RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
CDCA3-207ENST00000538862 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
CDCA3-207ENST00000538862 C8orf87E5RJ46 101 aa8.8□□□□□ -1
CDCA3-207ENST00000538862 H0Y9P7 68 aa8.8□□□□□ -1
CDCA3-207ENST00000538862 KRTAP10-2P60368 255 aa8.8□□□□□ -1
CDCA3-207ENST00000538862 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
CDCA3-207ENST00000538862 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
CDCA3-207ENST00000538862 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
CDCA3-207ENST00000538862 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
CDCA3-207ENST00000538862 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
CDCA3-207ENST00000538862 SPANXA2-OT1Q8N9U9 137 aa8.78□□□□□ -1
CDCA3-207ENST00000538862 RYR1P21817 5038 aa8.77□□□□□ -1
CDCA3-207ENST00000538862 Q96NJ1 140 aa8.77□□□□□ -1.01
CDCA3-207ENST00000538862 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
CDCA3-207ENST00000538862 PLAC8Q9NZF1 115 aa8.75□□□□□ -1.01
CDCA3-207ENST00000538862 C7orf65Q6ZTY9 151 aa8.74□□□□□ -1.01
CDCA3-207ENST00000538862 LCA10Q71F78 164 aa8.74□□□□□ -1.01
CDCA3-207ENST00000538862 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
CDCA3-207ENST00000538862 PSORS1C2Q9UIG4 136 aa8.74□□□□□ -1.01
CDCA3-207ENST00000538862 HSPG2P98160 4391 aa8.73□□□□□ -1.01
CDCA3-207ENST00000538862 MOBPQ13875 183 aa8.73□□□□□ -1.01
CDCA3-207ENST00000538862 PRR4Q16378 134 aa8.73□□□□□ -1.01
CDCA3-207ENST00000538862 APOBP04114 4563 aaKnown RBP8.72□□□□□ -1.01
CDCA3-207ENST00000538862 A6NN06 94 aa8.72□□□□□ -1.01
CDCA3-207ENST00000538862 PSPHP1O15172 72 aa8.72□□□□□ -1.01
CDCA3-207ENST00000538862 ZNF861PO60384 105 aa8.72□□□□□ -1.01
CDCA3-207ENST00000538862 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
CDCA3-207ENST00000538862 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
CDCA3-207ENST00000538862 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
CDCA3-207ENST00000538862 Q5VV11 94 aa8.68□□□□□ -1.02
CDCA3-207ENST00000538862 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
CDCA3-207ENST00000538862 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
CDCA3-207ENST00000538862 A8MUN3 132 aa8.65□□□□□ -1.02
CDCA3-207ENST00000538862 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
CDCA3-207ENST00000538862 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
CDCA3-207ENST00000538862 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
CDCA3-207ENST00000538862 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
CDCA3-207ENST00000538862 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
CDCA3-207ENST00000538862 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
CDCA3-207ENST00000538862 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
CDCA3-207ENST00000538862 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
CDCA3-207ENST00000538862 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
CDCA3-207ENST00000538862 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
CDCA3-207ENST00000538862 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
CDCA3-207ENST00000538862 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
CDCA3-207ENST00000538862 Q75L30 129 aa8.58□□□□□ -1.04
CDCA3-207ENST00000538862 SPTSSBQ8NFR3 76 aa8.58□□□□□ -1.04
CDCA3-207ENST00000538862 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
CDCA3-207ENST00000538862 FAT1Q14517 4588 aa8.56□□□□□ -1.04
CDCA3-207ENST00000538862 A8MU10 97 aa8.56□□□□□ -1.04
CDCA3-207ENST00000538862 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
CDCA3-207ENST00000538862 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
CDCA3-207ENST00000538862 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
CDCA3-207ENST00000538862 COA5Q86WW8 74 aa8.54□□□□□ -1.04
CDCA3-207ENST00000538862 Q8N1X5 172 aa8.54□□□□□ -1.04
CDCA3-207ENST00000538862 Q8N9P0 234 aaPredicted RBP8.54□□□□□ -1.04
CDCA3-207ENST00000538862 A0A087X002 238 aa8.53□□□□□ -1.04
CDCA3-207ENST00000538862 SMR3BP02814 79 aaPredicted RBP8.53□□□□□ -1.04
CDCA3-207ENST00000538862 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
CDCA3-207ENST00000538862 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
CDCA3-207ENST00000538862 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
CDCA3-207ENST00000538862 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
CDCA3-207ENST00000538862 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
CDCA3-207ENST00000538862 A6NED7 52 aa8.47□□□□□ -1.05
CDCA3-207ENST00000538862 Q6ZSA8 131 aa8.47□□□□□ -1.05
CDCA3-207ENST00000538862 VPS13BQ7Z7G8 4022 aa8.47□□□□□ -1.05
CDCA3-207ENST00000538862 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
CDCA3-207ENST00000538862 Q5VSD8 79 aa8.46□□□□□ -1.05
CDCA3-207ENST00000538862 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
CDCA3-207ENST00000538862 Q5W150 140 aa8.42□□□□□ -1.06
CDCA3-207ENST00000538862 FLG2Q5D862 2391 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-207ENST00000538862 HRES1P13985 223 aa8.4□□□□□ -1.06
CDCA3-207ENST00000538862 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
CDCA3-207ENST00000538862 LINC00313P59037 77 aa8.39□□□□□ -1.07
CDCA3-207ENST00000538862 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
CDCA3-207ENST00000538862 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
CDCA3-207ENST00000538862 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
CDCA3-207ENST00000538862 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
CDCA3-207ENST00000538862 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
CDCA3-207ENST00000538862 ACYP2P14621 99 aa8.31□□□□□ -1.08
CDCA3-207ENST00000538862 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-207ENST00000538862 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
CDCA3-207ENST00000538862 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-207ENST00000538862 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
CDCA3-207ENST00000538862 HERC1Q15751 4861 aa8.26□□□□□ -1.09
CDCA3-207ENST00000538862 IGKV2-30P06310 120 aa8.26□□□□□ -1.09
CDCA3-207ENST00000538862 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
CDCA3-207ENST00000538862 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
CDCA3-207ENST00000538862 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
CDCA3-207ENST00000538862 PRAC1Q96KF2 57 aa8.21□□□□□ -1.1
CDCA3-207ENST00000538862 SPINK1P00995 79 aa8.2□□□□□ -1.1
CDCA3-207ENST00000538862 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
CDCA3-207ENST00000538862 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
CDCA3-207ENST00000538862 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
CDCA3-207ENST00000538862 J3QL48 77 aa8.16□□□□□ -1.1
CDCA3-207ENST00000538862 SPINK7P58062 85 aa8.15□□□□□ -1.11
CDCA3-207ENST00000538862 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
CDCA3-207ENST00000538862 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
CDCA3-207ENST00000538862 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
CDCA3-207ENST00000538862 A0A1B0GU69 56 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 712 ms