RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 DSCR10P59022 87 aa6.74□□□□□ -1.33
VTN-202ENST00000539746 Q96NJ1 140 aa6.74□□□□□ -1.33
VTN-202ENST00000539746 A0A087WVE0 104 aa6.73□□□□□ -1.33
VTN-202ENST00000539746 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
VTN-202ENST00000539746 K7EQZ3 153 aa6.72□□□□□ -1.33
VTN-202ENST00000539746 LINC00313P59037 77 aa6.72□□□□□ -1.33
VTN-202ENST00000539746 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
VTN-202ENST00000539746 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
VTN-202ENST00000539746 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
VTN-202ENST00000539746 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
VTN-202ENST00000539746 DEFB116Q30KQ4 102 aa6.71□□□□□ -1.34
VTN-202ENST00000539746 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
VTN-202ENST00000539746 TMEM254Q8TBM7 123 aa6.7□□□□□ -1.34
VTN-202ENST00000539746 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
VTN-202ENST00000539746 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
VTN-202ENST00000539746 HERC2O95714 4834 aa6.66□□□□□ -1.34
VTN-202ENST00000539746 Q8N9L7 120 aa6.65□□□□□ -1.34
VTN-202ENST00000539746 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
VTN-202ENST00000539746 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
VTN-202ENST00000539746 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
VTN-202ENST00000539746 NDUFS5O43920 106 aa6.62□□□□□ -1.35
VTN-202ENST00000539746 TMEM258P61165 79 aa6.62□□□□□ -1.35
VTN-202ENST00000539746 PRR4Q16378 134 aa6.62□□□□□ -1.35
VTN-202ENST00000539746 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
VTN-202ENST00000539746 H3BPC8 53 aa6.61□□□□□ -1.35
VTN-202ENST00000539746 NDUFC1O43677 76 aa6.61□□□□□ -1.35
VTN-202ENST00000539746 MP68P56378 58 aa6.61□□□□□ -1.35
VTN-202ENST00000539746 KLKP1Q107X0 134 aa6.6□□□□□ -1.35
VTN-202ENST00000539746 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
VTN-202ENST00000539746 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
VTN-202ENST00000539746 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
VTN-202ENST00000539746 Q8N9P0 234 aaPredicted RBP6.57□□□□□ -1.36
VTN-202ENST00000539746 KRTAP17-1Q9BYP8 105 aa6.57□□□□□ -1.36
VTN-202ENST00000539746 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
VTN-202ENST00000539746 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
VTN-202ENST00000539746 RETNLBQ9BQ08 111 aa6.56□□□□□ -1.36
VTN-202ENST00000539746 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
VTN-202ENST00000539746 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
VTN-202ENST00000539746 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
VTN-202ENST00000539746 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
VTN-202ENST00000539746 Q75L30 129 aa6.54□□□□□ -1.36
VTN-202ENST00000539746 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
VTN-202ENST00000539746 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
VTN-202ENST00000539746 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
VTN-202ENST00000539746 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
VTN-202ENST00000539746 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.36
VTN-202ENST00000539746 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
VTN-202ENST00000539746 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
VTN-202ENST00000539746 A8MUU9 505 aa6.5□□□□□ -1.37
VTN-202ENST00000539746 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
VTN-202ENST00000539746 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
VTN-202ENST00000539746 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
VTN-202ENST00000539746 TNXBP22105 4242 aa6.49□□□□□ -1.37
VTN-202ENST00000539746 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
VTN-202ENST00000539746 H7BZZ5 65 aa6.48□□□□□ -1.37
VTN-202ENST00000539746 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
VTN-202ENST00000539746 H0Y9P7 68 aa6.47□□□□□ -1.37
VTN-202ENST00000539746 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
VTN-202ENST00000539746 LRP1Q07954 4544 aaKnown RBP6.47□□□□□ -1.37
VTN-202ENST00000539746 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
VTN-202ENST00000539746 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
VTN-202ENST00000539746 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
VTN-202ENST00000539746 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
VTN-202ENST00000539746 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
VTN-202ENST00000539746 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
VTN-202ENST00000539746 XP32Q5T750 250 aa6.44□□□□□ -1.38
VTN-202ENST00000539746 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
VTN-202ENST00000539746 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
VTN-202ENST00000539746 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
VTN-202ENST00000539746 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
VTN-202ENST00000539746 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.38
VTN-202ENST00000539746 Q5W150 140 aa6.35□□□□□ -1.39
VTN-202ENST00000539746 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
VTN-202ENST00000539746 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
VTN-202ENST00000539746 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
VTN-202ENST00000539746 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
VTN-202ENST00000539746 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
VTN-202ENST00000539746 A8MUN3 132 aa6.28□□□□□ -1.4
VTN-202ENST00000539746 SPINK7P58062 85 aa6.27□□□□□ -1.41
VTN-202ENST00000539746 HERC1Q15751 4861 aa6.26□□□□□ -1.41
VTN-202ENST00000539746 RBM12B-AS1Q9P1G2 102 aa6.26□□□□□ -1.41
VTN-202ENST00000539746 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
VTN-202ENST00000539746 ACYP2P14621 99 aa6.2□□□□□ -1.42
VTN-202ENST00000539746 HRES1P13985 223 aa6.18□□□□□ -1.42
VTN-202ENST00000539746 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
VTN-202ENST00000539746 V9GYY9 64 aa6.15□□□□□ -1.42
VTN-202ENST00000539746 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
VTN-202ENST00000539746 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
VTN-202ENST00000539746 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
VTN-202ENST00000539746 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
VTN-202ENST00000539746 Q1T7F1 81 aa6.1□□□□□ -1.43
VTN-202ENST00000539746 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
VTN-202ENST00000539746 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
VTN-202ENST00000539746 COA5Q86WW8 74 aa6.03□□□□□ -1.44
VTN-202ENST00000539746 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
VTN-202ENST00000539746 LRP2P98164 4655 aa5.99□□□□□ -1.45
VTN-202ENST00000539746 SVIPQ8NHG7 77 aa5.99□□□□□ -1.45
VTN-202ENST00000539746 S4R3F8 94 aa5.99□□□□□ -1.45
VTN-202ENST00000539746 LPAP08519 4548 aa5.96□□□□□ -1.46
VTN-202ENST00000539746 SEC61GP60059 68 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms