RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 A8MUN3 132 aa3.68□□□□□ -1.82
CHD4-206ENST00000536999 Q5VV11 94 aa3.68□□□□□ -1.82
CHD4-206ENST00000536999 LINC00472Q9H8W2 130 aa3.68□□□□□ -1.82
CHD4-206ENST00000536999 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
CHD4-206ENST00000536999 H3BS24 57 aa3.67□□□□□ -1.82
CHD4-206ENST00000536999 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
CHD4-206ENST00000536999 ST20-AS1Q8NBB2 130 aa3.67□□□□□ -1.82
CHD4-206ENST00000536999 Q6ZR54 194 aa3.66□□□□□ -1.82
CHD4-206ENST00000536999 COA5Q86WW8 74 aa3.66□□□□□ -1.82
CHD4-206ENST00000536999 LRCOL1A6NCL2 159 aa3.64□□□□□ -1.83
CHD4-206ENST00000536999 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
CHD4-206ENST00000536999 ACYP2P14621 99 aa3.64□□□□□ -1.83
CHD4-206ENST00000536999 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
CHD4-206ENST00000536999 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
CHD4-206ENST00000536999 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
CHD4-206ENST00000536999 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
CHD4-206ENST00000536999 HSPG2P98160 4391 aa3.63□□□□□ -1.83
CHD4-206ENST00000536999 C8orf87E5RJ46 101 aa3.62□□□□□ -1.83
CHD4-206ENST00000536999 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
CHD4-206ENST00000536999 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 A0A1B0GVX0 72 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 NUPR2A6NF83 97 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 PRR4Q16378 134 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 LCA10Q71F78 164 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
CHD4-206ENST00000536999 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
CHD4-206ENST00000536999 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
CHD4-206ENST00000536999 LINC00483Q53H64 154 aa3.6□□□□□ -1.83
CHD4-206ENST00000536999 Q8N1X5 172 aa3.6□□□□□ -1.83
CHD4-206ENST00000536999 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
CHD4-206ENST00000536999 RETNQ9HD89 108 aa3.6□□□□□ -1.83
CHD4-206ENST00000536999 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.83
CHD4-206ENST00000536999 PRLHP81277 87 aa3.59□□□□□ -1.83
CHD4-206ENST00000536999 PLAC8Q9NZF1 115 aa3.59□□□□□ -1.83
CHD4-206ENST00000536999 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.84
CHD4-206ENST00000536999 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 DNAH2Q9P225 4427 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 A0A096LNI7 61 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 A6NN06 94 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 KRTAP7-1Q8IUC3 87 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 UBE2DNLQ8IWF7 75 aa3.58□□□□□ -1.84
CHD4-206ENST00000536999 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
CHD4-206ENST00000536999 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
CHD4-206ENST00000536999 SPAG11AQ6PDA7 123 aa3.56□□□□□ -1.84
CHD4-206ENST00000536999 SSBP3-AS1Q7Z2R9 100 aa3.56□□□□□ -1.84
CHD4-206ENST00000536999 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
CHD4-206ENST00000536999 RBM12B-AS1Q9P1G2 102 aa3.56□□□□□ -1.84
CHD4-206ENST00000536999 IGHV6-1A0A0B4J1U7 121 aa3.55□□□□□ -1.84
CHD4-206ENST00000536999 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
CHD4-206ENST00000536999 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
CHD4-206ENST00000536999 A0A1B0GU69 56 aa3.54□□□□□ -1.84
CHD4-206ENST00000536999 UQCR11O14957 56 aa3.54□□□□□ -1.84
CHD4-206ENST00000536999 PCOTHQ58A44 107 aa3.54□□□□□ -1.84
CHD4-206ENST00000536999 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
CHD4-206ENST00000536999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.54□□□□□ -1.84
CHD4-206ENST00000536999 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
CHD4-206ENST00000536999 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
CHD4-206ENST00000536999 DNAH6Q9C0G6 4158 aa3.53□□□□□ -1.84
CHD4-206ENST00000536999 PLA2G1BP04054 148 aaKnown RBP3.53□□□□□ -1.84
CHD4-206ENST00000536999 HRES1P13985 223 aa3.53□□□□□ -1.84
CHD4-206ENST00000536999 ZNF861PO60384 105 aa3.52□□□□□ -1.85
CHD4-206ENST00000536999 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
CHD4-206ENST00000536999 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
CHD4-206ENST00000536999 PKD1P98161 4303 aa3.52□□□□□ -1.85
CHD4-206ENST00000536999 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
CHD4-206ENST00000536999 RTL8CO15255 209 aa3.51□□□□□ -1.85
CHD4-206ENST00000536999 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
CHD4-206ENST00000536999 Q96NJ1 140 aa3.51□□□□□ -1.85
CHD4-206ENST00000536999 IGLV9-49A0A0B4J1Y8 123 aa3.5□□□□□ -1.85
CHD4-206ENST00000536999 NBDYA0A0U1RRE5 68 aa3.5□□□□□ -1.85
CHD4-206ENST00000536999 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
CHD4-206ENST00000536999 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
CHD4-206ENST00000536999 LRP1BQ9NZR2 4599 aa3.5□□□□□ -1.85
CHD4-206ENST00000536999 LINC00313P59037 77 aa3.49□□□□□ -1.85
CHD4-206ENST00000536999 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
CHD4-206ENST00000536999 IGLV5-52A0A0A0MRZ9 124 aa3.48□□□□□ -1.85
CHD4-206ENST00000536999 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
CHD4-206ENST00000536999 APLNQ9ULZ1 77 aa3.48□□□□□ -1.85
CHD4-206ENST00000536999 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
CHD4-206ENST00000536999 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 SPINK7P58062 85 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
CHD4-206ENST00000536999 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
CHD4-206ENST00000536999 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
CHD4-206ENST00000536999 Q5VSD8 79 aa3.45□□□□□ -1.86
CHD4-206ENST00000536999 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
CHD4-206ENST00000536999 K7ERS5 55 aa3.43□□□□□ -1.86
CHD4-206ENST00000536999 PSORS1C2Q9UIG4 136 aa3.43□□□□□ -1.86
CHD4-206ENST00000536999 A0A087WTM6 91 aa3.42□□□□□ -1.86
CHD4-206ENST00000536999 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
CHD4-206ENST00000536999 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
CHD4-206ENST00000536999 Q5W150 140 aa3.42□□□□□ -1.86
CHD4-206ENST00000536999 Q6ZRN7 208 aaPredicted RBP3.41□□□□□ -1.86
CHD4-206ENST00000536999 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms