RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 PDE6GP18545 87 aa11.01□□□□□ -0.65
CCDC78-215ENST00000538176 A0A1B0GVX0 72 aa11□□□□□ -0.65
CCDC78-215ENST00000538176 Q6ZQT0 140 aa11□□□□□ -0.65
CCDC78-215ENST00000538176 NOTCH2NLQ7Z3S9 236 aa10.99□□□□□ -0.65
CCDC78-215ENST00000538176 FLGP20930 4061 aaPredicted RBP10.97□□□□□ -0.65
CCDC78-215ENST00000538176 TSTD3H0UI37 97 aa10.97□□□□□ -0.65
CCDC78-215ENST00000538176 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.65
CCDC78-215ENST00000538176 NDUFB1O75438 58 aa10.96□□□□□ -0.65
CCDC78-215ENST00000538176 NAA38Q9BRA0 125 aaKnown RBP10.93□□□□□ -0.66
CCDC78-215ENST00000538176 CRCT1Q9UGL9 99 aa10.91□□□□□ -0.66
CCDC78-215ENST00000538176 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
CCDC78-215ENST00000538176 FAM236DA0A1B0GTK5 79 aa10.86□□□□□ -0.67
CCDC78-215ENST00000538176 FAM236CP0DP71 79 aa10.86□□□□□ -0.67
CCDC78-215ENST00000538176 A8MWP4 228 aa10.85□□□□□ -0.67
CCDC78-215ENST00000538176 FSIP2Q5CZC0 6907 aa10.85□□□□□ -0.67
CCDC78-215ENST00000538176 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
CCDC78-215ENST00000538176 BATFQ16520 125 aa10.83□□□□□ -0.68
CCDC78-215ENST00000538176 Q8N9P0 234 aaPredicted RBP10.82□□□□□ -0.68
CCDC78-215ENST00000538176 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
CCDC78-215ENST00000538176 ZCCHC13Q8WW36 166 aaKnown RBP10.82□□□□□ -0.68
CCDC78-215ENST00000538176 HRES1P13985 223 aa10.81□□□□□ -0.68
CCDC78-215ENST00000538176 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
CCDC78-215ENST00000538176 NREPQ16612 68 aa10.8□□□□□ -0.68
CCDC78-215ENST00000538176 C9orf118A6NHY6 69 aa10.79□□□□□ -0.68
CCDC78-215ENST00000538176 H3BT86 120 aa10.78□□□□□ -0.68
CCDC78-215ENST00000538176 C8orf17Q9NRJ1 99 aa10.78□□□□□ -0.68
CCDC78-215ENST00000538176 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
CCDC78-215ENST00000538176 PRR15Q8IV56 129 aa10.74□□□□□ -0.69
CCDC78-215ENST00000538176 A0A1W2PPM0 123 aa10.73□□□□□ -0.69
CCDC78-215ENST00000538176 SPINK7P58062 85 aa10.73□□□□□ -0.69
CCDC78-215ENST00000538176 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
CCDC78-215ENST00000538176 Q6ZVQ6 151 aa10.72□□□□□ -0.69
CCDC78-215ENST00000538176 KRTAP9-8Q9BYQ0 159 aa10.71□□□□□ -0.69
CCDC78-215ENST00000538176 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
CCDC78-215ENST00000538176 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
CCDC78-215ENST00000538176 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
CCDC78-215ENST00000538176 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
CCDC78-215ENST00000538176 hDV103S1A0JD37 113 aa10.59□□□□□ -0.71
CCDC78-215ENST00000538176 BPY2O14599 106 aa10.59□□□□□ -0.71
CCDC78-215ENST00000538176 SPCS1Q9Y6A9 102 aa10.58□□□□□ -0.72
CCDC78-215ENST00000538176 K7EQZ3 153 aa10.56□□□□□ -0.72
CCDC78-215ENST00000538176 WFDC13Q8IUB5 93 aa10.54□□□□□ -0.72
CCDC78-215ENST00000538176 MT2AP02795 61 aa10.53□□□□□ -0.72
CCDC78-215ENST00000538176 NDUFS5O43920 106 aa10.52□□□□□ -0.73
CCDC78-215ENST00000538176 COL5A1-AS1Q5SY13 56 aa10.51□□□□□ -0.73
CCDC78-215ENST00000538176 KRTAP10-10P60014 251 aa10.46□□□□□ -0.73
CCDC78-215ENST00000538176 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-215ENST00000538176 MT1FP04733 61 aa10.43□□□□□ -0.74
CCDC78-215ENST00000538176 UBL5Q9BZL1 73 aa10.43□□□□□ -0.74
CCDC78-215ENST00000538176 CASC2Q6XLA1 102 aa10.42□□□□□ -0.74
CCDC78-215ENST00000538176 K7EP34 96 aa10.39□□□□□ -0.75
CCDC78-215ENST00000538176 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
CCDC78-215ENST00000538176 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
CCDC78-215ENST00000538176 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
CCDC78-215ENST00000538176 KRTAP9-3Q9BYQ3 159 aa10.37□□□□□ -0.75
CCDC78-215ENST00000538176 CXCL6P80162 114 aa10.36□□□□□ -0.75
CCDC78-215ENST00000538176 Q8N9L7 120 aa10.36□□□□□ -0.75
CCDC78-215ENST00000538176 IGKV2D-30A0A075B6S6 120 aa10.35□□□□□ -0.75
CCDC78-215ENST00000538176 HCG22E2RYF7 251 aa10.35□□□□□ -0.75
CCDC78-215ENST00000538176 IGKV2-30P06310 120 aa10.35□□□□□ -0.75
CCDC78-215ENST00000538176 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
CCDC78-215ENST00000538176 Q5W150 140 aa10.34□□□□□ -0.75
CCDC78-215ENST00000538176 GTF2H5Q6ZYL4 71 aa10.34□□□□□ -0.75
CCDC78-215ENST00000538176 USH2AO75445 5202 aa10.3□□□□□ -0.76
CCDC78-215ENST00000538176 F8W1H4 67 aa10.28□□□□□ -0.76
CCDC78-215ENST00000538176 LCE2BO14633 110 aa10.28□□□□□ -0.76
CCDC78-215ENST00000538176 SSPOA2VEC9 5147 aa10.19□□□□□ -0.78
CCDC78-215ENST00000538176 TP53AIP1Q9HCN2 124 aa10.19□□□□□ -0.78
CCDC78-215ENST00000538176 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
CCDC78-215ENST00000538176 ETDBQ3ZM63 59 aa10.16□□□□□ -0.78
CCDC78-215ENST00000538176 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
CCDC78-215ENST00000538176 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
CCDC78-215ENST00000538176 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.12□□□□□ -0.79
CCDC78-215ENST00000538176 ACYP1P07311 99 aa10.06□□□□□ -0.8
CCDC78-215ENST00000538176 C1orf64Q8NEQ6 169 aa10.02□□□□□ -0.81
CCDC78-215ENST00000538176 KRTAP9-7A8MTY7 169 aa10.01□□□□□ -0.81
CCDC78-215ENST00000538176 FCGBPQ9Y6R7 5405 aaPredicted RBP10□□□□□ -0.81
CCDC78-215ENST00000538176 KRTAP19-6Q3LI70 58 aa10□□□□□ -0.81
CCDC78-215ENST00000538176 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
CCDC78-215ENST00000538176 S4R3F8 94 aa9.98□□□□□ -0.81
CCDC78-215ENST00000538176 CSAG1Q6PB30 78 aa9.97□□□□□ -0.81
CCDC78-215ENST00000538176 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
CCDC78-215ENST00000538176 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
CCDC78-215ENST00000538176 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
CCDC78-215ENST00000538176 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
CCDC78-215ENST00000538176 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.82
CCDC78-215ENST00000538176 FAM236AA0A1B0GUQ0 79 aa9.89□□□□□ -0.83
CCDC78-215ENST00000538176 FAM236BA0A1B0GV22 79 aa9.89□□□□□ -0.83
CCDC78-215ENST00000538176 LOC101927531A0A1B0GV80 90 aa9.88□□□□□ -0.83
CCDC78-215ENST00000538176 LCA10Q71F78 164 aa9.88□□□□□ -0.83
CCDC78-215ENST00000538176 HIST1H4AP62805 103 aaKnown RBP9.84□□□□□ -0.83
CCDC78-215ENST00000538176 UQCRQO14949 82 aa9.82□□□□□ -0.84
CCDC78-215ENST00000538176 ATOX1O00244 68 aa9.81□□□□□ -0.84
CCDC78-215ENST00000538176 LINC00643Q86TS7 51 aa9.76□□□□□ -0.85
CCDC78-215ENST00000538176 H0Y9P7 68 aa9.71□□□□□ -0.86
CCDC78-215ENST00000538176 SPRR2GQ9BYE4 73 aa9.71□□□□□ -0.86
CCDC78-215ENST00000538176 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
CCDC78-215ENST00000538176 MACF1Q9UPN3 7388 aaKnown RBP9.71□□□□□ -0.86
CCDC78-215ENST00000538176 KLKP1Q107X0 134 aa9.7□□□□□ -0.86
CCDC78-215ENST00000538176 Q5VV11 94 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms