RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
LDHA-220ENST00000542179 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
LDHA-220ENST00000542179 PRR26Q8N8Z3 221 aa5.38□□□□□ -1.55
LDHA-220ENST00000542179 SIGMAR1Q99720 223 aa5.38□□□□□ -1.55
LDHA-220ENST00000542179 CXCL6P80162 114 aa5.37□□□□□ -1.55
LDHA-220ENST00000542179 SS18L2Q9UHA2 77 aa5.37□□□□□ -1.55
LDHA-220ENST00000542179 MT-ATP8P03928 68 aa5.36□□□□□ -1.55
LDHA-220ENST00000542179 Q5XG85 94 aa5.36□□□□□ -1.55
LDHA-220ENST00000542179 SPINK1P00995 79 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
LDHA-220ENST00000542179 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
LDHA-220ENST00000542179 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
LDHA-220ENST00000542179 IGKV3D-7A0A0C4DH55 119 aa5.33□□□□□ -1.56
LDHA-220ENST00000542179 BPY2O14599 106 aa5.33□□□□□ -1.56
LDHA-220ENST00000542179 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
LDHA-220ENST00000542179 LINC00304Q8N9R0 145 aa5.33□□□□□ -1.56
LDHA-220ENST00000542179 J3KT08 172 aa5.32□□□□□ -1.56
LDHA-220ENST00000542179 Q96NJ1 140 aa5.32□□□□□ -1.56
LDHA-220ENST00000542179 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
LDHA-220ENST00000542179 DSCR10P59022 87 aa5.31□□□□□ -1.56
LDHA-220ENST00000542179 OXTP01178 125 aa5.28□□□□□ -1.56
LDHA-220ENST00000542179 DEFB116Q30KQ4 102 aa5.28□□□□□ -1.56
LDHA-220ENST00000542179 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
LDHA-220ENST00000542179 A8MWP4 228 aa5.27□□□□□ -1.57
LDHA-220ENST00000542179 IGKV4-1P06312 121 aa5.27□□□□□ -1.57
LDHA-220ENST00000542179 HIST1H4AP62805 103 aaKnown RBP5.27□□□□□ -1.57
LDHA-220ENST00000542179 MUC2Q02817 5179 aa5.27□□□□□ -1.57
LDHA-220ENST00000542179 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
LDHA-220ENST00000542179 C1orf195Q5TG92 126 aa5.26□□□□□ -1.57
LDHA-220ENST00000542179 K7EQZ3 153 aa5.25□□□□□ -1.57
LDHA-220ENST00000542179 NDUFB1O75438 58 aa5.25□□□□□ -1.57
LDHA-220ENST00000542179 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
LDHA-220ENST00000542179 PRR15Q8IV56 129 aa5.25□□□□□ -1.57
LDHA-220ENST00000542179 A0A087WVE0 104 aa5.24□□□□□ -1.57
LDHA-220ENST00000542179 Q8N9L7 120 aa5.24□□□□□ -1.57
LDHA-220ENST00000542179 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
LDHA-220ENST00000542179 A0A1B0GVX0 72 aa5.22□□□□□ -1.57
LDHA-220ENST00000542179 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
LDHA-220ENST00000542179 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
LDHA-220ENST00000542179 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
LDHA-220ENST00000542179 TNXBP22105 4242 aa5.19□□□□□ -1.58
LDHA-220ENST00000542179 LRP1Q07954 4544 aaKnown RBP5.19□□□□□ -1.58
LDHA-220ENST00000542179 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
LDHA-220ENST00000542179 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
LDHA-220ENST00000542179 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
LDHA-220ENST00000542179 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
LDHA-220ENST00000542179 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
LDHA-220ENST00000542179 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
LDHA-220ENST00000542179 ATOX1O00244 68 aa5.16□□□□□ -1.58
LDHA-220ENST00000542179 CASC2Q6XLA1 102 aa5.16□□□□□ -1.58
LDHA-220ENST00000542179 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
LDHA-220ENST00000542179 LINC00313P59037 77 aa5.15□□□□□ -1.59
LDHA-220ENST00000542179 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
LDHA-220ENST00000542179 hDV103S1A0JD37 113 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 NOTCH2NLQ7Z3S9 236 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 WFDC13Q8IUB5 93 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 SMIM20Q8N5G0 67 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
LDHA-220ENST00000542179 RETNLBQ9BQ08 111 aa5.13□□□□□ -1.59
LDHA-220ENST00000542179 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
LDHA-220ENST00000542179 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
LDHA-220ENST00000542179 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
LDHA-220ENST00000542179 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
LDHA-220ENST00000542179 ANAPC13Q9BS18 74 aa5.11□□□□□ -1.59
LDHA-220ENST00000542179 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
LDHA-220ENST00000542179 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
LDHA-220ENST00000542179 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
LDHA-220ENST00000542179 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
LDHA-220ENST00000542179 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
LDHA-220ENST00000542179 IGLV7-46A0A075B6I9 117 aa5.08□□□□□ -1.6
LDHA-220ENST00000542179 UQCRQO14949 82 aa5.07□□□□□ -1.6
LDHA-220ENST00000542179 COX7CP15954 63 aa5.07□□□□□ -1.6
LDHA-220ENST00000542179 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
LDHA-220ENST00000542179 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
LDHA-220ENST00000542179 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
LDHA-220ENST00000542179 NDUFS5O43920 106 aa5.04□□□□□ -1.6
LDHA-220ENST00000542179 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
LDHA-220ENST00000542179 A8MUU9 505 aa5.03□□□□□ -1.6
LDHA-220ENST00000542179 PRR4Q16378 134 aa5.03□□□□□ -1.6
LDHA-220ENST00000542179 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
LDHA-220ENST00000542179 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
LDHA-220ENST00000542179 H3BPC8 53 aa5□□□□□ -1.61
LDHA-220ENST00000542179 MP68P56378 58 aa5□□□□□ -1.61
LDHA-220ENST00000542179 Q75L30 129 aa5□□□□□ -1.61
LDHA-220ENST00000542179 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
LDHA-220ENST00000542179 Q5W150 140 aa4.99□□□□□ -1.61
LDHA-220ENST00000542179 A0A0U1RQV1 116 aa4.98□□□□□ -1.61
LDHA-220ENST00000542179 H0Y9P7 68 aa4.98□□□□□ -1.61
LDHA-220ENST00000542179 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
LDHA-220ENST00000542179 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
LDHA-220ENST00000542179 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
LDHA-220ENST00000542179 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
LDHA-220ENST00000542179 LINC00208Q96KT6 92 aa4.95□□□□□ -1.62
LDHA-220ENST00000542179 LOC101927531A0A1B0GV80 90 aa4.94□□□□□ -1.62
LDHA-220ENST00000542179 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms