RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 LINC00643Q86TS7 51 aa6.35□□□□□ -1.39
GABPB1-206ENST00000543881 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
GABPB1-206ENST00000543881 ATOX1O00244 68 aa6.34□□□□□ -1.39
GABPB1-206ENST00000543881 TRACP01848 142 aa6.34□□□□□ -1.4
GABPB1-206ENST00000543881 LINC00575Q6W349 94 aa6.34□□□□□ -1.4
GABPB1-206ENST00000543881 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
GABPB1-206ENST00000543881 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
GABPB1-206ENST00000543881 CFC1P0CG37 223 aa6.32□□□□□ -1.4
GABPB1-206ENST00000543881 SEC61GP60059 68 aa6.32□□□□□ -1.4
GABPB1-206ENST00000543881 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
GABPB1-206ENST00000543881 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
GABPB1-206ENST00000543881 Q6ZQY7 126 aa6.3□□□□□ -1.4
GABPB1-206ENST00000543881 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-206ENST00000543881 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
GABPB1-206ENST00000543881 F8WEM9 126 aa6.28□□□□□ -1.4
GABPB1-206ENST00000543881 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
GABPB1-206ENST00000543881 V9GYY9 64 aa6.28□□□□□ -1.4
GABPB1-206ENST00000543881 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
GABPB1-206ENST00000543881 Q6JHZ5 121 aa6.26□□□□□ -1.41
GABPB1-206ENST00000543881 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
GABPB1-206ENST00000543881 CLEC2BQ92478 149 aa6.26□□□□□ -1.41
GABPB1-206ENST00000543881 USH2AO75445 5202 aa6.24□□□□□ -1.41
GABPB1-206ENST00000543881 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
GABPB1-206ENST00000543881 LST1O00453 97 aa6.23□□□□□ -1.41
GABPB1-206ENST00000543881 COX6CP09669 75 aa6.23□□□□□ -1.41
GABPB1-206ENST00000543881 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
GABPB1-206ENST00000543881 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
GABPB1-206ENST00000543881 OBSCN-AS1Q96MR7 158 aa6.21□□□□□ -1.42
GABPB1-206ENST00000543881 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
GABPB1-206ENST00000543881 TRIAP1O43715 76 aa6.18□□□□□ -1.42
GABPB1-206ENST00000543881 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
GABPB1-206ENST00000543881 Q75L30 129 aa6.17□□□□□ -1.42
GABPB1-206ENST00000543881 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-206ENST00000543881 GHRHP01286 108 aa6.16□□□□□ -1.42
GABPB1-206ENST00000543881 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
GABPB1-206ENST00000543881 DSCR8Q96T75 97 aa6.15□□□□□ -1.42
GABPB1-206ENST00000543881 ATP11AUNQ6ZP68 121 aa6.15□□□□□ -1.43
GABPB1-206ENST00000543881 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
GABPB1-206ENST00000543881 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
GABPB1-206ENST00000543881 H0YGX0 51 aa6.13□□□□□ -1.43
GABPB1-206ENST00000543881 Q96NJ1 140 aa6.13□□□□□ -1.43
GABPB1-206ENST00000543881 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
GABPB1-206ENST00000543881 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
GABPB1-206ENST00000543881 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
GABPB1-206ENST00000543881 A0A087WSZ3 146 aa6.1□□□□□ -1.43
GABPB1-206ENST00000543881 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
GABPB1-206ENST00000543881 A8MUU9 505 aa6.09□□□□□ -1.44
GABPB1-206ENST00000543881 NDUFC1O43677 76 aa6.09□□□□□ -1.44
GABPB1-206ENST00000543881 A0A1W2PNM2 257 aa6.08□□□□□ -1.44
GABPB1-206ENST00000543881 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
GABPB1-206ENST00000543881 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
GABPB1-206ENST00000543881 DSCR10P59022 87 aa6.06□□□□□ -1.44
GABPB1-206ENST00000543881 H7BZZ5 65 aa6.05□□□□□ -1.44
GABPB1-206ENST00000543881 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
GABPB1-206ENST00000543881 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
GABPB1-206ENST00000543881 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
GABPB1-206ENST00000543881 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.44
GABPB1-206ENST00000543881 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
GABPB1-206ENST00000543881 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
GABPB1-206ENST00000543881 DNAL4O96015 105 aa6.01□□□□□ -1.45
GABPB1-206ENST00000543881 TRBV7-4A0A0J9YYF1 115 aa6□□□□□ -1.45
GABPB1-206ENST00000543881 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
GABPB1-206ENST00000543881 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
GABPB1-206ENST00000543881 CCKP06307 115 aa5.99□□□□□ -1.45
GABPB1-206ENST00000543881 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
GABPB1-206ENST00000543881 LINC00313P59037 77 aa5.99□□□□□ -1.45
GABPB1-206ENST00000543881 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
GABPB1-206ENST00000543881 MT2AP02795 61 aa5.98□□□□□ -1.45
GABPB1-206ENST00000543881 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
GABPB1-206ENST00000543881 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
GABPB1-206ENST00000543881 LINC00472Q9H8W2 130 aa5.97□□□□□ -1.45
GABPB1-206ENST00000543881 TMEM256-PLSCR3K7ERE1 68 aa5.96□□□□□ -1.46
GABPB1-206ENST00000543881 C20orf197Q8N268 126 aa5.96□□□□□ -1.46
GABPB1-206ENST00000543881 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
GABPB1-206ENST00000543881 H3BQ85 93 aa5.95□□□□□ -1.46
GABPB1-206ENST00000543881 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
GABPB1-206ENST00000543881 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
GABPB1-206ENST00000543881 MT1FP04733 61 aa5.94□□□□□ -1.46
GABPB1-206ENST00000543881 HRES1P13985 223 aa5.93□□□□□ -1.46
GABPB1-206ENST00000543881 MPLKIPQ8TAP9 179 aa5.93□□□□□ -1.46
GABPB1-206ENST00000543881 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
GABPB1-206ENST00000543881 A0A087WVE0 104 aa5.92□□□□□ -1.46
GABPB1-206ENST00000543881 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
GABPB1-206ENST00000543881 JMJD7-PLA2G4BH0Y9G9 81 aa5.91□□□□□ -1.46
GABPB1-206ENST00000543881 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
GABPB1-206ENST00000543881 RBM3P98179 157 aaKnown RBP5.9□□□□□ -1.47
GABPB1-206ENST00000543881 Q1T7F1 81 aa5.89□□□□□ -1.47
GABPB1-206ENST00000543881 A0A1B0GVX0 72 aa5.88□□□□□ -1.47
GABPB1-206ENST00000543881 UBL5Q9BZL1 73 aa5.87□□□□□ -1.47
GABPB1-206ENST00000543881 RBM12B-AS1Q9P1G2 102 aa5.87□□□□□ -1.47
GABPB1-206ENST00000543881 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
GABPB1-206ENST00000543881 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
GABPB1-206ENST00000543881 CXCL6P80162 114 aa5.85□□□□□ -1.47
GABPB1-206ENST00000543881 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
GABPB1-206ENST00000543881 Q6ZQT0 140 aa5.82□□□□□ -1.48
GABPB1-206ENST00000543881 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
GABPB1-206ENST00000543881 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
GABPB1-206ENST00000543881 LOC110117498A0A087WWA1 95 aa5.81□□□□□ -1.48
GABPB1-206ENST00000543881 NDUFS5O43920 106 aa5.81□□□□□ -1.48
GABPB1-206ENST00000543881 PDE6GP18545 87 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms