RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
TNFRSF1A-211ENST00000538363 J3KT08 172 aa6.14□□□□□ -1.43
TNFRSF1A-211ENST00000538363 NDUFB1O75438 58 aa6.14□□□□□ -1.43
TNFRSF1A-211ENST00000538363 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
TNFRSF1A-211ENST00000538363 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
TNFRSF1A-211ENST00000538363 LINC00643Q86TS7 51 aa6.13□□□□□ -1.43
TNFRSF1A-211ENST00000538363 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
TNFRSF1A-211ENST00000538363 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
TNFRSF1A-211ENST00000538363 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
TNFRSF1A-211ENST00000538363 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
TNFRSF1A-211ENST00000538363 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
TNFRSF1A-211ENST00000538363 Q5XG85 94 aa6.11□□□□□ -1.43
TNFRSF1A-211ENST00000538363 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
TNFRSF1A-211ENST00000538363 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
TNFRSF1A-211ENST00000538363 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
TNFRSF1A-211ENST00000538363 ATP5EP2Q5VTU8 51 aa6.1□□□□□ -1.43
TNFRSF1A-211ENST00000538363 C1orf195Q5TG92 126 aa6.09□□□□□ -1.43
TNFRSF1A-211ENST00000538363 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
TNFRSF1A-211ENST00000538363 HERC1Q15751 4861 aa6.08□□□□□ -1.44
TNFRSF1A-211ENST00000538363 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
TNFRSF1A-211ENST00000538363 CXCL6P80162 114 aa6.07□□□□□ -1.44
TNFRSF1A-211ENST00000538363 PRR4Q16378 134 aa6.07□□□□□ -1.44
TNFRSF1A-211ENST00000538363 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
TNFRSF1A-211ENST00000538363 A8MWP4 228 aa6.05□□□□□ -1.44
TNFRSF1A-211ENST00000538363 Q96NJ1 140 aa6.03□□□□□ -1.44
TNFRSF1A-211ENST00000538363 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
TNFRSF1A-211ENST00000538363 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
TNFRSF1A-211ENST00000538363 A0A1B0GVX0 72 aa6.02□□□□□ -1.45
TNFRSF1A-211ENST00000538363 DSCR10P59022 87 aa6.02□□□□□ -1.45
TNFRSF1A-211ENST00000538363 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
TNFRSF1A-211ENST00000538363 Q8N9L7 120 aa6.02□□□□□ -1.45
TNFRSF1A-211ENST00000538363 TNXBP22105 4242 aa6.01□□□□□ -1.45
TNFRSF1A-211ENST00000538363 K7EQZ3 153 aa6.01□□□□□ -1.45
TNFRSF1A-211ENST00000538363 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
TNFRSF1A-211ENST00000538363 LINC00313P59037 77 aa6.01□□□□□ -1.45
TNFRSF1A-211ENST00000538363 C8orf87E5RJ46 101 aa6□□□□□ -1.45
TNFRSF1A-211ENST00000538363 PRR15Q8IV56 129 aa6□□□□□ -1.45
TNFRSF1A-211ENST00000538363 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
TNFRSF1A-211ENST00000538363 SCGB1A1P11684 91 aa5.98□□□□□ -1.45
TNFRSF1A-211ENST00000538363 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
TNFRSF1A-211ENST00000538363 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
TNFRSF1A-211ENST00000538363 CASC2Q6XLA1 102 aa5.97□□□□□ -1.45
TNFRSF1A-211ENST00000538363 C8orf17Q9NRJ1 99 aa5.97□□□□□ -1.45
TNFRSF1A-211ENST00000538363 HCG22E2RYF7 251 aa5.96□□□□□ -1.46
TNFRSF1A-211ENST00000538363 NDUFS5O43920 106 aa5.96□□□□□ -1.46
TNFRSF1A-211ENST00000538363 A0A087WVE0 104 aa5.95□□□□□ -1.46
TNFRSF1A-211ENST00000538363 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
TNFRSF1A-211ENST00000538363 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
TNFRSF1A-211ENST00000538363 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
TNFRSF1A-211ENST00000538363 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
TNFRSF1A-211ENST00000538363 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
TNFRSF1A-211ENST00000538363 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
TNFRSF1A-211ENST00000538363 FAM236AA0A1B0GUQ0 79 aa5.89□□□□□ -1.47
TNFRSF1A-211ENST00000538363 FAM236BA0A1B0GV22 79 aa5.89□□□□□ -1.47
TNFRSF1A-211ENST00000538363 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
TNFRSF1A-211ENST00000538363 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
TNFRSF1A-211ENST00000538363 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
TNFRSF1A-211ENST00000538363 ATOX1O00244 68 aa5.84□□□□□ -1.47
TNFRSF1A-211ENST00000538363 ATP11AUNQ6ZP68 121 aa5.84□□□□□ -1.47
TNFRSF1A-211ENST00000538363 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
TNFRSF1A-211ENST00000538363 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
TNFRSF1A-211ENST00000538363 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
TNFRSF1A-211ENST00000538363 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
TNFRSF1A-211ENST00000538363 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
TNFRSF1A-211ENST00000538363 UQCRQO14949 82 aa5.8□□□□□ -1.48
TNFRSF1A-211ENST00000538363 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
TNFRSF1A-211ENST00000538363 MP68P56378 58 aa5.79□□□□□ -1.48
TNFRSF1A-211ENST00000538363 Q75L30 129 aa5.79□□□□□ -1.48
TNFRSF1A-211ENST00000538363 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
TNFRSF1A-211ENST00000538363 ANAPC13Q9BS18 74 aa5.79□□□□□ -1.48
TNFRSF1A-211ENST00000538363 A8MUU9 505 aa5.78□□□□□ -1.48
TNFRSF1A-211ENST00000538363 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
TNFRSF1A-211ENST00000538363 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
TNFRSF1A-211ENST00000538363 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
TNFRSF1A-211ENST00000538363 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
TNFRSF1A-211ENST00000538363 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
TNFRSF1A-211ENST00000538363 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
TNFRSF1A-211ENST00000538363 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
TNFRSF1A-211ENST00000538363 H0Y9P7 68 aa5.75□□□□□ -1.49
TNFRSF1A-211ENST00000538363 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
TNFRSF1A-211ENST00000538363 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
TNFRSF1A-211ENST00000538363 SERP2Q8N6R1 65 aa5.74□□□□□ -1.49
TNFRSF1A-211ENST00000538363 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
TNFRSF1A-211ENST00000538363 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
TNFRSF1A-211ENST00000538363 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
TNFRSF1A-211ENST00000538363 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
TNFRSF1A-211ENST00000538363 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
TNFRSF1A-211ENST00000538363 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.5
TNFRSF1A-211ENST00000538363 Q5W150 140 aa5.7□□□□□ -1.5
TNFRSF1A-211ENST00000538363 LPAP08519 4548 aa5.7□□□□□ -1.5
TNFRSF1A-211ENST00000538363 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
TNFRSF1A-211ENST00000538363 H3BPC8 53 aa5.68□□□□□ -1.5
TNFRSF1A-211ENST00000538363 COX7CP15954 63 aa5.68□□□□□ -1.5
TNFRSF1A-211ENST00000538363 LOC101927531A0A1B0GV80 90 aa5.67□□□□□ -1.5
TNFRSF1A-211ENST00000538363 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
TNFRSF1A-211ENST00000538363 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
TNFRSF1A-211ENST00000538363 LRP2P98164 4655 aa5.66□□□□□ -1.5
TNFRSF1A-211ENST00000538363 SPINK7P58062 85 aa5.64□□□□□ -1.51
TNFRSF1A-211ENST00000538363 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
TNFRSF1A-211ENST00000538363 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms