RNA–Protein interactions for RNA: ENST00000544706.1

PTPRO-211, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 2

Gene PTPRO, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-211ENST00000544706 CFAP47Q6ZTR5 3102 aa1.57□□□□□ -2.16
PTPRO-211ENST00000544706 CRYBG3Q68DQ2 2970 aa1.57□□□□□ -2.16
PTPRO-211ENST00000544706 FN1P02751 2386 aaKnown RBP1.57□□□□□ -2.16
PTPRO-211ENST00000544706 ITPR1Q14643 2758 aa1.56□□□□□ -2.16
PTPRO-211ENST00000544706 CACNA1HO95180 2353 aa1.56□□□□□ -2.16
PTPRO-211ENST00000544706 TRIOO75962 3097 aa1.55□□□□□ -2.16
PTPRO-211ENST00000544706 BOD1L1Q8NFC6 3051 aa1.55□□□□□ -2.16
PTPRO-211ENST00000544706 C2CD3Q4AC94 2353 aa1.55□□□□□ -2.16
PTPRO-211ENST00000544706 FRYQ5TBA9 3013 aa1.55□□□□□ -2.16
PTPRO-211ENST00000544706 ZNF462Q96JM2 2506 aa1.55□□□□□ -2.16
PTPRO-211ENST00000544706 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
PTPRO-211ENST00000544706 FAM208BQ5VWN6 2430 aa1.54□□□□□ -2.16
PTPRO-211ENST00000544706 DNAH12Q6ZR08 3092 aa1.54□□□□□ -2.16
PTPRO-211ENST00000544706 MKI67P46013 3256 aaKnown RBP1.54□□□□□ -2.16
PTPRO-211ENST00000544706 VWFP04275 2813 aa1.53□□□□□ -2.16
PTPRO-211ENST00000544706 DMDP11532 3685 aa1.53□□□□□ -2.16
PTPRO-211ENST00000544706 GVINP1Q7Z2Y8 2422 aa1.53□□□□□ -2.16
PTPRO-211ENST00000544706 SRRM2Q9UQ35 2752 aaKnown RBP1.53□□□□□ -2.16
PTPRO-211ENST00000544706 TRANK1O15050 2925 aa1.53□□□□□ -2.17
PTPRO-211ENST00000544706 UBR5O95071 2799 aaPredicted RBP1.53□□□□□ -2.17
PTPRO-211ENST00000544706 REV3LO60673 3130 aa1.52□□□□□ -2.17
PTPRO-211ENST00000544706 LRBAP50851 2863 aa1.52□□□□□ -2.17
PTPRO-211ENST00000544706 ANKHD1Q8IWZ3 2542 aaKnown RBP1.52□□□□□ -2.17
PTPRO-211ENST00000544706 USP34Q70CQ2 3546 aa1.52□□□□□ -2.17
PTPRO-211ENST00000544706 ROS1P08922 2347 aa1.52□□□□□ -2.17
PTPRO-211ENST00000544706 CSPG4Q6UVK1 2322 aa1.52□□□□□ -2.17
PTPRO-211ENST00000544706 UNC80Q8N2C7 3258 aa1.51□□□□□ -2.17
PTPRO-211ENST00000544706 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
PTPRO-211ENST00000544706 CHD9Q3L8U1 2897 aa1.51□□□□□ -2.17
PTPRO-211ENST00000544706 NF1P21359 2839 aa1.51□□□□□ -2.17
PTPRO-211ENST00000544706 CELSR1Q9NYQ6 3014 aa1.5□□□□□ -2.17
PTPRO-211ENST00000544706 XIRP2A4UGR9 3374 aa1.5□□□□□ -2.17
PTPRO-211ENST00000544706 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
PTPRO-211ENST00000544706 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
PTPRO-211ENST00000544706 DCHS1Q96JQ0 3298 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 ZFHX4Q86UP3 3567 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 COL12A1Q99715 3063 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 JMJD1CQ15652 2540 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 DMXL1Q9Y485 3027 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 TACC2O95359 2948 aa1.49□□□□□ -2.17
PTPRO-211ENST00000544706 C5orf42Q9H799 3197 aa1.48□□□□□ -2.17
PTPRO-211ENST00000544706 TNP1P09430 55 aa1.48□□□□□ -2.17
PTPRO-211ENST00000544706 NCOR2Q9Y618 2525 aa1.48□□□□□ -2.17
PTPRO-211ENST00000544706 COL6A5A8TX70 2615 aa1.48□□□□□ -2.17
PTPRO-211ENST00000544706 AKAP9Q99996 3911 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 HTTP42858 3142 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 CREBBPQ92793 2442 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 DMXL2Q8TDJ6 3036 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 F8P00451 2351 aa1.47□□□□□ -2.17
PTPRO-211ENST00000544706 SPG11Q96JI7 2443 aa1.46□□□□□ -2.18
PTPRO-211ENST00000544706 CCDC168Q8NDH2 2452 aa1.46□□□□□ -2.18
PTPRO-211ENST00000544706 SPEGQ15772 3267 aa1.46□□□□□ -2.18
PTPRO-211ENST00000544706 C9orf92A6NGG3 77 aa1.45□□□□□ -2.18
PTPRO-211ENST00000544706 NIPBLQ6KC79 2804 aaeCLIP1.45□□□□□ -2.18
PTPRO-211ENST00000544706 TEX15Q9BXT5 2789 aa1.45□□□□□ -2.18
PTPRO-211ENST00000544706 DNAH14Q0VDD8 3507 aa1.45□□□□□ -2.18
PTPRO-211ENST00000544706 EP400Q96L91 3159 aa1.45□□□□□ -2.18
PTPRO-211ENST00000544706 MEGF8Q7Z7M0 2845 aa1.44□□□□□ -2.18
PTPRO-211ENST00000544706 ABCA2Q9BZC7 2435 aa1.44□□□□□ -2.18
PTPRO-211ENST00000544706 WDFY3Q8IZQ1 3526 aa1.44□□□□□ -2.18
PTPRO-211ENST00000544706 LAMA1P25391 3075 aa1.43□□□□□ -2.18
PTPRO-211ENST00000544706 FREM2Q5SZK8 3169 aa1.43□□□□□ -2.18
PTPRO-211ENST00000544706 DCHS2Q6V1P9 2916 aa1.43□□□□□ -2.18
PTPRO-211ENST00000544706 CSMD1Q96PZ7 3565 aa1.42□□□□□ -2.18
PTPRO-211ENST00000544706 NBASA2RRP1 2371 aa1.42□□□□□ -2.18
PTPRO-211ENST00000544706 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
PTPRO-211ENST00000544706 NBPF19A0A087WUL8 3843 aa1.42□□□□□ -2.18
PTPRO-211ENST00000544706 SPENQ96T58 3664 aaKnown RBP1.42□□□□□ -2.18
PTPRO-211ENST00000544706 RIF1Q5UIP0 2472 aaKnown RBP1.42□□□□□ -2.18
PTPRO-211ENST00000544706 CELSR3Q9NYQ7 3312 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 LAMA5O15230 3695 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 ITPR3Q14573 2671 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 ATMQ13315 3056 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 PKD1L2Q7Z442 2459 aa1.41□□□□□ -2.18
PTPRO-211ENST00000544706 APCP25054 2843 aa1.4□□□□□ -2.18
PTPRO-211ENST00000544706 LOC400499M0QZD8 3231 aa1.4□□□□□ -2.19
PTPRO-211ENST00000544706 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.19
PTPRO-211ENST00000544706 COL7A1Q02388 2944 aa1.39□□□□□ -2.19
PTPRO-211ENST00000544706 UTP20O75691 2785 aaKnown RBP1.39□□□□□ -2.19
PTPRO-211ENST00000544706 SETXQ7Z333 2677 aaKnown RBP1.39□□□□□ -2.19
PTPRO-211ENST00000544706 CEP290O15078 2479 aa1.39□□□□□ -2.19
PTPRO-211ENST00000544706 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
PTPRO-211ENST00000544706 SONP18583 2426 aaKnown RBP1.38□□□□□ -2.19
PTPRO-211ENST00000544706 LAMA3Q16787 3333 aa1.38□□□□□ -2.19
PTPRO-211ENST00000544706 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
PTPRO-211ENST00000544706 SMR3AQ99954 134 aa1.38□□□□□ -2.19
PTPRO-211ENST00000544706 HECTD1Q9ULT8 2610 aa1.38□□□□□ -2.19
PTPRO-211ENST00000544706 USP9XQ93008 2570 aaPredicted RBP1.38□□□□□ -2.19
PTPRO-211ENST00000544706 TGP01266 2768 aa1.37□□□□□ -2.19
PTPRO-211ENST00000544706 TENM4Q6N022 2769 aa1.37□□□□□ -2.19
PTPRO-211ENST00000544706 SPTAN1Q13813 2472 aaKnown RBP1.37□□□□□ -2.19
PTPRO-211ENST00000544706 RELNP78509 3460 aa1.36□□□□□ -2.19
PTPRO-211ENST00000544706 TLN1Q9Y490 2541 aaKnown RBP1.36□□□□□ -2.19
PTPRO-211ENST00000544706 PDZD2O15018 2839 aa1.36□□□□□ -2.19
PTPRO-211ENST00000544706 VCANP13611 3396 aa1.36□□□□□ -2.19
PTPRO-211ENST00000544706 SMG1Q96Q15 3661 aaKnown RBP1.36□□□□□ -2.19
PTPRO-211ENST00000544706 USP9YO00507 2555 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms