RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 ZANQ9Y493 2812 aa3.91□□□□□ -1.78
RTL9-203ENST00000540313 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
RTL9-203ENST00000540313 FBN2P35556 2912 aa3.91□□□□□ -1.78
RTL9-203ENST00000540313 KRTAP10-2P60368 255 aa3.9□□□□□ -1.78
RTL9-203ENST00000540313 LINC00483Q53H64 154 aa3.9□□□□□ -1.78
RTL9-203ENST00000540313 SMG1Q96Q15 3661 aaKnown RBP3.9□□□□□ -1.79
RTL9-203ENST00000540313 PDZD2O15018 2839 aa3.89□□□□□ -1.79
RTL9-203ENST00000540313 RPS29P62273 56 aaKnown RBP3.89□□□□□ -1.79
RTL9-203ENST00000540313 ASB16-AS1Q495Z4 193 aa3.89□□□□□ -1.79
RTL9-203ENST00000540313 S4R3F8 94 aa3.88□□□□□ -1.79
RTL9-203ENST00000540313 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
RTL9-203ENST00000540313 OTOGQ6ZRI0 2925 aa3.85□□□□□ -1.79
RTL9-203ENST00000540313 A6NN06 94 aa3.85□□□□□ -1.79
RTL9-203ENST00000540313 ROMO1P60602 79 aa3.85□□□□□ -1.79
RTL9-203ENST00000540313 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
RTL9-203ENST00000540313 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
RTL9-203ENST00000540313 NOTCH1P46531 2555 aa3.84□□□□□ -1.79
RTL9-203ENST00000540313 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
RTL9-203ENST00000540313 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.8
RTL9-203ENST00000540313 NBEAL1Q6ZS30 2694 aa3.84□□□□□ -1.8
RTL9-203ENST00000540313 PANO1I0J062 215 aa3.83□□□□□ -1.8
RTL9-203ENST00000540313 A0A087X002 238 aa3.81□□□□□ -1.8
RTL9-203ENST00000540313 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
RTL9-203ENST00000540313 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
RTL9-203ENST00000540313 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
RTL9-203ENST00000540313 NF1P21359 2839 aa3.79□□□□□ -1.8
RTL9-203ENST00000540313 MXRA5Q9NR99 2828 aa3.79□□□□□ -1.8
RTL9-203ENST00000540313 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
RTL9-203ENST00000540313 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
RTL9-203ENST00000540313 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
RTL9-203ENST00000540313 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
RTL9-203ENST00000540313 A8MU10 97 aa3.77□□□□□ -1.81
RTL9-203ENST00000540313 R4GN34 69 aa3.77□□□□□ -1.81
RTL9-203ENST00000540313 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
RTL9-203ENST00000540313 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
RTL9-203ENST00000540313 CELSR1Q9NYQ6 3014 aa3.73□□□□□ -1.81
RTL9-203ENST00000540313 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
RTL9-203ENST00000540313 NBPF19A0A087WUL8 3843 aa3.72□□□□□ -1.81
RTL9-203ENST00000540313 M0QZ58 72 aa3.72□□□□□ -1.81
RTL9-203ENST00000540313 SPENQ96T58 3664 aaKnown RBP3.71□□□□□ -1.82
RTL9-203ENST00000540313 NBEAL2Q6ZNJ1 2754 aa3.68□□□□□ -1.82
RTL9-203ENST00000540313 CSMD1Q96PZ7 3565 aa3.67□□□□□ -1.82
RTL9-203ENST00000540313 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
RTL9-203ENST00000540313 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
RTL9-203ENST00000540313 TENM1Q9UKZ4 2725 aa3.66□□□□□ -1.82
RTL9-203ENST00000540313 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
RTL9-203ENST00000540313 CSMD2Q7Z408 3487 aa3.65□□□□□ -1.83
RTL9-203ENST00000540313 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
RTL9-203ENST00000540313 STAB2Q8WWQ8 2551 aa3.62□□□□□ -1.83
RTL9-203ENST00000540313 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
RTL9-203ENST00000540313 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
RTL9-203ENST00000540313 A8MUU9 505 aa3.59□□□□□ -1.83
RTL9-203ENST00000540313 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
RTL9-203ENST00000540313 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.84
RTL9-203ENST00000540313 ANK3Q12955 4377 aaKnown RBP3.57□□□□□ -1.84
RTL9-203ENST00000540313 VWFP04275 2813 aa3.56□□□□□ -1.84
RTL9-203ENST00000540313 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
RTL9-203ENST00000540313 H0YAA0 97 aa3.52□□□□□ -1.85
RTL9-203ENST00000540313 FBN3Q75N90 2809 aa3.52□□□□□ -1.85
RTL9-203ENST00000540313 AKAP9Q99996 3911 aa3.52□□□□□ -1.85
RTL9-203ENST00000540313 PKD1L1Q8TDX9 2849 aa3.51□□□□□ -1.85
RTL9-203ENST00000540313 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
RTL9-203ENST00000540313 TENM3Q9P273 2699 aa3.5□□□□□ -1.85
RTL9-203ENST00000540313 SVEP1Q4LDE5 3571 aa3.49□□□□□ -1.85
RTL9-203ENST00000540313 XP32Q5T750 250 aa3.49□□□□□ -1.85
RTL9-203ENST00000540313 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
RTL9-203ENST00000540313 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
RTL9-203ENST00000540313 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
RTL9-203ENST00000540313 TGP01266 2768 aa3.48□□□□□ -1.85
RTL9-203ENST00000540313 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
RTL9-203ENST00000540313 TNP1P09430 55 aa3.45□□□□□ -1.86
RTL9-203ENST00000540313 VPS13CQ709C8 3753 aa3.44□□□□□ -1.86
RTL9-203ENST00000540313 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
RTL9-203ENST00000540313 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
RTL9-203ENST00000540313 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
RTL9-203ENST00000540313 P0C880 135 aa3.42□□□□□ -1.86
RTL9-203ENST00000540313 TENM2Q9NT68 2774 aa3.42□□□□□ -1.86
RTL9-203ENST00000540313 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
RTL9-203ENST00000540313 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
RTL9-203ENST00000540313 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
RTL9-203ENST00000540313 DNHD1Q96M86 4753 aa3.32□□□□□ -1.88
RTL9-203ENST00000540313 CUBNO60494 3623 aa3.32□□□□□ -1.88
RTL9-203ENST00000540313 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
RTL9-203ENST00000540313 ANK2Q01484 3957 aa3.26□□□□□ -1.89
RTL9-203ENST00000540313 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
RTL9-203ENST00000540313 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
RTL9-203ENST00000540313 COL7A1Q02388 2944 aa3.21□□□□□ -1.9
RTL9-203ENST00000540313 DNAH9Q9NYC9 4486 aa3.2□□□□□ -1.9
RTL9-203ENST00000540313 HUWE1Q7Z6Z7 4374 aaKnown RBP3.2□□□□□ -1.9
RTL9-203ENST00000540313 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
RTL9-203ENST00000540313 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
RTL9-203ENST00000540313 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.91
RTL9-203ENST00000540313 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
RTL9-203ENST00000540313 DNAH3Q8TD57 4116 aa3.09□□□□□ -1.91
RTL9-203ENST00000540313 MT1HL1P0DM35 61 aa3.09□□□□□ -1.91
RTL9-203ENST00000540313 ALMS1Q8TCU4 4167 aa3.07□□□□□ -1.92
RTL9-203ENST00000540313 PLECQ15149 4684 aaKnown RBP3.06□□□□□ -1.92
RTL9-203ENST00000540313 CMYA5Q8N3K9 4069 aa3.06□□□□□ -1.92
RTL9-203ENST00000540313 STARD9Q9P2P6 4700 aa3.05□□□□□ -1.92
RTL9-203ENST00000540313 KRTAP3-2Q9BYR7 98 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms