RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
SNHG1-216ENST00000541416 PRO1854Q9UHT4 67 aa5.86□□□□□ -1.47
SNHG1-216ENST00000541416 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
SNHG1-216ENST00000541416 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
SNHG1-216ENST00000541416 HIGD1BQ9P298 99 aa5.85□□□□□ -1.47
SNHG1-216ENST00000541416 J3KT08 172 aa5.84□□□□□ -1.47
SNHG1-216ENST00000541416 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
SNHG1-216ENST00000541416 TRIAP1O43715 76 aa5.82□□□□□ -1.48
SNHG1-216ENST00000541416 NDUFB1O75438 58 aa5.82□□□□□ -1.48
SNHG1-216ENST00000541416 S100A6P06703 90 aa5.82□□□□□ -1.48
SNHG1-216ENST00000541416 VPS25Q9BRG1 176 aa5.82□□□□□ -1.48
SNHG1-216ENST00000541416 DSCR8Q96T75 97 aa5.81□□□□□ -1.48
SNHG1-216ENST00000541416 COX6CP09669 75 aa5.8□□□□□ -1.48
SNHG1-216ENST00000541416 CEND1Q8N111 149 aa5.8□□□□□ -1.48
SNHG1-216ENST00000541416 C14orf144Q96I85 54 aa5.8□□□□□ -1.48
SNHG1-216ENST00000541416 PSMB2P49721 201 aa5.79□□□□□ -1.48
SNHG1-216ENST00000541416 UBE2V1Q13404 147 aa5.79□□□□□ -1.48
SNHG1-216ENST00000541416 NEBP20929 6669 aa5.79□□□□□ -1.48
SNHG1-216ENST00000541416 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
SNHG1-216ENST00000541416 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
SNHG1-216ENST00000541416 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SNHG1-216ENST00000541416 SPATA45Q537H7 98 aa5.75□□□□□ -1.49
SNHG1-216ENST00000541416 PAM16Q9Y3D7 125 aa5.75□□□□□ -1.49
SNHG1-216ENST00000541416 S100A1P23297 94 aa5.74□□□□□ -1.49
SNHG1-216ENST00000541416 C2orf91Q6ZV80 131 aa5.74□□□□□ -1.49
SNHG1-216ENST00000541416 IGKV3D-7A0A0C4DH55 119 aa5.73□□□□□ -1.49
SNHG1-216ENST00000541416 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
SNHG1-216ENST00000541416 C9JAW5 83 aa5.72□□□□□ -1.49
SNHG1-216ENST00000541416 FXYD2P54710 66 aa5.72□□□□□ -1.49
SNHG1-216ENST00000541416 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
SNHG1-216ENST00000541416 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
SNHG1-216ENST00000541416 Q6ZQT0 140 aa5.71□□□□□ -1.5
SNHG1-216ENST00000541416 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
SNHG1-216ENST00000541416 Q6ZVQ6 151 aa5.7□□□□□ -1.5
SNHG1-216ENST00000541416 A6NN06 94 aa5.69□□□□□ -1.5
SNHG1-216ENST00000541416 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
SNHG1-216ENST00000541416 A0A1B0GW54 56 aa5.67□□□□□ -1.5
SNHG1-216ENST00000541416 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
SNHG1-216ENST00000541416 K7ERJ3 54 aa5.65□□□□□ -1.5
SNHG1-216ENST00000541416 HSD52Q0P140 79 aa5.65□□□□□ -1.5
SNHG1-216ENST00000541416 FAM236AA0A1B0GUQ0 79 aa5.63□□□□□ -1.51
SNHG1-216ENST00000541416 FAM236BA0A1B0GV22 79 aa5.63□□□□□ -1.51
SNHG1-216ENST00000541416 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
SNHG1-216ENST00000541416 NDUFS5O43920 106 aa5.62□□□□□ -1.51
SNHG1-216ENST00000541416 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
SNHG1-216ENST00000541416 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
SNHG1-216ENST00000541416 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
SNHG1-216ENST00000541416 JMJD7-PLA2G4BH0Y9G9 81 aa5.61□□□□□ -1.51
SNHG1-216ENST00000541416 Q5VV11 94 aa5.61□□□□□ -1.51
SNHG1-216ENST00000541416 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
SNHG1-216ENST00000541416 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
SNHG1-216ENST00000541416 PDE6GP18545 87 aa5.6□□□□□ -1.51
SNHG1-216ENST00000541416 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
SNHG1-216ENST00000541416 MDN1Q9NU22 5596 aa5.58□□□□□ -1.52
SNHG1-216ENST00000541416 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
SNHG1-216ENST00000541416 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
SNHG1-216ENST00000541416 NREPQ16612 68 aa5.57□□□□□ -1.52
SNHG1-216ENST00000541416 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
SNHG1-216ENST00000541416 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
SNHG1-216ENST00000541416 KMT2DO14686 5537 aa5.53□□□□□ -1.52
SNHG1-216ENST00000541416 MT1BP07438 61 aa5.53□□□□□ -1.52
SNHG1-216ENST00000541416 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
SNHG1-216ENST00000541416 ATXN8Q156A1 80 aa5.53□□□□□ -1.52
SNHG1-216ENST00000541416 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
SNHG1-216ENST00000541416 C4orf26Q17RF5 130 aa5.51□□□□□ -1.53
SNHG1-216ENST00000541416 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
SNHG1-216ENST00000541416 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
SNHG1-216ENST00000541416 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
SNHG1-216ENST00000541416 K7EQZ3 153 aa5.49□□□□□ -1.53
SNHG1-216ENST00000541416 C14orf132Q9NPU4 83 aa5.49□□□□□ -1.53
SNHG1-216ENST00000541416 UQCR10Q9UDW1 63 aa5.49□□□□□ -1.53
SNHG1-216ENST00000541416 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
SNHG1-216ENST00000541416 S4R3F8 94 aa5.48□□□□□ -1.53
SNHG1-216ENST00000541416 Q5W150 140 aa5.47□□□□□ -1.53
SNHG1-216ENST00000541416 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
SNHG1-216ENST00000541416 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
SNHG1-216ENST00000541416 BPY2O14599 106 aa5.44□□□□□ -1.54
SNHG1-216ENST00000541416 TMA7Q9Y2S6 64 aaKnown RBP5.44□□□□□ -1.54
SNHG1-216ENST00000541416 HCG22E2RYF7 251 aa5.43□□□□□ -1.54
SNHG1-216ENST00000541416 CXCL6P80162 114 aa5.43□□□□□ -1.54
SNHG1-216ENST00000541416 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
SNHG1-216ENST00000541416 LOC105371267A0A1B0GV96 52 aa5.42□□□□□ -1.54
SNHG1-216ENST00000541416 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
SNHG1-216ENST00000541416 PYY3Q5JQD4 70 aa5.42□□□□□ -1.54
SNHG1-216ENST00000541416 LCA10Q71F78 164 aa5.4□□□□□ -1.54
SNHG1-216ENST00000541416 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
SNHG1-216ENST00000541416 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
SNHG1-216ENST00000541416 M0R143 59 aa5.37□□□□□ -1.55
SNHG1-216ENST00000541416 NAA38Q9BRA0 125 aaKnown RBP5.36□□□□□ -1.55
SNHG1-216ENST00000541416 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
SNHG1-216ENST00000541416 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
SNHG1-216ENST00000541416 SPRR2EP22531 72 aa5.32□□□□□ -1.56
SNHG1-216ENST00000541416 SPRR2BP35325 72 aa5.32□□□□□ -1.56
SNHG1-216ENST00000541416 SPRR2AP35326 72 aa5.32□□□□□ -1.56
SNHG1-216ENST00000541416 Q8N9L7 120 aa5.32□□□□□ -1.56
SNHG1-216ENST00000541416 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
SNHG1-216ENST00000541416 H3BT86 120 aa5.3□□□□□ -1.56
SNHG1-216ENST00000541416 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
SNHG1-216ENST00000541416 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
SNHG1-216ENST00000541416 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms