RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
UBE3B-212ENST00000540230 JMJD7-PLA2G4BH0Y9G9 81 aa7.82□□□□□ -1.16
UBE3B-212ENST00000540230 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
UBE3B-212ENST00000540230 C9orf118A6NHY6 69 aa7.81□□□□□ -1.16
UBE3B-212ENST00000540230 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
UBE3B-212ENST00000540230 C14orf132Q9NPU4 83 aa7.8□□□□□ -1.16
UBE3B-212ENST00000540230 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
UBE3B-212ENST00000540230 COX6B2Q6YFQ2 88 aa7.78□□□□□ -1.16
UBE3B-212ENST00000540230 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
UBE3B-212ENST00000540230 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
UBE3B-212ENST00000540230 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
UBE3B-212ENST00000540230 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
UBE3B-212ENST00000540230 J3KT08 172 aa7.73□□□□□ -1.17
UBE3B-212ENST00000540230 PDE6GP18545 87 aa7.73□□□□□ -1.17
UBE3B-212ENST00000540230 H3BT86 120 aa7.72□□□□□ -1.17
UBE3B-212ENST00000540230 A0A1B0GW54 56 aa7.71□□□□□ -1.18
UBE3B-212ENST00000540230 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
UBE3B-212ENST00000540230 M0R2T5 61 aa7.68□□□□□ -1.18
UBE3B-212ENST00000540230 IGKV3D-7A0A0C4DH55 119 aa7.68□□□□□ -1.18
UBE3B-212ENST00000540230 A8MWP4 228 aa7.68□□□□□ -1.18
UBE3B-212ENST00000540230 SPCS1Q9Y6A9 102 aa7.68□□□□□ -1.18
UBE3B-212ENST00000540230 NDUFB1O75438 58 aa7.66□□□□□ -1.18
UBE3B-212ENST00000540230 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
UBE3B-212ENST00000540230 NREPQ16612 68 aa7.64□□□□□ -1.19
UBE3B-212ENST00000540230 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
UBE3B-212ENST00000540230 HRES1P13985 223 aa7.62□□□□□ -1.19
UBE3B-212ENST00000540230 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
UBE3B-212ENST00000540230 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
UBE3B-212ENST00000540230 ZCCHC13Q8WW36 166 aaKnown RBP7.61□□□□□ -1.19
UBE3B-212ENST00000540230 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
UBE3B-212ENST00000540230 PRO0461Q9UI25 63 aa7.59□□□□□ -1.19
UBE3B-212ENST00000540230 MMP24-AS1A0A0U1RRL7 71 aa7.57□□□□□ -1.2
UBE3B-212ENST00000540230 K7EQZ3 153 aa7.57□□□□□ -1.2
UBE3B-212ENST00000540230 Q6ZVQ6 151 aa7.57□□□□□ -1.2
UBE3B-212ENST00000540230 K7EP34 96 aa7.57□□□□□ -1.2
UBE3B-212ENST00000540230 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
UBE3B-212ENST00000540230 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
UBE3B-212ENST00000540230 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
UBE3B-212ENST00000540230 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
UBE3B-212ENST00000540230 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
UBE3B-212ENST00000540230 SPINK7P58062 85 aa7.53□□□□□ -1.2
UBE3B-212ENST00000540230 TMEM254Q8TBM7 123 aa7.52□□□□□ -1.2
UBE3B-212ENST00000540230 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.2
UBE3B-212ENST00000540230 RBM12B-AS1Q9P1G2 102 aa7.52□□□□□ -1.2
UBE3B-212ENST00000540230 BPY2O14599 106 aa7.52□□□□□ -1.21
UBE3B-212ENST00000540230 Q8N9L7 120 aa7.51□□□□□ -1.21
UBE3B-212ENST00000540230 hDV103S1A0JD37 113 aa7.49□□□□□ -1.21
UBE3B-212ENST00000540230 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
UBE3B-212ENST00000540230 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
UBE3B-212ENST00000540230 NDUFS5O43920 106 aa7.44□□□□□ -1.22
UBE3B-212ENST00000540230 GTF2H5Q6ZYL4 71 aa7.44□□□□□ -1.22
UBE3B-212ENST00000540230 WFDC13Q8IUB5 93 aa7.44□□□□□ -1.22
UBE3B-212ENST00000540230 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
UBE3B-212ENST00000540230 Q5W150 140 aa7.41□□□□□ -1.22
UBE3B-212ENST00000540230 UBL5Q9BZL1 73 aa7.41□□□□□ -1.22
UBE3B-212ENST00000540230 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
UBE3B-212ENST00000540230 CASC2Q6XLA1 102 aa7.4□□□□□ -1.22
UBE3B-212ENST00000540230 F8W1H4 67 aa7.39□□□□□ -1.23
UBE3B-212ENST00000540230 MT2AP02795 61 aa7.38□□□□□ -1.23
UBE3B-212ENST00000540230 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
UBE3B-212ENST00000540230 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
UBE3B-212ENST00000540230 MT1FP04733 61 aa7.33□□□□□ -1.24
UBE3B-212ENST00000540230 IGKV2-30P06310 120 aa7.33□□□□□ -1.24
UBE3B-212ENST00000540230 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
UBE3B-212ENST00000540230 USH2AO75445 5202 aa7.3□□□□□ -1.24
UBE3B-212ENST00000540230 CXCL6P80162 114 aa7.27□□□□□ -1.25
UBE3B-212ENST00000540230 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
UBE3B-212ENST00000540230 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
UBE3B-212ENST00000540230 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
UBE3B-212ENST00000540230 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
UBE3B-212ENST00000540230 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
UBE3B-212ENST00000540230 FAM240AA0A1B0GVK7 77 aa7.16□□□□□ -1.26
UBE3B-212ENST00000540230 ACYP1P07311 99 aa7.16□□□□□ -1.26
UBE3B-212ENST00000540230 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.27
UBE3B-212ENST00000540230 A0A1B0GV90 55 aa7.15□□□□□ -1.27
UBE3B-212ENST00000540230 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.27
UBE3B-212ENST00000540230 TP53AIP1Q9HCN2 124 aa7.15□□□□□ -1.27
UBE3B-212ENST00000540230 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
UBE3B-212ENST00000540230 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
UBE3B-212ENST00000540230 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
UBE3B-212ENST00000540230 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
UBE3B-212ENST00000540230 A0A087WVE0 104 aa7.04□□□□□ -1.28
UBE3B-212ENST00000540230 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
UBE3B-212ENST00000540230 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
UBE3B-212ENST00000540230 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
UBE3B-212ENST00000540230 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-212ENST00000540230 LINC00643Q86TS7 51 aa7.02□□□□□ -1.29
UBE3B-212ENST00000540230 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
UBE3B-212ENST00000540230 S4R3F8 94 aa7.01□□□□□ -1.29
UBE3B-212ENST00000540230 LCA10Q71F78 164 aa7□□□□□ -1.29
UBE3B-212ENST00000540230 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
UBE3B-212ENST00000540230 UQCRQO14949 82 aa6.96□□□□□ -1.29
UBE3B-212ENST00000540230 H0Y9P7 68 aa6.96□□□□□ -1.3
UBE3B-212ENST00000540230 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
UBE3B-212ENST00000540230 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
UBE3B-212ENST00000540230 ATOX1O00244 68 aa6.9□□□□□ -1.31
UBE3B-212ENST00000540230 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.31
UBE3B-212ENST00000540230 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
UBE3B-212ENST00000540230 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
UBE3B-212ENST00000540230 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms