RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PRO0628Q9UI54 55 aa8.33□□□□□ -1.08
UBE3B-210ENST00000539599 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
UBE3B-210ENST00000539599 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
UBE3B-210ENST00000539599 CD164Q04900 197 aa8.3□□□□□ -1.08
UBE3B-210ENST00000539599 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
UBE3B-210ENST00000539599 A8MU10 97 aa8.3□□□□□ -1.08
UBE3B-210ENST00000539599 A8MUN3 132 aa8.3□□□□□ -1.08
UBE3B-210ENST00000539599 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
UBE3B-210ENST00000539599 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
UBE3B-210ENST00000539599 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.08
UBE3B-210ENST00000539599 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
UBE3B-210ENST00000539599 Q1T7F1 81 aa8.27□□□□□ -1.09
UBE3B-210ENST00000539599 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
UBE3B-210ENST00000539599 Q5W150 140 aa8.24□□□□□ -1.09
UBE3B-210ENST00000539599 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
UBE3B-210ENST00000539599 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
UBE3B-210ENST00000539599 H3BPC8 53 aa8.22□□□□□ -1.09
UBE3B-210ENST00000539599 COA5Q86WW8 74 aa8.22□□□□□ -1.09
UBE3B-210ENST00000539599 SPANXA2-OT1Q8N9U9 137 aa8.22□□□□□ -1.09
UBE3B-210ENST00000539599 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
UBE3B-210ENST00000539599 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
UBE3B-210ENST00000539599 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
UBE3B-210ENST00000539599 Q5VV11 94 aa8.18□□□□□ -1.1
UBE3B-210ENST00000539599 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
UBE3B-210ENST00000539599 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
UBE3B-210ENST00000539599 KRTAP13-2Q52LG2 175 aa8.17□□□□□ -1.1
UBE3B-210ENST00000539599 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
UBE3B-210ENST00000539599 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
UBE3B-210ENST00000539599 FAT1Q14517 4588 aa8.12□□□□□ -1.11
UBE3B-210ENST00000539599 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
UBE3B-210ENST00000539599 HRES1P13985 223 aa8.12□□□□□ -1.11
UBE3B-210ENST00000539599 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
UBE3B-210ENST00000539599 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
UBE3B-210ENST00000539599 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
UBE3B-210ENST00000539599 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
UBE3B-210ENST00000539599 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
UBE3B-210ENST00000539599 LINC00313P59037 77 aa8.05□□□□□ -1.12
UBE3B-210ENST00000539599 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
UBE3B-210ENST00000539599 V9GYY9 64 aa8.04□□□□□ -1.12
UBE3B-210ENST00000539599 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
UBE3B-210ENST00000539599 Q6ZSA8 131 aa8.03□□□□□ -1.12
UBE3B-210ENST00000539599 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
UBE3B-210ENST00000539599 LCA10Q71F78 164 aa8.01□□□□□ -1.13
UBE3B-210ENST00000539599 A6NED7 52 aa8□□□□□ -1.13
UBE3B-210ENST00000539599 SPTSSBQ8NFR3 76 aa7.99□□□□□ -1.13
UBE3B-210ENST00000539599 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
UBE3B-210ENST00000539599 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
UBE3B-210ENST00000539599 SPINK7P58062 85 aa7.96□□□□□ -1.13
UBE3B-210ENST00000539599 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
UBE3B-210ENST00000539599 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
UBE3B-210ENST00000539599 Q75L30 129 aa7.95□□□□□ -1.14
UBE3B-210ENST00000539599 IGKV2D-30A0A075B6S6 120 aa7.95□□□□□ -1.14
UBE3B-210ENST00000539599 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
UBE3B-210ENST00000539599 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
UBE3B-210ENST00000539599 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
UBE3B-210ENST00000539599 TYMSOSQ8TAI1 123 aa7.92□□□□□ -1.14
UBE3B-210ENST00000539599 PMAIP1Q13794 54 aa7.91□□□□□ -1.14
UBE3B-210ENST00000539599 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
UBE3B-210ENST00000539599 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
UBE3B-210ENST00000539599 ACYP2P14621 99 aa7.87□□□□□ -1.15
UBE3B-210ENST00000539599 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
UBE3B-210ENST00000539599 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
UBE3B-210ENST00000539599 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
UBE3B-210ENST00000539599 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
UBE3B-210ENST00000539599 RYR2Q92736 4967 aa7.82□□□□□ -1.16
UBE3B-210ENST00000539599 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
UBE3B-210ENST00000539599 Q8N1X5 172 aa7.81□□□□□ -1.16
UBE3B-210ENST00000539599 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
UBE3B-210ENST00000539599 SPINK1P00995 79 aa7.79□□□□□ -1.16
UBE3B-210ENST00000539599 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
UBE3B-210ENST00000539599 C7orf65Q6ZTY9 151 aa7.78□□□□□ -1.16
UBE3B-210ENST00000539599 ATP11AUNQ6ZP68 121 aa7.75□□□□□ -1.17
UBE3B-210ENST00000539599 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
UBE3B-210ENST00000539599 A6NN06 94 aa7.73□□□□□ -1.17
UBE3B-210ENST00000539599 A0A1B0GU69 56 aa7.72□□□□□ -1.17
UBE3B-210ENST00000539599 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-210ENST00000539599 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
UBE3B-210ENST00000539599 HSPG2P98160 4391 aa7.66□□□□□ -1.18
UBE3B-210ENST00000539599 KTN1-AS1Q86SY8 53 aa7.65□□□□□ -1.18
UBE3B-210ENST00000539599 A0A1B0GVY2 172 aa7.65□□□□□ -1.19
UBE3B-210ENST00000539599 RYR3Q15413 4870 aa7.64□□□□□ -1.19
UBE3B-210ENST00000539599 SEC61GP60059 68 aa7.64□□□□□ -1.19
UBE3B-210ENST00000539599 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
UBE3B-210ENST00000539599 TNXBP22105 4242 aa7.61□□□□□ -1.19
UBE3B-210ENST00000539599 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
UBE3B-210ENST00000539599 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
UBE3B-210ENST00000539599 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
UBE3B-210ENST00000539599 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-210ENST00000539599 MIR22HGQ0VDD5 57 aa7.56□□□□□ -1.2
UBE3B-210ENST00000539599 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
UBE3B-210ENST00000539599 A8MUU9 505 aa7.54□□□□□ -1.2
UBE3B-210ENST00000539599 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
UBE3B-210ENST00000539599 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
UBE3B-210ENST00000539599 UQCR11O14957 56 aa7.52□□□□□ -1.21
UBE3B-210ENST00000539599 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
UBE3B-210ENST00000539599 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
UBE3B-210ENST00000539599 LPAP08519 4548 aa7.49□□□□□ -1.21
UBE3B-210ENST00000539599 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
UBE3B-210ENST00000539599 RYR1P21817 5038 aa7.47□□□□□ -1.21
UBE3B-210ENST00000539599 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms