RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
VEGFB-204ENST00000543462 A0A1B0GW54 56 aa5.36□□□□□ -1.55
VEGFB-204ENST00000543462 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
VEGFB-204ENST00000543462 IMUPQ9GZP8 106 aa5.33□□□□□ -1.56
VEGFB-204ENST00000543462 SEC61BP60468 96 aaKnown RBP5.32□□□□□ -1.56
VEGFB-204ENST00000543462 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
VEGFB-204ENST00000543462 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
VEGFB-204ENST00000543462 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
VEGFB-204ENST00000543462 IGKV4-1P06312 121 aa5.3□□□□□ -1.56
VEGFB-204ENST00000543462 Q75L30 129 aa5.3□□□□□ -1.56
VEGFB-204ENST00000543462 ATP5EP2Q5VTU8 51 aa5.29□□□□□ -1.56
VEGFB-204ENST00000543462 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
VEGFB-204ENST00000543462 A8MUU9 505 aa5.28□□□□□ -1.56
VEGFB-204ENST00000543462 MT-ATP8P03928 68 aa5.28□□□□□ -1.56
VEGFB-204ENST00000543462 DEFB116Q30KQ4 102 aa5.28□□□□□ -1.56
VEGFB-204ENST00000543462 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
VEGFB-204ENST00000543462 J3KT08 172 aa5.27□□□□□ -1.57
VEGFB-204ENST00000543462 PCP4P48539 62 aa5.27□□□□□ -1.57
VEGFB-204ENST00000543462 DSCR10P59022 87 aa5.27□□□□□ -1.57
VEGFB-204ENST00000543462 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
VEGFB-204ENST00000543462 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
VEGFB-204ENST00000543462 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
VEGFB-204ENST00000543462 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
VEGFB-204ENST00000543462 UBL5Q9BZL1 73 aa5.24□□□□□ -1.57
VEGFB-204ENST00000543462 LINC00846Q9NV44 126 aa5.24□□□□□ -1.57
VEGFB-204ENST00000543462 IGKV3D-7A0A0C4DH55 119 aa5.23□□□□□ -1.57
VEGFB-204ENST00000543462 A8MWP4 228 aa5.23□□□□□ -1.57
VEGFB-204ENST00000543462 C8orf87E5RJ46 101 aa5.23□□□□□ -1.57
VEGFB-204ENST00000543462 LINC00313P59037 77 aa5.23□□□□□ -1.57
VEGFB-204ENST00000543462 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
VEGFB-204ENST00000543462 NREPQ16612 68 aa5.21□□□□□ -1.58
VEGFB-204ENST00000543462 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
VEGFB-204ENST00000543462 Q6ZVQ6 151 aa5.21□□□□□ -1.58
VEGFB-204ENST00000543462 CXCL6P80162 114 aa5.2□□□□□ -1.58
VEGFB-204ENST00000543462 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
VEGFB-204ENST00000543462 PRR15Q8IV56 129 aa5.19□□□□□ -1.58
VEGFB-204ENST00000543462 C8orf17Q9NRJ1 99 aa5.19□□□□□ -1.58
VEGFB-204ENST00000543462 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
VEGFB-204ENST00000543462 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
VEGFB-204ENST00000543462 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
VEGFB-204ENST00000543462 K7EQZ3 153 aa5.17□□□□□ -1.58
VEGFB-204ENST00000543462 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
VEGFB-204ENST00000543462 NDUFB1O75438 58 aa5.16□□□□□ -1.58
VEGFB-204ENST00000543462 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
VEGFB-204ENST00000543462 BPY2O14599 106 aa5.14□□□□□ -1.59
VEGFB-204ENST00000543462 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
VEGFB-204ENST00000543462 ATOX1O00244 68 aa5.13□□□□□ -1.59
VEGFB-204ENST00000543462 TMEM254Q8TBM7 123 aa5.13□□□□□ -1.59
VEGFB-204ENST00000543462 FAM236AA0A1B0GUQ0 79 aa5.12□□□□□ -1.59
VEGFB-204ENST00000543462 FAM236BA0A1B0GV22 79 aa5.12□□□□□ -1.59
VEGFB-204ENST00000543462 Q8N9L7 120 aa5.12□□□□□ -1.59
VEGFB-204ENST00000543462 SMIM20Q8N5G0 67 aa5.11□□□□□ -1.59
VEGFB-204ENST00000543462 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
VEGFB-204ENST00000543462 ZCCHC13Q8WW36 166 aaKnown RBP5.1□□□□□ -1.59
VEGFB-204ENST00000543462 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
VEGFB-204ENST00000543462 MPLKIPQ8TAP9 179 aa5.09□□□□□ -1.59
VEGFB-204ENST00000543462 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
VEGFB-204ENST00000543462 MT1HP80294 61 aa5.08□□□□□ -1.6
VEGFB-204ENST00000543462 HRES1P13985 223 aa5.07□□□□□ -1.6
VEGFB-204ENST00000543462 UQCRQO14949 82 aa5.06□□□□□ -1.6
VEGFB-204ENST00000543462 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
VEGFB-204ENST00000543462 A0A087WVE0 104 aa5.04□□□□□ -1.6
VEGFB-204ENST00000543462 HCG22E2RYF7 251 aa5.04□□□□□ -1.6
VEGFB-204ENST00000543462 COX7CP15954 63 aa5.04□□□□□ -1.6
VEGFB-204ENST00000543462 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
VEGFB-204ENST00000543462 WFDC13Q8IUB5 93 aa5.04□□□□□ -1.6
VEGFB-204ENST00000543462 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
VEGFB-204ENST00000543462 Q5W150 140 aa5.02□□□□□ -1.61
VEGFB-204ENST00000543462 SPINK7P58062 85 aa5□□□□□ -1.61
VEGFB-204ENST00000543462 CCDC179H3BU77 68 aa4.98□□□□□ -1.61
VEGFB-204ENST00000543462 COX6B2Q6YFQ2 88 aa4.97□□□□□ -1.61
VEGFB-204ENST00000543462 NDUFS5O43920 106 aa4.96□□□□□ -1.62
VEGFB-204ENST00000543462 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
VEGFB-204ENST00000543462 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
VEGFB-204ENST00000543462 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
VEGFB-204ENST00000543462 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
VEGFB-204ENST00000543462 NDUFC1O43677 76 aa4.93□□□□□ -1.62
VEGFB-204ENST00000543462 C7orf65Q6ZTY9 151 aa4.92□□□□□ -1.62
VEGFB-204ENST00000543462 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
VEGFB-204ENST00000543462 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
VEGFB-204ENST00000543462 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
VEGFB-204ENST00000543462 TMEM258P61165 79 aa4.9□□□□□ -1.63
VEGFB-204ENST00000543462 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
VEGFB-204ENST00000543462 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
VEGFB-204ENST00000543462 H3BPC8 53 aa4.88□□□□□ -1.63
VEGFB-204ENST00000543462 C20orf197Q8N268 126 aa4.88□□□□□ -1.63
VEGFB-204ENST00000543462 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
VEGFB-204ENST00000543462 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
VEGFB-204ENST00000543462 TRAV22A0A0B4J277 110 aa4.85□□□□□ -1.63
VEGFB-204ENST00000543462 M0R2T5 61 aa4.85□□□□□ -1.63
VEGFB-204ENST00000543462 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
VEGFB-204ENST00000543462 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
VEGFB-204ENST00000543462 H7BZZ5 65 aa4.84□□□□□ -1.63
VEGFB-204ENST00000543462 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
VEGFB-204ENST00000543462 MP68P56378 58 aa4.83□□□□□ -1.64
VEGFB-204ENST00000543462 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
VEGFB-204ENST00000543462 LCE2BO14633 110 aa4.82□□□□□ -1.64
VEGFB-204ENST00000543462 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
VEGFB-204ENST00000543462 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
VEGFB-204ENST00000543462 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 913.3 ms