RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
SRGAP1-202ENST00000537556 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
SRGAP1-202ENST00000537556 NUPR2A6NF83 97 aa4.93□□□□□ -1.62
SRGAP1-202ENST00000537556 H0YAA0 97 aa4.93□□□□□ -1.62
SRGAP1-202ENST00000537556 SSBP3-AS1Q7Z2R9 100 aa4.93□□□□□ -1.62
SRGAP1-202ENST00000537556 SPINK6Q6UWN8 80 aa4.93□□□□□ -1.62
SRGAP1-202ENST00000537556 CHTF8P0CG12 524 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 PANO1I0J062 215 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 Q6ZSA8 131 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 SMR3AQ99954 134 aa4.92□□□□□ -1.62
SRGAP1-202ENST00000537556 ACANP16112 2415 aa4.9□□□□□ -1.62
SRGAP1-202ENST00000537556 KRTAP10-3P60369 221 aa4.9□□□□□ -1.63
SRGAP1-202ENST00000537556 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
SRGAP1-202ENST00000537556 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
SRGAP1-202ENST00000537556 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
SRGAP1-202ENST00000537556 A0A1B0GU33 70 aa4.88□□□□□ -1.63
SRGAP1-202ENST00000537556 SPINK1P00995 79 aa4.88□□□□□ -1.63
SRGAP1-202ENST00000537556 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
SRGAP1-202ENST00000537556 A0A087WTM6 91 aa4.87□□□□□ -1.63
SRGAP1-202ENST00000537556 PSORS1C2Q9UIG4 136 aa4.87□□□□□ -1.63
SRGAP1-202ENST00000537556 PKD1L1Q8TDX9 2849 aa4.86□□□□□ -1.63
SRGAP1-202ENST00000537556 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
SRGAP1-202ENST00000537556 TRRAPQ9Y4A5 3859 aa4.84□□□□□ -1.63
SRGAP1-202ENST00000537556 VWFP04275 2813 aa4.84□□□□□ -1.64
SRGAP1-202ENST00000537556 ANK2Q01484 3957 aa4.83□□□□□ -1.64
SRGAP1-202ENST00000537556 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
SRGAP1-202ENST00000537556 FBN1P35555 2871 aaKnown RBP4.83□□□□□ -1.64
SRGAP1-202ENST00000537556 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SRGAP1-202ENST00000537556 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
SRGAP1-202ENST00000537556 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
SRGAP1-202ENST00000537556 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
SRGAP1-202ENST00000537556 DNAH1Q9P2D7 4330 aa4.81□□□□□ -1.64
SRGAP1-202ENST00000537556 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
SRGAP1-202ENST00000537556 FBN3Q75N90 2809 aa4.78□□□□□ -1.64
SRGAP1-202ENST00000537556 ATRQ13535 2644 aa4.77□□□□□ -1.65
SRGAP1-202ENST00000537556 TYMSOSQ8TAI1 123 aa4.77□□□□□ -1.65
SRGAP1-202ENST00000537556 CIRBP-AS1Q8TBR5 109 aa4.77□□□□□ -1.65
SRGAP1-202ENST00000537556 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
SRGAP1-202ENST00000537556 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
SRGAP1-202ENST00000537556 Q8N1X5 172 aa4.75□□□□□ -1.65
SRGAP1-202ENST00000537556 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
SRGAP1-202ENST00000537556 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
SRGAP1-202ENST00000537556 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
SRGAP1-202ENST00000537556 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
SRGAP1-202ENST00000537556 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
SRGAP1-202ENST00000537556 SPACA4Q8TDM5 124 aa4.7□□□□□ -1.66
SRGAP1-202ENST00000537556 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
SRGAP1-202ENST00000537556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
SRGAP1-202ENST00000537556 MEGF8Q7Z7M0 2845 aa4.69□□□□□ -1.66
SRGAP1-202ENST00000537556 TENM3Q9P273 2699 aa4.68□□□□□ -1.66
SRGAP1-202ENST00000537556 NBDYA0A0U1RRE5 68 aa4.68□□□□□ -1.66
SRGAP1-202ENST00000537556 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
SRGAP1-202ENST00000537556 DNAH10Q8IVF4 4471 aa4.67□□□□□ -1.66
SRGAP1-202ENST00000537556 KRTAP10-11P60412 298 aa4.66□□□□□ -1.66
SRGAP1-202ENST00000537556 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.66
SRGAP1-202ENST00000537556 LYSTQ99698 3801 aa4.65□□□□□ -1.66
SRGAP1-202ENST00000537556 UBE2DNLQ8IWF7 75 aa4.65□□□□□ -1.67
SRGAP1-202ENST00000537556 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
SRGAP1-202ENST00000537556 CMYA5Q8N3K9 4069 aa4.61□□□□□ -1.67
SRGAP1-202ENST00000537556 FRAS1Q86XX4 4008 aa4.59□□□□□ -1.67
SRGAP1-202ENST00000537556 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
SRGAP1-202ENST00000537556 TGP01266 2768 aa4.59□□□□□ -1.67
SRGAP1-202ENST00000537556 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
SRGAP1-202ENST00000537556 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
SRGAP1-202ENST00000537556 MGAM2Q2M2H8 2515 aa4.55□□□□□ -1.68
SRGAP1-202ENST00000537556 DNAH9Q9NYC9 4486 aa4.55□□□□□ -1.68
SRGAP1-202ENST00000537556 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
SRGAP1-202ENST00000537556 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
SRGAP1-202ENST00000537556 A0A0D9SG42 100 aa4.53□□□□□ -1.68
SRGAP1-202ENST00000537556 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
SRGAP1-202ENST00000537556 APLNQ9ULZ1 77 aa4.53□□□□□ -1.68
SRGAP1-202ENST00000537556 PRKDCP78527 4128 aaKnown RBP4.5□□□□□ -1.69
SRGAP1-202ENST00000537556 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
SRGAP1-202ENST00000537556 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
SRGAP1-202ENST00000537556 S4R3F8 94 aa4.48□□□□□ -1.69
SRGAP1-202ENST00000537556 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
SRGAP1-202ENST00000537556 STAB2Q8WWQ8 2551 aa4.46□□□□□ -1.7
SRGAP1-202ENST00000537556 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
SRGAP1-202ENST00000537556 XP32Q5T750 250 aa4.45□□□□□ -1.7
SRGAP1-202ENST00000537556 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
SRGAP1-202ENST00000537556 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
SRGAP1-202ENST00000537556 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.71
SRGAP1-202ENST00000537556 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
SRGAP1-202ENST00000537556 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
SRGAP1-202ENST00000537556 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
SRGAP1-202ENST00000537556 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
SRGAP1-202ENST00000537556 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
SRGAP1-202ENST00000537556 DNAH7Q8WXX0 4024 aa4.34□□□□□ -1.71
SRGAP1-202ENST00000537556 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
SRGAP1-202ENST00000537556 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
SRGAP1-202ENST00000537556 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.72
SRGAP1-202ENST00000537556 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
SRGAP1-202ENST00000537556 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
SRGAP1-202ENST00000537556 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
SRGAP1-202ENST00000537556 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
SRGAP1-202ENST00000537556 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
SRGAP1-202ENST00000537556 PLECQ15149 4684 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms