RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 COX6CP09669 75 aa5.03□□□□□ -1.6
CCDC170-202ENST00000537358 C2orf91Q6ZV80 131 aa5.03□□□□□ -1.6
CCDC170-202ENST00000537358 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
CCDC170-202ENST00000537358 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
CCDC170-202ENST00000537358 PSMB2P49721 201 aa5.02□□□□□ -1.61
CCDC170-202ENST00000537358 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
CCDC170-202ENST00000537358 RBM12B-AS1Q9P1G2 102 aa5.01□□□□□ -1.61
CCDC170-202ENST00000537358 A0A1B0GV72 72 aa5□□□□□ -1.61
CCDC170-202ENST00000537358 TRACP01848 142 aa5□□□□□ -1.61
CCDC170-202ENST00000537358 FXYD2P54710 66 aa5□□□□□ -1.61
CCDC170-202ENST00000537358 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
CCDC170-202ENST00000537358 CCKP06307 115 aa4.98□□□□□ -1.61
CCDC170-202ENST00000537358 HSD52Q0P140 79 aa4.98□□□□□ -1.61
CCDC170-202ENST00000537358 IGHV6-1A0A0B4J1U7 121 aa4.97□□□□□ -1.61
CCDC170-202ENST00000537358 UBE2V1Q13404 147 aa4.96□□□□□ -1.62
CCDC170-202ENST00000537358 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
CCDC170-202ENST00000537358 MTURNQ8N3F0 131 aa4.96□□□□□ -1.62
CCDC170-202ENST00000537358 VPS25Q9BRG1 176 aa4.96□□□□□ -1.62
CCDC170-202ENST00000537358 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
CCDC170-202ENST00000537358 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
CCDC170-202ENST00000537358 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
CCDC170-202ENST00000537358 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
CCDC170-202ENST00000537358 K7ERJ3 54 aa4.94□□□□□ -1.62
CCDC170-202ENST00000537358 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
CCDC170-202ENST00000537358 DSCR8Q96T75 97 aa4.94□□□□□ -1.62
CCDC170-202ENST00000537358 RBM3P98179 157 aaKnown RBP4.93□□□□□ -1.62
CCDC170-202ENST00000537358 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
CCDC170-202ENST00000537358 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
CCDC170-202ENST00000537358 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
CCDC170-202ENST00000537358 J3KT08 172 aa4.91□□□□□ -1.62
CCDC170-202ENST00000537358 HRES1P13985 223 aa4.91□□□□□ -1.62
CCDC170-202ENST00000537358 NDUFB1O75438 58 aa4.9□□□□□ -1.63
CCDC170-202ENST00000537358 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
CCDC170-202ENST00000537358 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
CCDC170-202ENST00000537358 C9JAW5 83 aa4.89□□□□□ -1.63
CCDC170-202ENST00000537358 MT2AP02795 61 aa4.88□□□□□ -1.63
CCDC170-202ENST00000537358 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
CCDC170-202ENST00000537358 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
CCDC170-202ENST00000537358 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
CCDC170-202ENST00000537358 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
CCDC170-202ENST00000537358 BAALC-AS2P0C853 105 aa4.87□□□□□ -1.63
CCDC170-202ENST00000537358 SPINK7P58062 85 aa4.85□□□□□ -1.63
CCDC170-202ENST00000537358 Q6ZQT0 140 aa4.85□□□□□ -1.63
CCDC170-202ENST00000537358 A0A1B0GW54 56 aa4.84□□□□□ -1.63
CCDC170-202ENST00000537358 JMJD7-PLA2G4BH0Y9G9 81 aa4.84□□□□□ -1.63
CCDC170-202ENST00000537358 MT1FP04733 61 aa4.84□□□□□ -1.63
CCDC170-202ENST00000537358 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
CCDC170-202ENST00000537358 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
CCDC170-202ENST00000537358 PDE6GP18545 87 aa4.82□□□□□ -1.64
CCDC170-202ENST00000537358 USH2AO75445 5202 aa4.82□□□□□ -1.64
CCDC170-202ENST00000537358 A8MWP4 228 aa4.81□□□□□ -1.64
CCDC170-202ENST00000537358 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
CCDC170-202ENST00000537358 C8orf17Q9NRJ1 99 aa4.81□□□□□ -1.64
CCDC170-202ENST00000537358 M0R143 59 aa4.8□□□□□ -1.64
CCDC170-202ENST00000537358 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
CCDC170-202ENST00000537358 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
CCDC170-202ENST00000537358 Q6ZVQ6 151 aa4.79□□□□□ -1.64
CCDC170-202ENST00000537358 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
CCDC170-202ENST00000537358 NREPQ16612 68 aa4.77□□□□□ -1.65
CCDC170-202ENST00000537358 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
CCDC170-202ENST00000537358 PRR15Q8IV56 129 aa4.75□□□□□ -1.65
CCDC170-202ENST00000537358 C14orf132Q9NPU4 83 aa4.75□□□□□ -1.65
CCDC170-202ENST00000537358 NDUFS5O43920 106 aa4.74□□□□□ -1.65
CCDC170-202ENST00000537358 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
CCDC170-202ENST00000537358 NAA38Q9BRA0 125 aaKnown RBP4.74□□□□□ -1.65
CCDC170-202ENST00000537358 MRPL34Q9BQ48 92 aaKnown RBP4.73□□□□□ -1.65
CCDC170-202ENST00000537358 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
CCDC170-202ENST00000537358 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
CCDC170-202ENST00000537358 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
CCDC170-202ENST00000537358 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
CCDC170-202ENST00000537358 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 K7EQZ3 153 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 BPY2O14599 106 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 IGKV2-30P06310 120 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 C7orf65Q6ZTY9 151 aa4.67□□□□□ -1.66
CCDC170-202ENST00000537358 TSTD3H0UI37 97 aa4.66□□□□□ -1.66
CCDC170-202ENST00000537358 H3BT86 120 aa4.66□□□□□ -1.66
CCDC170-202ENST00000537358 BATFQ16520 125 aa4.66□□□□□ -1.66
CCDC170-202ENST00000537358 SMIM6P0DI80 62 aa4.64□□□□□ -1.67
CCDC170-202ENST00000537358 PCP4P48539 62 aa4.62□□□□□ -1.67
CCDC170-202ENST00000537358 CASC2Q6XLA1 102 aa4.62□□□□□ -1.67
CCDC170-202ENST00000537358 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
CCDC170-202ENST00000537358 CXCL6P80162 114 aa4.6□□□□□ -1.67
CCDC170-202ENST00000537358 A0A1W2PPM0 123 aa4.59□□□□□ -1.67
CCDC170-202ENST00000537358 Q5W150 140 aa4.59□□□□□ -1.67
CCDC170-202ENST00000537358 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
CCDC170-202ENST00000537358 FAM236AA0A1B0GUQ0 79 aa4.57□□□□□ -1.68
CCDC170-202ENST00000537358 FAM236BA0A1B0GV22 79 aa4.57□□□□□ -1.68
CCDC170-202ENST00000537358 Q8N9L7 120 aa4.57□□□□□ -1.68
CCDC170-202ENST00000537358 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CCDC170-202ENST00000537358 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
CCDC170-202ENST00000537358 TAX1BP3O14907 124 aa4.55□□□□□ -1.68
CCDC170-202ENST00000537358 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
CCDC170-202ENST00000537358 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
CCDC170-202ENST00000537358 SPCS1Q9Y6A9 102 aa4.53□□□□□ -1.68
CCDC170-202ENST00000537358 S4R3F8 94 aa4.53□□□□□ -1.68
CCDC170-202ENST00000537358 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CCDC170-202ENST00000537358 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
CCDC170-202ENST00000537358 C1orf64Q8NEQ6 169 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms