RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
CHD4-207ENST00000537634 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
CHD4-207ENST00000537634 TMEM256-PLSCR3K7ERE1 68 aa4.86□□□□□ -1.63
CHD4-207ENST00000537634 CCKP06307 115 aa4.86□□□□□ -1.63
CHD4-207ENST00000537634 DEFB116Q30KQ4 102 aa4.86□□□□□ -1.63
CHD4-207ENST00000537634 COX6CP09669 75 aa4.85□□□□□ -1.63
CHD4-207ENST00000537634 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
CHD4-207ENST00000537634 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 K7ERJ3 54 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 MT2AP02795 61 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 HRES1P13985 223 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 HSD52Q0P140 79 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
CHD4-207ENST00000537634 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
CHD4-207ENST00000537634 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
CHD4-207ENST00000537634 UBE2V1Q13404 147 aa4.82□□□□□ -1.64
CHD4-207ENST00000537634 VPS25Q9BRG1 176 aa4.82□□□□□ -1.64
CHD4-207ENST00000537634 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
CHD4-207ENST00000537634 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
CHD4-207ENST00000537634 MT1FP04733 61 aa4.8□□□□□ -1.64
CHD4-207ENST00000537634 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
CHD4-207ENST00000537634 MTURNQ8N3F0 131 aa4.8□□□□□ -1.64
CHD4-207ENST00000537634 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
CHD4-207ENST00000537634 DSCR8Q96T75 97 aa4.79□□□□□ -1.64
CHD4-207ENST00000537634 J3KT08 172 aa4.77□□□□□ -1.65
CHD4-207ENST00000537634 SCGB1C2P0DMR2 95 aa4.77□□□□□ -1.65
CHD4-207ENST00000537634 PYY3Q5JQD4 70 aa4.77□□□□□ -1.65
CHD4-207ENST00000537634 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
CHD4-207ENST00000537634 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
CHD4-207ENST00000537634 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
CHD4-207ENST00000537634 C9JAW5 83 aa4.75□□□□□ -1.65
CHD4-207ENST00000537634 SPINK7P58062 85 aa4.75□□□□□ -1.65
CHD4-207ENST00000537634 NDUFB1O75438 58 aa4.74□□□□□ -1.65
CHD4-207ENST00000537634 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
CHD4-207ENST00000537634 USH2AO75445 5202 aa4.74□□□□□ -1.65
CHD4-207ENST00000537634 BAALC-AS2P0C853 105 aa4.73□□□□□ -1.65
CHD4-207ENST00000537634 Q6ZQT0 140 aa4.73□□□□□ -1.65
CHD4-207ENST00000537634 LYRM7Q5U5X0 104 aa4.72□□□□□ -1.65
CHD4-207ENST00000537634 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
CHD4-207ENST00000537634 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
CHD4-207ENST00000537634 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
CHD4-207ENST00000537634 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
CHD4-207ENST00000537634 A8MWP4 228 aa4.69□□□□□ -1.66
CHD4-207ENST00000537634 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
CHD4-207ENST00000537634 JMJD7-PLA2G4BH0Y9G9 81 aa4.68□□□□□ -1.66
CHD4-207ENST00000537634 H3BS24 57 aa4.68□□□□□ -1.66
CHD4-207ENST00000537634 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
CHD4-207ENST00000537634 LINC00846Q9NV44 126 aa4.68□□□□□ -1.66
CHD4-207ENST00000537634 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
CHD4-207ENST00000537634 IGKV3D-7A0A0C4DH55 119 aa4.67□□□□□ -1.66
CHD4-207ENST00000537634 A0A1B0GW54 56 aa4.67□□□□□ -1.66
CHD4-207ENST00000537634 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CHD4-207ENST00000537634 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
CHD4-207ENST00000537634 PDE6GP18545 87 aa4.66□□□□□ -1.66
CHD4-207ENST00000537634 Q6ZVQ6 151 aa4.66□□□□□ -1.66
CHD4-207ENST00000537634 TSTD3H0UI37 97 aa4.65□□□□□ -1.67
CHD4-207ENST00000537634 M0R143 59 aa4.64□□□□□ -1.67
CHD4-207ENST00000537634 PRR15Q8IV56 129 aa4.64□□□□□ -1.67
CHD4-207ENST00000537634 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
CHD4-207ENST00000537634 C14orf132Q9NPU4 83 aa4.64□□□□□ -1.67
CHD4-207ENST00000537634 NREPQ16612 68 aa4.62□□□□□ -1.67
CHD4-207ENST00000537634 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
CHD4-207ENST00000537634 TMEM254Q8TBM7 123 aa4.62□□□□□ -1.67
CHD4-207ENST00000537634 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
CHD4-207ENST00000537634 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
CHD4-207ENST00000537634 NDUFS5O43920 106 aa4.6□□□□□ -1.67
CHD4-207ENST00000537634 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
CHD4-207ENST00000537634 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
CHD4-207ENST00000537634 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
CHD4-207ENST00000537634 K7EQZ3 153 aa4.57□□□□□ -1.68
CHD4-207ENST00000537634 SCGB1A1P11684 91 aa4.57□□□□□ -1.68
CHD4-207ENST00000537634 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
CHD4-207ENST00000537634 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
CHD4-207ENST00000537634 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
CHD4-207ENST00000537634 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
CHD4-207ENST00000537634 BPY2O14599 106 aa4.53□□□□□ -1.68
CHD4-207ENST00000537634 H3BT86 120 aa4.52□□□□□ -1.69
CHD4-207ENST00000537634 BATFQ16520 125 aa4.52□□□□□ -1.69
CHD4-207ENST00000537634 Q5W150 140 aa4.51□□□□□ -1.69
CHD4-207ENST00000537634 COL5A1-AS1Q5SY13 56 aa4.5□□□□□ -1.69
CHD4-207ENST00000537634 CASC2Q6XLA1 102 aa4.5□□□□□ -1.69
CHD4-207ENST00000537634 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
CHD4-207ENST00000537634 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
CHD4-207ENST00000537634 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
CHD4-207ENST00000537634 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
CHD4-207ENST00000537634 Q8N9L7 120 aa4.48□□□□□ -1.69
CHD4-207ENST00000537634 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
CHD4-207ENST00000537634 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
CHD4-207ENST00000537634 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
CHD4-207ENST00000537634 K7ERU9 68 aa4.46□□□□□ -1.7
CHD4-207ENST00000537634 CXCL6P80162 114 aa4.46□□□□□ -1.7
CHD4-207ENST00000537634 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
CHD4-207ENST00000537634 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
CHD4-207ENST00000537634 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
CHD4-207ENST00000537634 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
CHD4-207ENST00000537634 TAX1BP3O14907 124 aa4.43□□□□□ -1.7
CHD4-207ENST00000537634 S4R3F8 94 aa4.42□□□□□ -1.7
CHD4-207ENST00000537634 A6NN06 94 aa4.4□□□□□ -1.71
CHD4-207ENST00000537634 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
CHD4-207ENST00000537634 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms