RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
HCFC2-202ENST00000544223 MMP24-AS1A0A0U1RRL7 71 aa7.86□□□□□ -1.15
HCFC2-202ENST00000544223 C5orf47Q569G3 176 aa7.85□□□□□ -1.15
HCFC2-202ENST00000544223 TNXBP22105 4242 aa7.85□□□□□ -1.15
HCFC2-202ENST00000544223 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
HCFC2-202ENST00000544223 NDUFB1O75438 58 aa7.84□□□□□ -1.15
HCFC2-202ENST00000544223 OXTP01178 125 aa7.84□□□□□ -1.15
HCFC2-202ENST00000544223 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
HCFC2-202ENST00000544223 Q5VSD8 79 aa7.83□□□□□ -1.16
HCFC2-202ENST00000544223 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
HCFC2-202ENST00000544223 CDK2AP2O75956 126 aa7.82□□□□□ -1.16
HCFC2-202ENST00000544223 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
HCFC2-202ENST00000544223 CD164Q04900 197 aa7.81□□□□□ -1.16
HCFC2-202ENST00000544223 C8orf17Q9NRJ1 99 aa7.81□□□□□ -1.16
HCFC2-202ENST00000544223 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
HCFC2-202ENST00000544223 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
HCFC2-202ENST00000544223 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
HCFC2-202ENST00000544223 FAT3Q8TDW7 4589 aa7.8□□□□□ -1.16
HCFC2-202ENST00000544223 FAM229AH3BQW9 127 aa7.79□□□□□ -1.16
HCFC2-202ENST00000544223 J3QL48 77 aa7.79□□□□□ -1.16
HCFC2-202ENST00000544223 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
HCFC2-202ENST00000544223 H7BZZ5 65 aa7.78□□□□□ -1.16
HCFC2-202ENST00000544223 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
HCFC2-202ENST00000544223 NDUFS5O43920 106 aa7.78□□□□□ -1.16
HCFC2-202ENST00000544223 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
HCFC2-202ENST00000544223 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
HCFC2-202ENST00000544223 Q5XG85 94 aa7.76□□□□□ -1.17
HCFC2-202ENST00000544223 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
HCFC2-202ENST00000544223 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
HCFC2-202ENST00000544223 C4orf26Q17RF5 130 aa7.73□□□□□ -1.17
HCFC2-202ENST00000544223 SPINK1P00995 79 aa7.72□□□□□ -1.17
HCFC2-202ENST00000544223 NDUFC1O43677 76 aa7.72□□□□□ -1.17
HCFC2-202ENST00000544223 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.18
HCFC2-202ENST00000544223 Q8N1X5 172 aa7.7□□□□□ -1.18
HCFC2-202ENST00000544223 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
HCFC2-202ENST00000544223 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
HCFC2-202ENST00000544223 ABCA13Q86UQ4 5058 aa7.7□□□□□ -1.18
HCFC2-202ENST00000544223 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
HCFC2-202ENST00000544223 H0Y9P7 68 aa7.69□□□□□ -1.18
HCFC2-202ENST00000544223 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
HCFC2-202ENST00000544223 ATP5EP56381 51 aaPredicted RBP7.68□□□□□ -1.18
HCFC2-202ENST00000544223 LINC00313P59037 77 aa7.68□□□□□ -1.18
HCFC2-202ENST00000544223 PRR4Q16378 134 aa7.67□□□□□ -1.18
HCFC2-202ENST00000544223 Q5W150 140 aa7.67□□□□□ -1.18
HCFC2-202ENST00000544223 C9orf92A6NGG3 77 aa7.66□□□□□ -1.18
HCFC2-202ENST00000544223 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
HCFC2-202ENST00000544223 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
HCFC2-202ENST00000544223 ZCCHC13Q8WW36 166 aaKnown RBP7.62□□□□□ -1.19
HCFC2-202ENST00000544223 MP68P56378 58 aa7.62□□□□□ -1.19
HCFC2-202ENST00000544223 C1orf64Q8NEQ6 169 aa7.62□□□□□ -1.19
HCFC2-202ENST00000544223 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
HCFC2-202ENST00000544223 SPAG11AQ6PDA7 123 aa7.6□□□□□ -1.19
HCFC2-202ENST00000544223 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
HCFC2-202ENST00000544223 SEC61GP60059 68 aa7.59□□□□□ -1.19
HCFC2-202ENST00000544223 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
HCFC2-202ENST00000544223 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
HCFC2-202ENST00000544223 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
HCFC2-202ENST00000544223 HERC2O95714 4834 aa7.56□□□□□ -1.2
HCFC2-202ENST00000544223 LPAP08519 4548 aa7.55□□□□□ -1.2
HCFC2-202ENST00000544223 TP53AIP1Q9HCN2 124 aa7.55□□□□□ -1.2
HCFC2-202ENST00000544223 MT1HL1P0DM35 61 aa7.53□□□□□ -1.2
HCFC2-202ENST00000544223 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
HCFC2-202ENST00000544223 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
HCFC2-202ENST00000544223 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
HCFC2-202ENST00000544223 PRO0628Q9UI54 55 aa7.53□□□□□ -1.2
HCFC2-202ENST00000544223 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
HCFC2-202ENST00000544223 LRP2P98164 4655 aa7.47□□□□□ -1.21
HCFC2-202ENST00000544223 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
HCFC2-202ENST00000544223 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
HCFC2-202ENST00000544223 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
HCFC2-202ENST00000544223 H3BPC8 53 aa7.43□□□□□ -1.22
HCFC2-202ENST00000544223 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
HCFC2-202ENST00000544223 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
HCFC2-202ENST00000544223 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
HCFC2-202ENST00000544223 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
HCFC2-202ENST00000544223 IGLV7-46A0A075B6I9 117 aa7.38□□□□□ -1.23
HCFC2-202ENST00000544223 HERC1Q15751 4861 aa7.37□□□□□ -1.23
HCFC2-202ENST00000544223 HRES1P13985 223 aa7.36□□□□□ -1.23
HCFC2-202ENST00000544223 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
HCFC2-202ENST00000544223 A8MUU9 505 aa7.35□□□□□ -1.23
HCFC2-202ENST00000544223 Q1T7F1 81 aa7.33□□□□□ -1.24
HCFC2-202ENST00000544223 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
HCFC2-202ENST00000544223 H3BS24 57 aa7.31□□□□□ -1.24
HCFC2-202ENST00000544223 XP32Q5T750 250 aa7.3□□□□□ -1.24
HCFC2-202ENST00000544223 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
HCFC2-202ENST00000544223 COA5Q86WW8 74 aa7.27□□□□□ -1.25
HCFC2-202ENST00000544223 MUC2Q02817 5179 aa7.26□□□□□ -1.25
HCFC2-202ENST00000544223 Q75L30 129 aa7.25□□□□□ -1.25
HCFC2-202ENST00000544223 SPINK7P58062 85 aa7.24□□□□□ -1.25
HCFC2-202ENST00000544223 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
HCFC2-202ENST00000544223 V9GYY9 64 aa7.24□□□□□ -1.25
HCFC2-202ENST00000544223 PSPHP1O15172 72 aa7.21□□□□□ -1.26
HCFC2-202ENST00000544223 ATP11AUNQ6ZP68 121 aa7.21□□□□□ -1.26
HCFC2-202ENST00000544223 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
HCFC2-202ENST00000544223 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
HCFC2-202ENST00000544223 A8MUN3 132 aa7.16□□□□□ -1.26
HCFC2-202ENST00000544223 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
HCFC2-202ENST00000544223 ACYP2P14621 99 aa7.13□□□□□ -1.27
HCFC2-202ENST00000544223 Q5VV11 94 aa7.12□□□□□ -1.27
HCFC2-202ENST00000544223 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms