RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
PBX1-212ENST00000540236 A0A087WTM6 91 aa6.28□□□□□ -1.4
PBX1-212ENST00000540236 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
PBX1-212ENST00000540236 UTP20O75691 2785 aaKnown RBP6.27□□□□□ -1.41
PBX1-212ENST00000540236 PIEZO1Q92508 2521 aa6.23□□□□□ -1.41
PBX1-212ENST00000540236 CELSR2Q9HCU4 2923 aa6.23□□□□□ -1.41
PBX1-212ENST00000540236 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
PBX1-212ENST00000540236 KRTAP24-1Q3LI83 254 aa6.22□□□□□ -1.41
PBX1-212ENST00000540236 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
PBX1-212ENST00000540236 NF1P21359 2839 aa6.2□□□□□ -1.42
PBX1-212ENST00000540236 CENPEQ02224 2701 aa6.2□□□□□ -1.42
PBX1-212ENST00000540236 UBR5O95071 2799 aaPredicted RBP6.19□□□□□ -1.42
PBX1-212ENST00000540236 ZANQ9Y493 2812 aa6.18□□□□□ -1.42
PBX1-212ENST00000540236 HIVEP1P15822 2718 aa6.17□□□□□ -1.42
PBX1-212ENST00000540236 FLNAP21333 2647 aaKnown RBP6.13□□□□□ -1.43
PBX1-212ENST00000540236 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
PBX1-212ENST00000540236 S4R3F8 94 aa6.12□□□□□ -1.43
PBX1-212ENST00000540236 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
PBX1-212ENST00000540236 NOTCH2Q04721 2471 aa6.11□□□□□ -1.43
PBX1-212ENST00000540236 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
PBX1-212ENST00000540236 CFAP46Q8IYW2 2715 aa6.1□□□□□ -1.43
PBX1-212ENST00000540236 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
PBX1-212ENST00000540236 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
PBX1-212ENST00000540236 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
PBX1-212ENST00000540236 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
PBX1-212ENST00000540236 ITPR3Q14573 2671 aa6.04□□□□□ -1.44
PBX1-212ENST00000540236 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
PBX1-212ENST00000540236 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
PBX1-212ENST00000540236 ZNF469Q96JG9 3925 aaPredicted RBP6.01□□□□□ -1.45
PBX1-212ENST00000540236 ZNF292O60281 2723 aa6□□□□□ -1.45
PBX1-212ENST00000540236 HELZ2Q9BYK8 2649 aaKnown RBP5.99□□□□□ -1.45
PBX1-212ENST00000540236 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
PBX1-212ENST00000540236 ATRQ13535 2644 aa5.95□□□□□ -1.46
PBX1-212ENST00000540236 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
PBX1-212ENST00000540236 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
PBX1-212ENST00000540236 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
PBX1-212ENST00000540236 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
PBX1-212ENST00000540236 FASNP49327 2511 aaKnown RBP5.93□□□□□ -1.46
PBX1-212ENST00000540236 M0QZ58 72 aa5.93□□□□□ -1.46
PBX1-212ENST00000540236 USP24Q9UPU5 2620 aa5.92□□□□□ -1.46
PBX1-212ENST00000540236 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
PBX1-212ENST00000540236 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
PBX1-212ENST00000540236 FLNBO75369 2602 aaKnown RBP5.9□□□□□ -1.46
PBX1-212ENST00000540236 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
PBX1-212ENST00000540236 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
PBX1-212ENST00000540236 ANK3Q12955 4377 aaKnown RBP5.89□□□□□ -1.47
PBX1-212ENST00000540236 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
PBX1-212ENST00000540236 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
PBX1-212ENST00000540236 NSD1Q96L73 2696 aaPredicted RBP5.87□□□□□ -1.47
PBX1-212ENST00000540236 HECTD1Q9ULT8 2610 aa5.86□□□□□ -1.47
PBX1-212ENST00000540236 FRAS1Q86XX4 4008 aa5.86□□□□□ -1.47
PBX1-212ENST00000540236 NBEAL1Q6ZS30 2694 aa5.86□□□□□ -1.47
PBX1-212ENST00000540236 STAB2Q8WWQ8 2551 aa5.85□□□□□ -1.47
PBX1-212ENST00000540236 R4GN34 69 aa5.85□□□□□ -1.47
PBX1-212ENST00000540236 Q6ZRN7 208 aaPredicted RBP5.85□□□□□ -1.47
PBX1-212ENST00000540236 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.48
PBX1-212ENST00000540236 MAST4O15021 2626 aa5.83□□□□□ -1.48
PBX1-212ENST00000540236 OTOGQ6ZRI0 2925 aa5.83□□□□□ -1.48
PBX1-212ENST00000540236 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
PBX1-212ENST00000540236 FLNCQ14315 2725 aa5.81□□□□□ -1.48
PBX1-212ENST00000540236 PKD1L1Q8TDX9 2849 aa5.81□□□□□ -1.48
PBX1-212ENST00000540236 TGP01266 2768 aa5.8□□□□□ -1.48
PBX1-212ENST00000540236 NOTCH1P46531 2555 aa5.79□□□□□ -1.48
PBX1-212ENST00000540236 COL6A5A8TX70 2615 aa5.77□□□□□ -1.49
PBX1-212ENST00000540236 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
PBX1-212ENST00000540236 LYSTQ99698 3801 aa5.75□□□□□ -1.49
PBX1-212ENST00000540236 PDZD2O15018 2839 aa5.75□□□□□ -1.49
PBX1-212ENST00000540236 J3QL48 77 aa5.73□□□□□ -1.49
PBX1-212ENST00000540236 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
PBX1-212ENST00000540236 ANK2Q01484 3957 aa5.71□□□□□ -1.49
PBX1-212ENST00000540236 IGSF10Q6WRI0 2623 aa5.69□□□□□ -1.5
PBX1-212ENST00000540236 VWFP04275 2813 aa5.67□□□□□ -1.5
PBX1-212ENST00000540236 TENM3Q9P273 2699 aa5.67□□□□□ -1.5
PBX1-212ENST00000540236 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
PBX1-212ENST00000540236 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
PBX1-212ENST00000540236 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
PBX1-212ENST00000540236 ITPR2Q14571 2701 aa5.63□□□□□ -1.51
PBX1-212ENST00000540236 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
PBX1-212ENST00000540236 HUWE1Q7Z6Z7 4374 aaKnown RBP5.62□□□□□ -1.51
PBX1-212ENST00000540236 MGAM2Q2M2H8 2515 aa5.62□□□□□ -1.51
PBX1-212ENST00000540236 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
PBX1-212ENST00000540236 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
PBX1-212ENST00000540236 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
PBX1-212ENST00000540236 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
PBX1-212ENST00000540236 DNAH9Q9NYC9 4486 aa5.53□□□□□ -1.52
PBX1-212ENST00000540236 TENM1Q9UKZ4 2725 aa5.52□□□□□ -1.53
PBX1-212ENST00000540236 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
PBX1-212ENST00000540236 TENM4Q6N022 2769 aa5.42□□□□□ -1.54
PBX1-212ENST00000540236 DNAH7Q8WXX0 4024 aa5.42□□□□□ -1.54
PBX1-212ENST00000540236 XP32Q5T750 250 aa5.42□□□□□ -1.54
PBX1-212ENST00000540236 DNAH17Q9UFH2 4485 aa5.41□□□□□ -1.54
PBX1-212ENST00000540236 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
PBX1-212ENST00000540236 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
PBX1-212ENST00000540236 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
PBX1-212ENST00000540236 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
PBX1-212ENST00000540236 KMT2AQ03164 3969 aa5.36□□□□□ -1.55
PBX1-212ENST00000540236 TNP1P09430 55 aa5.35□□□□□ -1.55
PBX1-212ENST00000540236 Q5VSD8 79 aa5.33□□□□□ -1.56
PBX1-212ENST00000540236 A0A1B0GVY2 172 aa5.33□□□□□ -1.56
PBX1-212ENST00000540236 FBN3Q75N90 2809 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms