RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 NDUFB1O75438 58 aa4.3□□□□□ -1.72
LMO3-220ENST00000539232 COX7BP24311 80 aa4.3□□□□□ -1.72
LMO3-220ENST00000539232 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
LMO3-220ENST00000539232 DIRC1Q969H9 104 aa4.3□□□□□ -1.72
LMO3-220ENST00000539232 A0A087X002 238 aa4.29□□□□□ -1.72
LMO3-220ENST00000539232 NDUFS5O43920 106 aa4.29□□□□□ -1.72
LMO3-220ENST00000539232 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
LMO3-220ENST00000539232 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
LMO3-220ENST00000539232 M0R378 163 aa4.28□□□□□ -1.72
LMO3-220ENST00000539232 ELOF1P60002 83 aaKnown RBP4.28□□□□□ -1.72
LMO3-220ENST00000539232 PRLHP81277 87 aa4.28□□□□□ -1.72
LMO3-220ENST00000539232 FAM229BQ4G0N7 80 aa4.27□□□□□ -1.73
LMO3-220ENST00000539232 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
LMO3-220ENST00000539232 KRTAP13-2Q52LG2 175 aa4.27□□□□□ -1.73
LMO3-220ENST00000539232 IGLV6-57P01721 117 aa4.26□□□□□ -1.73
LMO3-220ENST00000539232 IGKV4-1P06312 121 aa4.26□□□□□ -1.73
LMO3-220ENST00000539232 UBE2AP49459 152 aa4.26□□□□□ -1.73
LMO3-220ENST00000539232 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
LMO3-220ENST00000539232 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
LMO3-220ENST00000539232 ZCCHC13Q8WW36 166 aaKnown RBP4.25□□□□□ -1.73
LMO3-220ENST00000539232 LIMD2Q9BT23 127 aa4.25□□□□□ -1.73
LMO3-220ENST00000539232 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
LMO3-220ENST00000539232 H3BPC8 53 aa4.24□□□□□ -1.73
LMO3-220ENST00000539232 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
LMO3-220ENST00000539232 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
LMO3-220ENST00000539232 Q6ZQY7 126 aa4.23□□□□□ -1.73
LMO3-220ENST00000539232 C1orf64Q8NEQ6 169 aa4.23□□□□□ -1.73
LMO3-220ENST00000539232 ETDCA0A1B0GVM5 59 aa4.22□□□□□ -1.73
LMO3-220ENST00000539232 KRTAP4-16G5E9R7 235 aaPredicted RBP4.22□□□□□ -1.73
LMO3-220ENST00000539232 SPANXA2-OT1Q8N9U9 137 aa4.22□□□□□ -1.73
LMO3-220ENST00000539232 Q9BRP9 147 aa4.21□□□□□ -1.74
LMO3-220ENST00000539232 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
LMO3-220ENST00000539232 SPRR1AP35321 89 aa4.2□□□□□ -1.74
LMO3-220ENST00000539232 KCNQ1DNQ9H478 68 aa4.2□□□□□ -1.74
LMO3-220ENST00000539232 ZNF73O43830 326 aaPredicted RBP4.19□□□□□ -1.74
LMO3-220ENST00000539232 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
LMO3-220ENST00000539232 SPRR4Q96PI1 79 aa4.19□□□□□ -1.74
LMO3-220ENST00000539232 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
LMO3-220ENST00000539232 Q75L30 129 aa4.18□□□□□ -1.74
LMO3-220ENST00000539232 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
LMO3-220ENST00000539232 IGLV5-48A0A075B6I7 105 aa4.17□□□□□ -1.74
LMO3-220ENST00000539232 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
LMO3-220ENST00000539232 HCG22E2RYF7 251 aa4.17□□□□□ -1.74
LMO3-220ENST00000539232 MP68P56378 58 aa4.17□□□□□ -1.74
LMO3-220ENST00000539232 PRR4Q16378 134 aa4.17□□□□□ -1.74
LMO3-220ENST00000539232 Q5VV11 94 aa4.16□□□□□ -1.74
LMO3-220ENST00000539232 PSPHP1O15172 72 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 SMIM29Q86T20 159 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 LINC00304Q8N9R0 145 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 CDC42SE1Q9NRR8 79 aa4.15□□□□□ -1.75
LMO3-220ENST00000539232 A8MUN3 132 aa4.14□□□□□ -1.75
LMO3-220ENST00000539232 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
LMO3-220ENST00000539232 A6NN06 94 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 LINC00483Q53H64 154 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 Q6ZRX8 168 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 LCA10Q71F78 164 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
LMO3-220ENST00000539232 C4orf48Q5BLP8 95 aa4.12□□□□□ -1.75
LMO3-220ENST00000539232 Q8NBF4 154 aa4.12□□□□□ -1.75
LMO3-220ENST00000539232 IGLV9-49A0A0B4J1Y8 123 aa4.1□□□□□ -1.75
LMO3-220ENST00000539232 MOBPQ13875 183 aa4.1□□□□□ -1.75
LMO3-220ENST00000539232 Q8N9L7 120 aa4.1□□□□□ -1.75
LMO3-220ENST00000539232 A0A0G2JQZ4 141 aa4.09□□□□□ -1.75
LMO3-220ENST00000539232 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
LMO3-220ENST00000539232 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
LMO3-220ENST00000539232 A6NED7 52 aa4.08□□□□□ -1.76
LMO3-220ENST00000539232 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
LMO3-220ENST00000539232 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
LMO3-220ENST00000539232 DSCR10P59022 87 aa4.07□□□□□ -1.76
LMO3-220ENST00000539232 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
LMO3-220ENST00000539232 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
LMO3-220ENST00000539232 Q8N377 158 aa4.06□□□□□ -1.76
LMO3-220ENST00000539232 SPTSSBQ8NFR3 76 aa4.06□□□□□ -1.76
LMO3-220ENST00000539232 SPRR1BP22528 89 aa4.05□□□□□ -1.76
LMO3-220ENST00000539232 DEFB105AQ8NG35 78 aa4.05□□□□□ -1.76
LMO3-220ENST00000539232 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
LMO3-220ENST00000539232 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
LMO3-220ENST00000539232 SPAG11AQ6PDA7 123 aa4.04□□□□□ -1.76
LMO3-220ENST00000539232 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
LMO3-220ENST00000539232 IGLV8-61A0A075B6I0 122 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 H0Y9P7 68 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 K7EQZ3 153 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 CASC2Q6XLA1 102 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 SSBP3-AS1Q7Z2R9 100 aa4.03□□□□□ -1.76
LMO3-220ENST00000539232 SPINK1P00995 79 aa4.02□□□□□ -1.77
LMO3-220ENST00000539232 COA5Q86WW8 74 aa4.02□□□□□ -1.77
LMO3-220ENST00000539232 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
LMO3-220ENST00000539232 A8MU10 97 aa3.97□□□□□ -1.77
LMO3-220ENST00000539232 A8MWP4 228 aa3.97□□□□□ -1.77
LMO3-220ENST00000539232 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
LMO3-220ENST00000539232 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
LMO3-220ENST00000539232 XP32Q5T750 250 aa3.96□□□□□ -1.78
LMO3-220ENST00000539232 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
LMO3-220ENST00000539232 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms