78 164 aa6.29□□□□□ -1.4
RTN3-214ENST00000545432 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
RTN3-214ENST00000545432 H3BT86 120 aa6.28□□□□□ -1.4
RTN3-214ENST00000545432 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
RTN3-214ENST00000545432 K7EQZ3 153 aa6.27□□□□□ -1.41
RTN3-214ENST00000545432 BATFQ16520 125 aa6.26□□□□□ -1.41
RTN3-214ENST00000545432 BPY2O14599 106 aa6.25□□□□□ -1.41
RTN3-214ENST00000545432 SPRR2DP22532 72 aa6.24□□□□□ -1.41
RTN3-214ENST00000545432 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
RTN3-214ENST00000545432 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
RTN3-214ENST00000545432 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
RTN3-214ENST00000545432 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
RTN3-214ENST00000545432 A0A1W2PPM0 123 aa6.2□□□□□ -1.42
RTN3-214ENST00000545432 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
RTN3-214ENST00000545432 MT1XP80297 61 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms