RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 MOBPQ13875 183 aa3.27□□□□□ -1.89
NPIPB3-208ENST00000537983 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
NPIPB3-208ENST00000537983 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
NPIPB3-208ENST00000537983 FAM229BQ4G0N7 80 aa3.26□□□□□ -1.89
NPIPB3-208ENST00000537983 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
NPIPB3-208ENST00000537983 RYR2Q92736 4967 aa3.25□□□□□ -1.89
NPIPB3-208ENST00000537983 A0A0G2JQZ4 141 aa3.25□□□□□ -1.89
NPIPB3-208ENST00000537983 IGKV4-1P06312 121 aa3.25□□□□□ -1.89
NPIPB3-208ENST00000537983 LRP1BQ9NZR2 4599 aa3.25□□□□□ -1.89
NPIPB3-208ENST00000537983 J3KT08 172 aa3.24□□□□□ -1.89
NPIPB3-208ENST00000537983 CD164Q04900 197 aa3.24□□□□□ -1.89
NPIPB3-208ENST00000537983 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
NPIPB3-208ENST00000537983 SMIM20Q8N5G0 67 aa3.24□□□□□ -1.89
NPIPB3-208ENST00000537983 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 VPS13BQ7Z7G8 4022 aa3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 DSCR10P59022 87 aa3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 ANAPC11Q9NYG5 84 aa3.23□□□□□ -1.89
NPIPB3-208ENST00000537983 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 K7EQZ3 153 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 UQCRQO14949 82 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 COX7CP15954 63 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 Q8N9L7 120 aa3.22□□□□□ -1.89
NPIPB3-208ENST00000537983 TRAV7A0A075B6U4 112 aa3.21□□□□□ -1.9
NPIPB3-208ENST00000537983 A8MWP4 228 aa3.21□□□□□ -1.9
NPIPB3-208ENST00000537983 KRTAP13-2Q52LG2 175 aa3.21□□□□□ -1.9
NPIPB3-208ENST00000537983 Q96NJ1 140 aa3.21□□□□□ -1.9
NPIPB3-208ENST00000537983 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 ASB16-AS1Q495Z4 193 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 Q5XG85 94 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
NPIPB3-208ENST00000537983 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-208ENST00000537983 NDUFB1O75438 58 aa3.19□□□□□ -1.9
NPIPB3-208ENST00000537983 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
NPIPB3-208ENST00000537983 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
NPIPB3-208ENST00000537983 DEFB116Q30KQ4 102 aa3.18□□□□□ -1.9
NPIPB3-208ENST00000537983 OCR1Q9BZK8 76 aa3.18□□□□□ -1.9
NPIPB3-208ENST00000537983 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
NPIPB3-208ENST00000537983 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
NPIPB3-208ENST00000537983 RPS29P62273 56 aaKnown RBP3.17□□□□□ -1.9
NPIPB3-208ENST00000537983 TYMSOSQ8TAI1 123 aa3.17□□□□□ -1.9
NPIPB3-208ENST00000537983 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
NPIPB3-208ENST00000537983 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
NPIPB3-208ENST00000537983 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
NPIPB3-208ENST00000537983 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
NPIPB3-208ENST00000537983 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
NPIPB3-208ENST00000537983 SPINK1P00995 79 aa3.15□□□□□ -1.91
NPIPB3-208ENST00000537983 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
NPIPB3-208ENST00000537983 LINC00304Q8N9R0 145 aa3.15□□□□□ -1.91
NPIPB3-208ENST00000537983 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
NPIPB3-208ENST00000537983 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 KLKP1Q107X0 134 aa3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
NPIPB3-208ENST00000537983 IGHV6-1A0A0B4J1U7 121 aa3.13□□□□□ -1.91
NPIPB3-208ENST00000537983 NDUFC1O43677 76 aa3.13□□□□□ -1.91
NPIPB3-208ENST00000537983 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
NPIPB3-208ENST00000537983 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
NPIPB3-208ENST00000537983 Q5VSD8 79 aa3.13□□□□□ -1.91
NPIPB3-208ENST00000537983 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
NPIPB3-208ENST00000537983 TMEM258P61165 79 aa3.12□□□□□ -1.91
NPIPB3-208ENST00000537983 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
NPIPB3-208ENST00000537983 TP53AIP1Q9HCN2 124 aa3.12□□□□□ -1.91
NPIPB3-208ENST00000537983 RYR3Q15413 4870 aa3.11□□□□□ -1.91
NPIPB3-208ENST00000537983 H3BPC8 53 aa3.11□□□□□ -1.91
NPIPB3-208ENST00000537983 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
NPIPB3-208ENST00000537983 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
NPIPB3-208ENST00000537983 HSPG2P98160 4391 aa3.1□□□□□ -1.91
NPIPB3-208ENST00000537983 TRAV22A0A0B4J277 110 aa3.1□□□□□ -1.91
NPIPB3-208ENST00000537983 MP68P56378 58 aa3.1□□□□□ -1.91
NPIPB3-208ENST00000537983 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
NPIPB3-208ENST00000537983 RYR1P21817 5038 aa3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 H0Y9P7 68 aa3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 H7BZZ5 65 aa3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 ZCCHC13Q8WW36 166 aaKnown RBP3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
NPIPB3-208ENST00000537983 FAT1Q14517 4588 aa3.09□□□□□ -1.92
NPIPB3-208ENST00000537983 NDUFS5O43920 106 aa3.08□□□□□ -1.92
NPIPB3-208ENST00000537983 LINC00313P59037 77 aa3.08□□□□□ -1.92
NPIPB3-208ENST00000537983 FAM236DA0A1B0GTK5 79 aa3.07□□□□□ -1.92
NPIPB3-208ENST00000537983 FAM236CP0DP71 79 aa3.07□□□□□ -1.92
NPIPB3-208ENST00000537983 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
NPIPB3-208ENST00000537983 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
NPIPB3-208ENST00000537983 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
NPIPB3-208ENST00000537983 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
NPIPB3-208ENST00000537983 TNXBP22105 4242 aa3.05□□□□□ -1.92
NPIPB3-208ENST00000537983 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
NPIPB3-208ENST00000537983 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
NPIPB3-208ENST00000537983 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
NPIPB3-208ENST00000537983 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.92
NPIPB3-208ENST00000537983 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms