RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 C21orf62-AS1Q17RA5 79 aa5.26□□□□□ -1.57
RTN4IP1-204ENST00000539449 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
RTN4IP1-204ENST00000539449 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
RTN4IP1-204ENST00000539449 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
RTN4IP1-204ENST00000539449 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
RTN4IP1-204ENST00000539449 A0A1B0GW54 56 aa5.25□□□□□ -1.57
RTN4IP1-204ENST00000539449 NREPQ16612 68 aa5.25□□□□□ -1.57
RTN4IP1-204ENST00000539449 Q96NJ1 140 aa5.25□□□□□ -1.57
RTN4IP1-204ENST00000539449 MT-ATP8P03928 68 aa5.24□□□□□ -1.57
RTN4IP1-204ENST00000539449 UBL5Q9BZL1 73 aa5.24□□□□□ -1.57
RTN4IP1-204ENST00000539449 LINC00472Q9H8W2 130 aa5.24□□□□□ -1.57
RTN4IP1-204ENST00000539449 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
RTN4IP1-204ENST00000539449 A0A0U1RQV1 116 aa5.23□□□□□ -1.57
RTN4IP1-204ENST00000539449 LINC00643Q86TS7 51 aa5.23□□□□□ -1.57
RTN4IP1-204ENST00000539449 DSCR10P59022 87 aa5.21□□□□□ -1.58
RTN4IP1-204ENST00000539449 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
RTN4IP1-204ENST00000539449 SPINK1P00995 79 aa5.2□□□□□ -1.58
RTN4IP1-204ENST00000539449 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
RTN4IP1-204ENST00000539449 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
RTN4IP1-204ENST00000539449 Q5XG85 94 aa5.2□□□□□ -1.58
RTN4IP1-204ENST00000539449 Q8N9L7 120 aa5.2□□□□□ -1.58
RTN4IP1-204ENST00000539449 BPY2O14599 106 aa5.19□□□□□ -1.58
RTN4IP1-204ENST00000539449 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
RTN4IP1-204ENST00000539449 SS18L2Q9UHA2 77 aa5.19□□□□□ -1.58
RTN4IP1-204ENST00000539449 IGKV4-1P06312 121 aa5.18□□□□□ -1.58
RTN4IP1-204ENST00000539449 SIGMAR1Q99720 223 aa5.18□□□□□ -1.58
RTN4IP1-204ENST00000539449 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
RTN4IP1-204ENST00000539449 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
RTN4IP1-204ENST00000539449 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
RTN4IP1-204ENST00000539449 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
RTN4IP1-204ENST00000539449 CXCL6P80162 114 aa5.16□□□□□ -1.58
RTN4IP1-204ENST00000539449 A0A087WVE0 104 aa5.15□□□□□ -1.59
RTN4IP1-204ENST00000539449 K7EQZ3 153 aa5.15□□□□□ -1.59
RTN4IP1-204ENST00000539449 ATP5EP2Q5VTU8 51 aa5.15□□□□□ -1.59
RTN4IP1-204ENST00000539449 A8MWP4 228 aa5.13□□□□□ -1.59
RTN4IP1-204ENST00000539449 J3KT08 172 aa5.13□□□□□ -1.59
RTN4IP1-204ENST00000539449 HIST1H4AP62805 103 aaKnown RBP5.13□□□□□ -1.59
RTN4IP1-204ENST00000539449 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
RTN4IP1-204ENST00000539449 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
RTN4IP1-204ENST00000539449 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
RTN4IP1-204ENST00000539449 IGHV6-1A0A0B4J1U7 121 aa5.1□□□□□ -1.59
RTN4IP1-204ENST00000539449 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
RTN4IP1-204ENST00000539449 IMUPQ9GZP8 106 aa5.1□□□□□ -1.59
RTN4IP1-204ENST00000539449 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
RTN4IP1-204ENST00000539449 C8orf17Q9NRJ1 99 aa5.09□□□□□ -1.59
RTN4IP1-204ENST00000539449 NDUFB1O75438 58 aa5.08□□□□□ -1.6
RTN4IP1-204ENST00000539449 WFDC13Q8IUB5 93 aa5.08□□□□□ -1.6
RTN4IP1-204ENST00000539449 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
RTN4IP1-204ENST00000539449 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
RTN4IP1-204ENST00000539449 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
RTN4IP1-204ENST00000539449 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
RTN4IP1-204ENST00000539449 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
RTN4IP1-204ENST00000539449 C9orf92A6NGG3 77 aa5.05□□□□□ -1.6
RTN4IP1-204ENST00000539449 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
RTN4IP1-204ENST00000539449 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
RTN4IP1-204ENST00000539449 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
RTN4IP1-204ENST00000539449 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
RTN4IP1-204ENST00000539449 C8orf87E5RJ46 101 aa5.03□□□□□ -1.6
RTN4IP1-204ENST00000539449 LINC00313P59037 77 aa5.03□□□□□ -1.6
RTN4IP1-204ENST00000539449 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
RTN4IP1-204ENST00000539449 PRR4Q16378 134 aa5.02□□□□□ -1.61
RTN4IP1-204ENST00000539449 FP248Q71RG6 208 aaPredicted RBP5.02□□□□□ -1.61
RTN4IP1-204ENST00000539449 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
RTN4IP1-204ENST00000539449 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
RTN4IP1-204ENST00000539449 MRPL34Q9BQ48 92 aaKnown RBP5□□□□□ -1.61
RTN4IP1-204ENST00000539449 SCGB1A1P11684 91 aa4.99□□□□□ -1.61
RTN4IP1-204ENST00000539449 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
RTN4IP1-204ENST00000539449 OCR1Q9BZK8 76 aa4.97□□□□□ -1.61
RTN4IP1-204ENST00000539449 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
RTN4IP1-204ENST00000539449 ATOX1O00244 68 aa4.95□□□□□ -1.62
RTN4IP1-204ENST00000539449 NDUFS5O43920 106 aa4.95□□□□□ -1.62
RTN4IP1-204ENST00000539449 A8MUU9 505 aa4.94□□□□□ -1.62
RTN4IP1-204ENST00000539449 Q5W150 140 aa4.94□□□□□ -1.62
RTN4IP1-204ENST00000539449 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
RTN4IP1-204ENST00000539449 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
RTN4IP1-204ENST00000539449 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
RTN4IP1-204ENST00000539449 TPRXLQ17RH7 258 aa4.92□□□□□ -1.62
RTN4IP1-204ENST00000539449 ANAPC13Q9BS18 74 aa4.92□□□□□ -1.62
RTN4IP1-204ENST00000539449 SERP2Q8N6R1 65 aa4.91□□□□□ -1.62
RTN4IP1-204ENST00000539449 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
RTN4IP1-204ENST00000539449 UQCRQO14949 82 aa4.89□□□□□ -1.63
RTN4IP1-204ENST00000539449 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
RTN4IP1-204ENST00000539449 Q75L30 129 aa4.89□□□□□ -1.63
RTN4IP1-204ENST00000539449 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
RTN4IP1-204ENST00000539449 COX7CP15954 63 aa4.88□□□□□ -1.63
RTN4IP1-204ENST00000539449 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
RTN4IP1-204ENST00000539449 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
RTN4IP1-204ENST00000539449 H0Y9P7 68 aa4.87□□□□□ -1.63
RTN4IP1-204ENST00000539449 ZCCHC13Q8WW36 166 aaKnown RBP4.87□□□□□ -1.63
RTN4IP1-204ENST00000539449 PCP4P48539 62 aa4.86□□□□□ -1.63
RTN4IP1-204ENST00000539449 TRAV22A0A0B4J277 110 aa4.85□□□□□ -1.63
RTN4IP1-204ENST00000539449 H3BS24 57 aa4.85□□□□□ -1.63
RTN4IP1-204ENST00000539449 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
RTN4IP1-204ENST00000539449 C20orf197Q8N268 126 aa4.84□□□□□ -1.63
RTN4IP1-204ENST00000539449 LINC00208Q96KT6 92 aa4.84□□□□□ -1.63
RTN4IP1-204ENST00000539449 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.63
RTN4IP1-204ENST00000539449 SNURFQ9Y675 71 aa4.84□□□□□ -1.63
RTN4IP1-204ENST00000539449 PCOTHQ58A44 107 aa4.83□□□□□ -1.64
RTN4IP1-204ENST00000539449 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
RTN4IP1-204ENST00000539449 MP68P56378 58 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms