RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 C4orf48Q5BLP8 95 aa11.78□□□□□ -0.52
DDX55-205ENST00000538744 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
DDX55-205ENST00000538744 PRR26Q8N8Z3 221 aa11.74□□□□□ -0.53
DDX55-205ENST00000538744 C1orf195Q5TG92 126 aa11.74□□□□□ -0.53
DDX55-205ENST00000538744 SPINK1P00995 79 aa11.73□□□□□ -0.53
DDX55-205ENST00000538744 MP68P56378 58 aa11.72□□□□□ -0.53
DDX55-205ENST00000538744 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.54
DDX55-205ENST00000538744 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
DDX55-205ENST00000538744 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
DDX55-205ENST00000538744 C8orf87E5RJ46 101 aa11.69□□□□□ -0.54
DDX55-205ENST00000538744 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
DDX55-205ENST00000538744 ZCCHC13Q8WW36 166 aaKnown RBP11.69□□□□□ -0.54
DDX55-205ENST00000538744 LINC00304Q8N9R0 145 aa11.69□□□□□ -0.54
DDX55-205ENST00000538744 TP53AIP1Q9HCN2 124 aa11.69□□□□□ -0.54
DDX55-205ENST00000538744 H0Y9P7 68 aa11.68□□□□□ -0.54
DDX55-205ENST00000538744 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
DDX55-205ENST00000538744 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
DDX55-205ENST00000538744 RPS29P62273 56 aaKnown RBP11.66□□□□□ -0.54
DDX55-205ENST00000538744 H3BPC8 53 aa11.65□□□□□ -0.54
DDX55-205ENST00000538744 NDUFS5O43920 106 aa11.64□□□□□ -0.55
DDX55-205ENST00000538744 TRAV22A0A0B4J277 110 aa11.63□□□□□ -0.55
DDX55-205ENST00000538744 LINC00208Q96KT6 92 aa11.63□□□□□ -0.55
DDX55-205ENST00000538744 ATP5EP56381 51 aaPredicted RBP11.62□□□□□ -0.55
DDX55-205ENST00000538744 LINC00313P59037 77 aa11.6□□□□□ -0.55
DDX55-205ENST00000538744 RPS28P62857 69 aaKnown RBP11.57□□□□□ -0.56
DDX55-205ENST00000538744 FAT1Q14517 4588 aa11.57□□□□□ -0.56
DDX55-205ENST00000538744 C1orf64Q8NEQ6 169 aa11.55□□□□□ -0.56
DDX55-205ENST00000538744 Q5VSD8 79 aa11.55□□□□□ -0.56
DDX55-205ENST00000538744 RYR3Q15413 4870 aa11.51□□□□□ -0.57
DDX55-205ENST00000538744 SERP1Q9Y6X1 66 aa11.5□□□□□ -0.57
DDX55-205ENST00000538744 Q8N9P0 234 aaPredicted RBP11.47□□□□□ -0.57
DDX55-205ENST00000538744 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
DDX55-205ENST00000538744 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.57
DDX55-205ENST00000538744 OXTP01178 125 aa11.43□□□□□ -0.58
DDX55-205ENST00000538744 KRTAP13-3Q3SY46 172 aa11.42□□□□□ -0.58
DDX55-205ENST00000538744 Q5W150 140 aa11.42□□□□□ -0.58
DDX55-205ENST00000538744 SPANXA2-OT1Q8N9U9 137 aa11.39□□□□□ -0.59
DDX55-205ENST00000538744 HSPG2P98160 4391 aa11.39□□□□□ -0.59
DDX55-205ENST00000538744 LOC101927531A0A1B0GV80 90 aa11.38□□□□□ -0.59
DDX55-205ENST00000538744 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
DDX55-205ENST00000538744 KRTAP10-8P60410 259 aa11.35□□□□□ -0.59
DDX55-205ENST00000538744 PRR4Q16378 134 aa11.34□□□□□ -0.59
DDX55-205ENST00000538744 PCOTHQ58A44 107 aa11.34□□□□□ -0.59
DDX55-205ENST00000538744 KRTAP17-1Q9BYP8 105 aa11.33□□□□□ -0.6
DDX55-205ENST00000538744 Q8N1X5 172 aa11.32□□□□□ -0.6
DDX55-205ENST00000538744 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
DDX55-205ENST00000538744 RYR1P21817 5038 aa11.29□□□□□ -0.6
DDX55-205ENST00000538744 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
DDX55-205ENST00000538744 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
DDX55-205ENST00000538744 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
DDX55-205ENST00000538744 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
DDX55-205ENST00000538744 IGKV2-30P06310 120 aa11.21□□□□□ -0.61
DDX55-205ENST00000538744 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
DDX55-205ENST00000538744 A8MUU9 505 aa11.16□□□□□ -0.62
DDX55-205ENST00000538744 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
DDX55-205ENST00000538744 TNXBP22105 4242 aa11.15□□□□□ -0.62
DDX55-205ENST00000538744 KIAA1109Q2LD37 5005 aa11.15□□□□□ -0.63
DDX55-205ENST00000538744 FP248Q71RG6 208 aaPredicted RBP11.13□□□□□ -0.63
DDX55-205ENST00000538744 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
DDX55-205ENST00000538744 IGKV2D-30A0A075B6S6 120 aa11.12□□□□□ -0.63
DDX55-205ENST00000538744 HRES1P13985 223 aa11.1□□□□□ -0.63
DDX55-205ENST00000538744 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
DDX55-205ENST00000538744 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
DDX55-205ENST00000538744 COA5Q86WW8 74 aa11.07□□□□□ -0.64
DDX55-205ENST00000538744 C7orf65Q6ZTY9 151 aa11.04□□□□□ -0.64
DDX55-205ENST00000538744 Q75L30 129 aa11.03□□□□□ -0.64
DDX55-205ENST00000538744 C4orf26Q17RF5 130 aa11.01□□□□□ -0.65
DDX55-205ENST00000538744 MPLKIPQ8TAP9 179 aa11.01□□□□□ -0.65
DDX55-205ENST00000538744 DMAC1Q96GE9 116 aa11□□□□□ -0.65
DDX55-205ENST00000538744 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
DDX55-205ENST00000538744 ACYP2P14621 99 aa10.97□□□□□ -0.65
DDX55-205ENST00000538744 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.65
DDX55-205ENST00000538744 Q1T7F1 81 aa10.95□□□□□ -0.66
DDX55-205ENST00000538744 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
DDX55-205ENST00000538744 V9GYY9 64 aa10.89□□□□□ -0.67
DDX55-205ENST00000538744 XP32Q5T750 250 aa10.87□□□□□ -0.67
DDX55-205ENST00000538744 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
DDX55-205ENST00000538744 ATP11AUNQ6ZP68 121 aa10.86□□□□□ -0.67
DDX55-205ENST00000538744 SPINK7P58062 85 aa10.85□□□□□ -0.67
DDX55-205ENST00000538744 CHKB-CPT1BH3BT56 60 aa10.82□□□□□ -0.68
DDX55-205ENST00000538744 A8MUN3 132 aa10.79□□□□□ -0.68
DDX55-205ENST00000538744 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
DDX55-205ENST00000538744 PSPHP1O15172 72 aa10.74□□□□□ -0.69
DDX55-205ENST00000538744 LINC01558Q9Y6Z2 57 aa10.71□□□□□ -0.69
DDX55-205ENST00000538744 PRR15LQ9BU68 103 aa10.7□□□□□ -0.7
DDX55-205ENST00000538744 J3QL48 77 aa10.68□□□□□ -0.7
DDX55-205ENST00000538744 Q5VV11 94 aa10.64□□□□□ -0.71
DDX55-205ENST00000538744 KRTAP3-1Q9BYR8 98 aa10.64□□□□□ -0.71
DDX55-205ENST00000538744 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
DDX55-205ENST00000538744 BIRC6Q9NR09 4857 aa10.59□□□□□ -0.71
DDX55-205ENST00000538744 HERC2O95714 4834 aa10.55□□□□□ -0.72
DDX55-205ENST00000538744 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
DDX55-205ENST00000538744 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
DDX55-205ENST00000538744 BRK1Q8WUW1 75 aa10.53□□□□□ -0.72
DDX55-205ENST00000538744 A0A1B0GU69 56 aa10.47□□□□□ -0.73
DDX55-205ENST00000538744 PRO0628Q9UI54 55 aa10.43□□□□□ -0.74
DDX55-205ENST00000538744 A6NED7 52 aa10.42□□□□□ -0.74
DDX55-205ENST00000538744 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
DDX55-205ENST00000538744 LRP2P98164 4655 aa10.37□□□□□ -0.75
DDX55-205ENST00000538744 LPAP08519 4548 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms