RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PRR4Q16378 134 aa10.4□□□□□ -0.74
SCARB1-208ENST00000544327 KRTAP10-1P60331 282 aa10.38□□□□□ -0.75
SCARB1-208ENST00000544327 KRTAP21-3Q3LHN1 58 aa10.38□□□□□ -0.75
SCARB1-208ENST00000544327 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
SCARB1-208ENST00000544327 Q1T7F1 81 aa10.37□□□□□ -0.75
SCARB1-208ENST00000544327 TGP01266 2768 aa10.37□□□□□ -0.75
SCARB1-208ENST00000544327 A0A087X002 238 aa10.36□□□□□ -0.75
SCARB1-208ENST00000544327 NOTCH2NLQ7Z3S9 236 aa10.36□□□□□ -0.75
SCARB1-208ENST00000544327 IGLV7-46A0A075B6I9 117 aa10.35□□□□□ -0.75
SCARB1-208ENST00000544327 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
SCARB1-208ENST00000544327 NDUFS5O43920 106 aa10.33□□□□□ -0.76
SCARB1-208ENST00000544327 PKD1P98161 4303 aa10.32□□□□□ -0.76
SCARB1-208ENST00000544327 C8orf87E5RJ46 101 aa10.32□□□□□ -0.76
SCARB1-208ENST00000544327 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
SCARB1-208ENST00000544327 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
SCARB1-208ENST00000544327 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
SCARB1-208ENST00000544327 FAT2Q9NYQ8 4349 aa10.3□□□□□ -0.76
SCARB1-208ENST00000544327 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
SCARB1-208ENST00000544327 PCOTHQ58A44 107 aa10.25□□□□□ -0.77
SCARB1-208ENST00000544327 KRTAP1-4P0C5Y4 121 aa10.24□□□□□ -0.77
SCARB1-208ENST00000544327 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
SCARB1-208ENST00000544327 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
SCARB1-208ENST00000544327 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
SCARB1-208ENST00000544327 COA5Q86WW8 74 aa10.2□□□□□ -0.78
SCARB1-208ENST00000544327 Q5W150 140 aa10.19□□□□□ -0.78
SCARB1-208ENST00000544327 LINC00313P59037 77 aa10.18□□□□□ -0.78
SCARB1-208ENST00000544327 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
SCARB1-208ENST00000544327 LIMD2Q9BT23 127 aa10.17□□□□□ -0.78
SCARB1-208ENST00000544327 BRK1Q8WUW1 75 aa10.14□□□□□ -0.79
SCARB1-208ENST00000544327 FAM229AH3BQW9 127 aa10.11□□□□□ -0.79
SCARB1-208ENST00000544327 PSPHP1O15172 72 aa10.11□□□□□ -0.79
SCARB1-208ENST00000544327 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
SCARB1-208ENST00000544327 VPS13BQ7Z7G8 4022 aa10.08□□□□□ -0.8
SCARB1-208ENST00000544327 A8MUN3 132 aa10.08□□□□□ -0.8
SCARB1-208ENST00000544327 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
SCARB1-208ENST00000544327 HRES1P13985 223 aa10.07□□□□□ -0.8
SCARB1-208ENST00000544327 SPINK1P00995 79 aa10.07□□□□□ -0.8
SCARB1-208ENST00000544327 Q5VV11 94 aa10.07□□□□□ -0.8
SCARB1-208ENST00000544327 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
SCARB1-208ENST00000544327 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
SCARB1-208ENST00000544327 SACSQ9NZJ4 4579 aa10.05□□□□□ -0.8
SCARB1-208ENST00000544327 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
SCARB1-208ENST00000544327 PMAIP1Q13794 54 aa10.02□□□□□ -0.81
SCARB1-208ENST00000544327 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
SCARB1-208ENST00000544327 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
SCARB1-208ENST00000544327 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
SCARB1-208ENST00000544327 Q75L30 129 aa9.98□□□□□ -0.81
SCARB1-208ENST00000544327 A0A1B0GVY2 172 aa9.96□□□□□ -0.81
SCARB1-208ENST00000544327 ACYP2P14621 99 aa9.96□□□□□ -0.81
SCARB1-208ENST00000544327 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.81
SCARB1-208ENST00000544327 DMAC1Q96GE9 116 aa9.96□□□□□ -0.81
SCARB1-208ENST00000544327 LINC00304Q8N9R0 145 aa9.95□□□□□ -0.82
SCARB1-208ENST00000544327 DYNC1H1Q14204 4646 aaKnown RBP9.93□□□□□ -0.82
SCARB1-208ENST00000544327 PRR26Q8N8Z3 221 aa9.93□□□□□ -0.82
SCARB1-208ENST00000544327 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
SCARB1-208ENST00000544327 CHKB-CPT1BH3BT56 60 aa9.92□□□□□ -0.82
SCARB1-208ENST00000544327 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
SCARB1-208ENST00000544327 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
SCARB1-208ENST00000544327 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
SCARB1-208ENST00000544327 APOBP04114 4563 aaKnown RBP9.82□□□□□ -0.84
SCARB1-208ENST00000544327 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
SCARB1-208ENST00000544327 IGKV2D-30A0A075B6S6 120 aa9.8□□□□□ -0.84
SCARB1-208ENST00000544327 A6NED7 52 aa9.79□□□□□ -0.84
SCARB1-208ENST00000544327 LCA10Q71F78 164 aa9.77□□□□□ -0.85
SCARB1-208ENST00000544327 A8MU10 97 aa9.76□□□□□ -0.85
SCARB1-208ENST00000544327 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
SCARB1-208ENST00000544327 RYR2Q92736 4967 aa9.74□□□□□ -0.85
SCARB1-208ENST00000544327 C7orf65Q6ZTY9 151 aa9.74□□□□□ -0.85
SCARB1-208ENST00000544327 A8MUU9 505 aa9.72□□□□□ -0.85
SCARB1-208ENST00000544327 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
SCARB1-208ENST00000544327 FAT1Q14517 4588 aa9.69□□□□□ -0.86
SCARB1-208ENST00000544327 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
SCARB1-208ENST00000544327 SPINK7P58062 85 aa9.68□□□□□ -0.86
SCARB1-208ENST00000544327 C9orf92A6NGG3 77 aa9.61□□□□□ -0.87
SCARB1-208ENST00000544327 KTN1-AS1Q86SY8 53 aa9.61□□□□□ -0.87
SCARB1-208ENST00000544327 A0A1B0GU69 56 aa9.6□□□□□ -0.87
SCARB1-208ENST00000544327 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.88
SCARB1-208ENST00000544327 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
SCARB1-208ENST00000544327 Q8N1X5 172 aa9.54□□□□□ -0.88
SCARB1-208ENST00000544327 KMT2CQ8NEZ4 4911 aaKnown RBP9.54□□□□□ -0.88
SCARB1-208ENST00000544327 A6NN06 94 aa9.52□□□□□ -0.89
SCARB1-208ENST00000544327 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
SCARB1-208ENST00000544327 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
SCARB1-208ENST00000544327 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.89
SCARB1-208ENST00000544327 Q5VSD8 79 aa9.44□□□□□ -0.9
SCARB1-208ENST00000544327 TNXBP22105 4242 aa9.44□□□□□ -0.9
SCARB1-208ENST00000544327 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
SCARB1-208ENST00000544327 UQCR11O14957 56 aa9.43□□□□□ -0.9
SCARB1-208ENST00000544327 KRTAP3-1Q9BYR8 98 aa9.43□□□□□ -0.9
SCARB1-208ENST00000544327 HSPG2P98160 4391 aa9.4□□□□□ -0.91
SCARB1-208ENST00000544327 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
SCARB1-208ENST00000544327 COX6B2Q6YFQ2 88 aa9.34□□□□□ -0.91
SCARB1-208ENST00000544327 RYR3Q15413 4870 aa9.33□□□□□ -0.92
SCARB1-208ENST00000544327 RYR1P21817 5038 aa9.33□□□□□ -0.92
SCARB1-208ENST00000544327 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
SCARB1-208ENST00000544327 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
SCARB1-208ENST00000544327 H3BS24 57 aa9.28□□□□□ -0.92
SCARB1-208ENST00000544327 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
SCARB1-208ENST00000544327 XP32Q5T750 250 aa9.24□□□□□ -0.93
SCARB1-208ENST00000544327 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms