RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
TRIM25-202ENST00000537230 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
TRIM25-202ENST00000537230 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
TRIM25-202ENST00000537230 NDUFS5O43920 106 aa7.72□□□□□ -1.17
TRIM25-202ENST00000537230 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
TRIM25-202ENST00000537230 WWC2-AS2Q96NR7 200 aa7.72□□□□□ -1.17
TRIM25-202ENST00000537230 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
TRIM25-202ENST00000537230 MOBPQ13875 183 aa7.71□□□□□ -1.18
TRIM25-202ENST00000537230 Q96NJ1 140 aa7.7□□□□□ -1.18
TRIM25-202ENST00000537230 PCOTHQ58A44 107 aa7.7□□□□□ -1.18
TRIM25-202ENST00000537230 ZNF861PO60384 105 aa7.69□□□□□ -1.18
TRIM25-202ENST00000537230 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
TRIM25-202ENST00000537230 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
TRIM25-202ENST00000537230 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
TRIM25-202ENST00000537230 A6NN06 94 aa7.68□□□□□ -1.18
TRIM25-202ENST00000537230 COA5Q86WW8 74 aa7.67□□□□□ -1.18
TRIM25-202ENST00000537230 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
TRIM25-202ENST00000537230 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
TRIM25-202ENST00000537230 LCA10Q71F78 164 aa7.66□□□□□ -1.18
TRIM25-202ENST00000537230 IGLV7-46A0A075B6I9 117 aa7.65□□□□□ -1.18
TRIM25-202ENST00000537230 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
TRIM25-202ENST00000537230 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
TRIM25-202ENST00000537230 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
TRIM25-202ENST00000537230 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 IGHV6-1A0A0B4J1U7 121 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 H3BS24 57 aa7.62□□□□□ -1.19
TRIM25-202ENST00000537230 A6NED7 52 aa7.6□□□□□ -1.19
TRIM25-202ENST00000537230 A0A087X002 238 aa7.59□□□□□ -1.19
TRIM25-202ENST00000537230 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
TRIM25-202ENST00000537230 TP53AIP1Q9HCN2 124 aa7.59□□□□□ -1.19
TRIM25-202ENST00000537230 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
TRIM25-202ENST00000537230 Q75L30 129 aa7.57□□□□□ -1.2
TRIM25-202ENST00000537230 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
TRIM25-202ENST00000537230 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
TRIM25-202ENST00000537230 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
TRIM25-202ENST00000537230 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
TRIM25-202ENST00000537230 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
TRIM25-202ENST00000537230 SACSQ9NZJ4 4579 aa7.54□□□□□ -1.2
TRIM25-202ENST00000537230 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
TRIM25-202ENST00000537230 CDK2AP2O75956 126 aa7.54□□□□□ -1.2
TRIM25-202ENST00000537230 HRES1P13985 223 aa7.52□□□□□ -1.21
TRIM25-202ENST00000537230 Q6ZSA8 131 aa7.5□□□□□ -1.21
TRIM25-202ENST00000537230 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
TRIM25-202ENST00000537230 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
TRIM25-202ENST00000537230 Q5W150 140 aa7.48□□□□□ -1.21
TRIM25-202ENST00000537230 SPINK7P58062 85 aa7.46□□□□□ -1.22
TRIM25-202ENST00000537230 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
TRIM25-202ENST00000537230 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
TRIM25-202ENST00000537230 LINC00313P59037 77 aa7.42□□□□□ -1.22
TRIM25-202ENST00000537230 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
TRIM25-202ENST00000537230 FAT1Q14517 4588 aa7.42□□□□□ -1.22
TRIM25-202ENST00000537230 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
TRIM25-202ENST00000537230 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
TRIM25-202ENST00000537230 KRTAP13-3Q3SY46 172 aa7.41□□□□□ -1.22
TRIM25-202ENST00000537230 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.23
TRIM25-202ENST00000537230 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
TRIM25-202ENST00000537230 KMT2CQ8NEZ4 4911 aaKnown RBP7.34□□□□□ -1.23
TRIM25-202ENST00000537230 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
TRIM25-202ENST00000537230 ACYP2P14621 99 aa7.33□□□□□ -1.24
TRIM25-202ENST00000537230 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
TRIM25-202ENST00000537230 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
TRIM25-202ENST00000537230 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
TRIM25-202ENST00000537230 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
TRIM25-202ENST00000537230 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
TRIM25-202ENST00000537230 RYR2Q92736 4967 aa7.27□□□□□ -1.25
TRIM25-202ENST00000537230 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
TRIM25-202ENST00000537230 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
TRIM25-202ENST00000537230 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
TRIM25-202ENST00000537230 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
TRIM25-202ENST00000537230 A0A1B0GU69 56 aa7.22□□□□□ -1.25
TRIM25-202ENST00000537230 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
TRIM25-202ENST00000537230 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
TRIM25-202ENST00000537230 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
TRIM25-202ENST00000537230 SPINK1P00995 79 aa7.18□□□□□ -1.26
TRIM25-202ENST00000537230 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
TRIM25-202ENST00000537230 KRTAP10-4P60372 401 aaPredicted RBP7.15□□□□□ -1.27
TRIM25-202ENST00000537230 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
TRIM25-202ENST00000537230 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
TRIM25-202ENST00000537230 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
TRIM25-202ENST00000537230 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
TRIM25-202ENST00000537230 UQCR11O14957 56 aa7.1□□□□□ -1.27
TRIM25-202ENST00000537230 RYR3Q15413 4870 aa7.09□□□□□ -1.28
TRIM25-202ENST00000537230 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
TRIM25-202ENST00000537230 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
TRIM25-202ENST00000537230 HSPG2P98160 4391 aa7.05□□□□□ -1.28
TRIM25-202ENST00000537230 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
TRIM25-202ENST00000537230 Q8N1X5 172 aa7.04□□□□□ -1.28
TRIM25-202ENST00000537230 TNXBP22105 4242 aa7.03□□□□□ -1.28
TRIM25-202ENST00000537230 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
TRIM25-202ENST00000537230 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
TRIM25-202ENST00000537230 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
TRIM25-202ENST00000537230 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
TRIM25-202ENST00000537230 A8MUU9 505 aa6.94□□□□□ -1.3
TRIM25-202ENST00000537230 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
TRIM25-202ENST00000537230 RYR1P21817 5038 aa6.93□□□□□ -1.3
TRIM25-202ENST00000537230 ROMO1P60602 79 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms