RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 IGF2RP11717 2491 aa2□□□□□ -2.09
MDM2-229ENST00000543046 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
MDM2-229ENST00000543046 PRRC2CQ9Y520 2896 aaKnown RBP1.98□□□□□ -2.09
MDM2-229ENST00000543046 GVINP1Q7Z2Y8 2422 aa1.98□□□□□ -2.09
MDM2-229ENST00000543046 SPEGQ15772 3267 aa1.97□□□□□ -2.09
MDM2-229ENST00000543046 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
MDM2-229ENST00000543046 SPINK1P00995 79 aa1.96□□□□□ -2.1
MDM2-229ENST00000543046 SPINK6Q6UWN8 80 aa1.96□□□□□ -2.1
MDM2-229ENST00000543046 HRNRQ86YZ3 2850 aaPredicted RBP1.96□□□□□ -2.1
MDM2-229ENST00000543046 AKAP9Q99996 3911 aa1.96□□□□□ -2.1
MDM2-229ENST00000543046 DCHS2Q6V1P9 2916 aa1.95□□□□□ -2.1
MDM2-229ENST00000543046 FLG2Q5D862 2391 aaPredicted RBP1.95□□□□□ -2.1
MDM2-229ENST00000543046 CELSR2Q9HCU4 2923 aa1.95□□□□□ -2.1
MDM2-229ENST00000543046 CELSR3Q9NYQ7 3312 aa1.94□□□□□ -2.1
MDM2-229ENST00000543046 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
MDM2-229ENST00000543046 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
MDM2-229ENST00000543046 FN1P02751 2386 aaKnown RBP1.94□□□□□ -2.1
MDM2-229ENST00000543046 APCP25054 2843 aa1.93□□□□□ -2.1
MDM2-229ENST00000543046 HIVEP2P31629 2446 aa1.93□□□□□ -2.1
MDM2-229ENST00000543046 TLN1Q9Y490 2541 aaKnown RBP1.93□□□□□ -2.1
MDM2-229ENST00000543046 TLN2Q9Y4G6 2542 aa1.93□□□□□ -2.1
MDM2-229ENST00000543046 DNAH1Q9P2D7 4330 aa1.93□□□□□ -2.1
MDM2-229ENST00000543046 ASH1LQ9NR48 2969 aaKnown RBP1.92□□□□□ -2.1
MDM2-229ENST00000543046 BOD1L1Q8NFC6 3051 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 RIF1Q5UIP0 2472 aaKnown RBP1.92□□□□□ -2.1
MDM2-229ENST00000543046 LRBAP50851 2863 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 NBPF19A0A087WUL8 3843 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
MDM2-229ENST00000543046 OTOGLQ3ZCN5 2332 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 MYO15AQ9UKN7 3530 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 F8P00451 2351 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 HIVEP3Q5T1R4 2406 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
MDM2-229ENST00000543046 SETXQ7Z333 2677 aaKnown RBP1.9□□□□□ -2.1
MDM2-229ENST00000543046 DMXL1Q9Y485 3027 aa1.9□□□□□ -2.11
MDM2-229ENST00000543046 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
MDM2-229ENST00000543046 R4GN34 69 aa1.9□□□□□ -2.11
MDM2-229ENST00000543046 S4R3F8 94 aa1.9□□□□□ -2.11
MDM2-229ENST00000543046 CEP295Q9C0D2 2601 aa1.89□□□□□ -2.11
MDM2-229ENST00000543046 ADGRG4Q8IZF6 3080 aa1.89□□□□□ -2.11
MDM2-229ENST00000543046 JMJD1CQ15652 2540 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 ZFYVE26Q68DK2 2539 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 LAMA5O15230 3695 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 CELSR1Q9NYQ6 3014 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 ANK3Q12955 4377 aaKnown RBP1.88□□□□□ -2.11
MDM2-229ENST00000543046 BSNQ9UPA5 3926 aa1.88□□□□□ -2.11
MDM2-229ENST00000543046 ANKRD11Q6UB99 2663 aaPredicted RBP1.87□□□□□ -2.11
MDM2-229ENST00000543046 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
MDM2-229ENST00000543046 DEFB123Q8N688 67 aa1.87□□□□□ -2.11
MDM2-229ENST00000543046 TEX15Q9BXT5 2789 aa1.87□□□□□ -2.11
MDM2-229ENST00000543046 SONP18583 2426 aaKnown RBP1.87□□□□□ -2.11
MDM2-229ENST00000543046 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
MDM2-229ENST00000543046 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
MDM2-229ENST00000543046 APLNQ9ULZ1 77 aa1.86□□□□□ -2.11
MDM2-229ENST00000543046 NF1P21359 2839 aa1.85□□□□□ -2.11
MDM2-229ENST00000543046 ATMQ13315 3056 aa1.85□□□□□ -2.11
MDM2-229ENST00000543046 ASPMQ8IZT6 3477 aa1.85□□□□□ -2.11
MDM2-229ENST00000543046 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
MDM2-229ENST00000543046 LOC400499M0QZD8 3231 aa1.85□□□□□ -2.11
MDM2-229ENST00000543046 NAV2Q8IVL1 2488 aa1.84□□□□□ -2.11
MDM2-229ENST00000543046 UBR5O95071 2799 aaPredicted RBP1.84□□□□□ -2.11
MDM2-229ENST00000543046 A0A0D9SG42 100 aa1.84□□□□□ -2.11
MDM2-229ENST00000543046 M0QZ58 72 aa1.84□□□□□ -2.11
MDM2-229ENST00000543046 INE1O15225 51 aa1.84□□□□□ -2.11
MDM2-229ENST00000543046 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
MDM2-229ENST00000543046 DOPEY1Q5JWR5 2465 aa1.84□□□□□ -2.12
MDM2-229ENST00000543046 MYO9AB2RTY4 2548 aa1.84□□□□□ -2.12
MDM2-229ENST00000543046 RELNP78509 3460 aa1.83□□□□□ -2.12
MDM2-229ENST00000543046 UTP20O75691 2785 aaKnown RBP1.83□□□□□ -2.12
MDM2-229ENST00000543046 USP9XQ93008 2570 aaPredicted RBP1.83□□□□□ -2.12
MDM2-229ENST00000543046 DNAH8Q96JB1 4490 aa1.82□□□□□ -2.12
MDM2-229ENST00000543046 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
MDM2-229ENST00000543046 MXRA5Q9NR99 2828 aa1.81□□□□□ -2.12
MDM2-229ENST00000543046 MTORP42345 2549 aa1.81□□□□□ -2.12
MDM2-229ENST00000543046 GCN1Q92616 2671 aaKnown RBP1.81□□□□□ -2.12
MDM2-229ENST00000543046 MUC6Q6W4X9 2439 aa1.8□□□□□ -2.12
MDM2-229ENST00000543046 UBE2DNLQ8IWF7 75 aa1.8□□□□□ -2.12
MDM2-229ENST00000543046 UNC79Q9P2D8 2635 aa1.8□□□□□ -2.12
MDM2-229ENST00000543046 PIEZO1Q92508 2521 aa1.79□□□□□ -2.12
MDM2-229ENST00000543046 VPS13CQ709C8 3753 aa1.79□□□□□ -2.12
MDM2-229ENST00000543046 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
MDM2-229ENST00000543046 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
MDM2-229ENST00000543046 USP9YO00507 2555 aaPredicted RBP1.79□□□□□ -2.12
MDM2-229ENST00000543046 SRRM2Q9UQ35 2752 aaKnown RBP1.79□□□□□ -2.12
MDM2-229ENST00000543046 CENPEQ02224 2701 aa1.78□□□□□ -2.12
MDM2-229ENST00000543046 PKD1L2Q7Z442 2459 aa1.78□□□□□ -2.12
MDM2-229ENST00000543046 DYNC2H1Q8NCM8 4307 aaKnown RBP1.77□□□□□ -2.13
MDM2-229ENST00000543046 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
MDM2-229ENST00000543046 CRYBG3Q68DQ2 2970 aa1.77□□□□□ -2.13
MDM2-229ENST00000543046 TENM4Q6N022 2769 aa1.77□□□□□ -2.13
MDM2-229ENST00000543046 COL6A5A8TX70 2615 aa1.77□□□□□ -2.13
MDM2-229ENST00000543046 CHD8Q9HCK8 2581 aa1.77□□□□□ -2.13
MDM2-229ENST00000543046 DNAH10Q8IVF4 4471 aa1.76□□□□□ -2.13
MDM2-229ENST00000543046 TRRAPQ9Y4A5 3859 aa1.76□□□□□ -2.13
MDM2-229ENST00000543046 EYSQ5T1H1 3165 aa1.76□□□□□ -2.13
MDM2-229ENST00000543046 DNAH17Q9UFH2 4485 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms