RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 HERC1Q15751 4861 aa4.77□□□□□ -1.65
LPCAT3-208ENST00000538987 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
LPCAT3-208ENST00000538987 KRTAP13-3Q3SY46 172 aa4.76□□□□□ -1.65
LPCAT3-208ENST00000538987 A8MWP4 228 aa4.75□□□□□ -1.65
LPCAT3-208ENST00000538987 DSCR10P59022 87 aa4.75□□□□□ -1.65
LPCAT3-208ENST00000538987 LINC00313P59037 77 aa4.75□□□□□ -1.65
LPCAT3-208ENST00000538987 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
LPCAT3-208ENST00000538987 K7ERU9 68 aa4.74□□□□□ -1.65
LPCAT3-208ENST00000538987 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
LPCAT3-208ENST00000538987 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
LPCAT3-208ENST00000538987 K7EQZ3 153 aa4.72□□□□□ -1.65
LPCAT3-208ENST00000538987 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
LPCAT3-208ENST00000538987 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
LPCAT3-208ENST00000538987 Q8N9L7 120 aa4.71□□□□□ -1.66
LPCAT3-208ENST00000538987 CXCL6P80162 114 aa4.7□□□□□ -1.66
LPCAT3-208ENST00000538987 XP32Q5T750 250 aa4.7□□□□□ -1.66
LPCAT3-208ENST00000538987 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
LPCAT3-208ENST00000538987 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
LPCAT3-208ENST00000538987 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
LPCAT3-208ENST00000538987 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
LPCAT3-208ENST00000538987 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
LPCAT3-208ENST00000538987 WFDC13Q8IUB5 93 aa4.67□□□□□ -1.66
LPCAT3-208ENST00000538987 LPAP08519 4548 aa4.67□□□□□ -1.66
LPCAT3-208ENST00000538987 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
LPCAT3-208ENST00000538987 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
LPCAT3-208ENST00000538987 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
LPCAT3-208ENST00000538987 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
LPCAT3-208ENST00000538987 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.67
LPCAT3-208ENST00000538987 NDUFS5O43920 106 aa4.65□□□□□ -1.67
LPCAT3-208ENST00000538987 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
LPCAT3-208ENST00000538987 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.67
LPCAT3-208ENST00000538987 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
LPCAT3-208ENST00000538987 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
LPCAT3-208ENST00000538987 Q75L30 129 aa4.64□□□□□ -1.67
LPCAT3-208ENST00000538987 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
LPCAT3-208ENST00000538987 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
LPCAT3-208ENST00000538987 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
LPCAT3-208ENST00000538987 A8MUU9 505 aa4.62□□□□□ -1.67
LPCAT3-208ENST00000538987 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
LPCAT3-208ENST00000538987 A0A087WVE0 104 aa4.6□□□□□ -1.67
LPCAT3-208ENST00000538987 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
LPCAT3-208ENST00000538987 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
LPCAT3-208ENST00000538987 LRP2P98164 4655 aa4.59□□□□□ -1.68
LPCAT3-208ENST00000538987 MT-ATP8P03928 68 aa4.58□□□□□ -1.68
LPCAT3-208ENST00000538987 SCGB1A1P11684 91 aa4.56□□□□□ -1.68
LPCAT3-208ENST00000538987 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
LPCAT3-208ENST00000538987 IMUPQ9GZP8 106 aa4.56□□□□□ -1.68
LPCAT3-208ENST00000538987 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
LPCAT3-208ENST00000538987 Q5W150 140 aa4.51□□□□□ -1.69
LPCAT3-208ENST00000538987 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
LPCAT3-208ENST00000538987 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
LPCAT3-208ENST00000538987 FAM236AA0A1B0GUQ0 79 aa4.49□□□□□ -1.69
LPCAT3-208ENST00000538987 FAM236BA0A1B0GV22 79 aa4.49□□□□□ -1.69
LPCAT3-208ENST00000538987 UQCRQO14949 82 aa4.49□□□□□ -1.69
LPCAT3-208ENST00000538987 SPINK7P58062 85 aa4.49□□□□□ -1.69
LPCAT3-208ENST00000538987 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
LPCAT3-208ENST00000538987 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
LPCAT3-208ENST00000538987 LORP23490 312 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-208ENST00000538987 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
LPCAT3-208ENST00000538987 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
LPCAT3-208ENST00000538987 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
LPCAT3-208ENST00000538987 H0Y9P7 68 aa4.45□□□□□ -1.7
LPCAT3-208ENST00000538987 MP68P56378 58 aa4.45□□□□□ -1.7
LPCAT3-208ENST00000538987 C7orf65Q6ZTY9 151 aa4.45□□□□□ -1.7
LPCAT3-208ENST00000538987 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
LPCAT3-208ENST00000538987 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
LPCAT3-208ENST00000538987 ATOX1O00244 68 aa4.44□□□□□ -1.7
LPCAT3-208ENST00000538987 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
LPCAT3-208ENST00000538987 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
LPCAT3-208ENST00000538987 C5orf47Q569G3 176 aa4.43□□□□□ -1.7
LPCAT3-208ENST00000538987 COX6B2Q6YFQ2 88 aa4.43□□□□□ -1.7
LPCAT3-208ENST00000538987 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
LPCAT3-208ENST00000538987 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
LPCAT3-208ENST00000538987 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
LPCAT3-208ENST00000538987 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
LPCAT3-208ENST00000538987 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
LPCAT3-208ENST00000538987 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
LPCAT3-208ENST00000538987 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
LPCAT3-208ENST00000538987 HRES1P13985 223 aa4.4□□□□□ -1.71
LPCAT3-208ENST00000538987 MUC2Q02817 5179 aa4.4□□□□□ -1.71
LPCAT3-208ENST00000538987 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
LPCAT3-208ENST00000538987 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
LPCAT3-208ENST00000538987 H3BPC8 53 aa4.37□□□□□ -1.71
LPCAT3-208ENST00000538987 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
LPCAT3-208ENST00000538987 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
LPCAT3-208ENST00000538987 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
LPCAT3-208ENST00000538987 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
LPCAT3-208ENST00000538987 KLKP1Q107X0 134 aa4.32□□□□□ -1.72
LPCAT3-208ENST00000538987 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
LPCAT3-208ENST00000538987 C20orf197Q8N268 126 aa4.32□□□□□ -1.72
LPCAT3-208ENST00000538987 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
LPCAT3-208ENST00000538987 M0R2T5 61 aa4.31□□□□□ -1.72
LPCAT3-208ENST00000538987 COX7CP15954 63 aa4.31□□□□□ -1.72
LPCAT3-208ENST00000538987 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
LPCAT3-208ENST00000538987 MT1HP80294 61 aa4.27□□□□□ -1.73
LPCAT3-208ENST00000538987 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
LPCAT3-208ENST00000538987 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
LPCAT3-208ENST00000538987 A8MUN3 132 aa4.23□□□□□ -1.73
LPCAT3-208ENST00000538987 S4R3F8 94 aa4.22□□□□□ -1.73
LPCAT3-208ENST00000538987 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms