RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TYMSOSQ8TAI1 123 aa13.09□□□□□ -0.31
HMGA2-206ENST00000536545 ZCCHC13Q8WW36 166 aaKnown RBP13.06□□□□□ -0.32
HMGA2-206ENST00000536545 RYR3Q15413 4870 aa13.05□□□□□ -0.32
HMGA2-206ENST00000536545 NOTCH2NLQ7Z3S9 236 aa13.04□□□□□ -0.32
HMGA2-206ENST00000536545 LIMD2Q9BT23 127 aa13.04□□□□□ -0.32
HMGA2-206ENST00000536545 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
HMGA2-206ENST00000536545 FAM236DA0A1B0GTK5 79 aa13.02□□□□□ -0.32
HMGA2-206ENST00000536545 FAM236CP0DP71 79 aa13.02□□□□□ -0.32
HMGA2-206ENST00000536545 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.32
HMGA2-206ENST00000536545 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
HMGA2-206ENST00000536545 MRPL34Q9BQ48 92 aaKnown RBP12.99□□□□□ -0.33
HMGA2-206ENST00000536545 SPINK1P00995 79 aa12.98□□□□□ -0.33
HMGA2-206ENST00000536545 MP68P56378 58 aa12.98□□□□□ -0.33
HMGA2-206ENST00000536545 C4orf48Q5BLP8 95 aa12.98□□□□□ -0.33
HMGA2-206ENST00000536545 H0Y9P7 68 aa12.97□□□□□ -0.33
HMGA2-206ENST00000536545 C8orf87E5RJ46 101 aa12.96□□□□□ -0.34
HMGA2-206ENST00000536545 TP53AIP1Q9HCN2 124 aa12.96□□□□□ -0.34
HMGA2-206ENST00000536545 LINC00304Q8N9R0 145 aa12.94□□□□□ -0.34
HMGA2-206ENST00000536545 TRAV22A0A0B4J277 110 aa12.93□□□□□ -0.34
HMGA2-206ENST00000536545 H3BPC8 53 aa12.93□□□□□ -0.34
HMGA2-206ENST00000536545 RPS29P62273 56 aaKnown RBP12.92□□□□□ -0.34
HMGA2-206ENST00000536545 ATP5EP56381 51 aaPredicted RBP12.91□□□□□ -0.34
HMGA2-206ENST00000536545 RPS28P62857 69 aaKnown RBP12.9□□□□□ -0.34
HMGA2-206ENST00000536545 LINC00208Q96KT6 92 aa12.9□□□□□ -0.34
HMGA2-206ENST00000536545 HSPG2P98160 4391 aa12.9□□□□□ -0.35
HMGA2-206ENST00000536545 SPAG11AQ6PDA7 123 aa12.89□□□□□ -0.35
HMGA2-206ENST00000536545 NDUFS5O43920 106 aa12.88□□□□□ -0.35
HMGA2-206ENST00000536545 LINC00313P59037 77 aa12.85□□□□□ -0.35
HMGA2-206ENST00000536545 FAM229AH3BQW9 127 aa12.84□□□□□ -0.35
HMGA2-206ENST00000536545 C1orf64Q8NEQ6 169 aa12.83□□□□□ -0.36
HMGA2-206ENST00000536545 OXTP01178 125 aa12.82□□□□□ -0.36
HMGA2-206ENST00000536545 RYR1P21817 5038 aa12.81□□□□□ -0.36
HMGA2-206ENST00000536545 SERP1Q9Y6X1 66 aa12.81□□□□□ -0.36
HMGA2-206ENST00000536545 KRTAP16-1A8MUX0 517 aa12.79□□□□□ -0.36
HMGA2-206ENST00000536545 Q5VSD8 79 aa12.78□□□□□ -0.36
HMGA2-206ENST00000536545 Q8N9P0 234 aaPredicted RBP12.76□□□□□ -0.37
HMGA2-206ENST00000536545 KRTAP13-3Q3SY46 172 aa12.76□□□□□ -0.37
HMGA2-206ENST00000536545 Q5W150 140 aa12.71□□□□□ -0.37
HMGA2-206ENST00000536545 SPANXA2-OT1Q8N9U9 137 aa12.67□□□□□ -0.38
HMGA2-206ENST00000536545 CYP4F30PQ9H0H9 118 aa12.67□□□□□ -0.38
HMGA2-206ENST00000536545 KRTAP17-1Q9BYP8 105 aa12.66□□□□□ -0.38
HMGA2-206ENST00000536545 LOC101927531A0A1B0GV80 90 aa12.63□□□□□ -0.39
HMGA2-206ENST00000536545 TNXBP22105 4242 aa12.63□□□□□ -0.39
HMGA2-206ENST00000536545 PRR4Q16378 134 aa12.62□□□□□ -0.39
HMGA2-206ENST00000536545 PCOTHQ58A44 107 aa12.61□□□□□ -0.39
HMGA2-206ENST00000536545 KRTAP10-8P60410 259 aa12.6□□□□□ -0.39
HMGA2-206ENST00000536545 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
HMGA2-206ENST00000536545 LRP1Q07954 4544 aaKnown RBP12.6□□□□□ -0.39
HMGA2-206ENST00000536545 FLG2Q5D862 2391 aaPredicted RBP12.58□□□□□ -0.4
HMGA2-206ENST00000536545 Q8N1X5 172 aa12.56□□□□□ -0.4
HMGA2-206ENST00000536545 FAT3Q8TDW7 4589 aa12.55□□□□□ -0.4
HMGA2-206ENST00000536545 EPPK1P58107 5090 aaKnown RBP12.54□□□□□ -0.4
HMGA2-206ENST00000536545 IGLV7-46A0A075B6I9 117 aa12.54□□□□□ -0.4
HMGA2-206ENST00000536545 RETNLBQ9BQ08 111 aa12.53□□□□□ -0.4
HMGA2-206ENST00000536545 SMIM26A0A096LP01 95 aa12.49□□□□□ -0.41
HMGA2-206ENST00000536545 IGKV2-30P06310 120 aa12.48□□□□□ -0.41
HMGA2-206ENST00000536545 C9orf92A6NGG3 77 aa12.44□□□□□ -0.42
HMGA2-206ENST00000536545 FP248Q71RG6 208 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-206ENST00000536545 C20orf166-AS1Q96NR2 134 aa12.42□□□□□ -0.42
HMGA2-206ENST00000536545 A8MUU9 505 aa12.41□□□□□ -0.42
HMGA2-206ENST00000536545 MT1HL1P0DM35 61 aa12.38□□□□□ -0.43
HMGA2-206ENST00000536545 MYCBP2O75592 4640 aa12.37□□□□□ -0.43
HMGA2-206ENST00000536545 HRES1P13985 223 aa12.35□□□□□ -0.43
HMGA2-206ENST00000536545 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
HMGA2-206ENST00000536545 COA5Q86WW8 74 aa12.33□□□□□ -0.44
HMGA2-206ENST00000536545 C4orf26Q17RF5 130 aa12.29□□□□□ -0.44
HMGA2-206ENST00000536545 DMBT1Q9UGM3 2413 aaPredicted RBP12.27□□□□□ -0.45
HMGA2-206ENST00000536545 C7orf65Q6ZTY9 151 aa12.25□□□□□ -0.45
HMGA2-206ENST00000536545 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
HMGA2-206ENST00000536545 Q75L30 129 aa12.24□□□□□ -0.45
HMGA2-206ENST00000536545 DMAC1Q96GE9 116 aa12.24□□□□□ -0.45
HMGA2-206ENST00000536545 Q1T7F1 81 aa12.19□□□□□ -0.46
HMGA2-206ENST00000536545 KRTAP4-5Q9BYR2 181 aa12.19□□□□□ -0.46
HMGA2-206ENST00000536545 ACYP2P14621 99 aa12.15□□□□□ -0.46
HMGA2-206ENST00000536545 XP32Q5T750 250 aa12.07□□□□□ -0.48
HMGA2-206ENST00000536545 V9GYY9 64 aa12.07□□□□□ -0.48
HMGA2-206ENST00000536545 RPL37P61927 97 aaKnown RBP12.06□□□□□ -0.48
HMGA2-206ENST00000536545 SPINK7P58062 85 aa12.03□□□□□ -0.48
HMGA2-206ENST00000536545 BIRC6Q9NR09 4857 aa12□□□□□ -0.49
HMGA2-206ENST00000536545 ATP11AUNQ6ZP68 121 aa11.99□□□□□ -0.49
HMGA2-206ENST00000536545 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
HMGA2-206ENST00000536545 CHKB-CPT1BH3BT56 60 aa11.97□□□□□ -0.49
HMGA2-206ENST00000536545 HERC2O95714 4834 aa11.97□□□□□ -0.49
HMGA2-206ENST00000536545 A8MUN3 132 aa11.97□□□□□ -0.49
HMGA2-206ENST00000536545 PSPHP1O15172 72 aa11.96□□□□□ -0.49
HMGA2-206ENST00000536545 LINC01558Q9Y6Z2 57 aa11.92□□□□□ -0.5
HMGA2-206ENST00000536545 TPRXLQ17RH7 258 aa11.92□□□□□ -0.5
HMGA2-206ENST00000536545 PRR15LQ9BU68 103 aa11.89□□□□□ -0.51
HMGA2-206ENST00000536545 Q5VV11 94 aa11.88□□□□□ -0.51
HMGA2-206ENST00000536545 KRTAP3-1Q9BYR8 98 aa11.87□□□□□ -0.51
HMGA2-206ENST00000536545 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
HMGA2-206ENST00000536545 J3QL48 77 aa11.75□□□□□ -0.53
HMGA2-206ENST00000536545 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
HMGA2-206ENST00000536545 LRP2P98164 4655 aa11.7□□□□□ -0.54
HMGA2-206ENST00000536545 LPAP08519 4548 aa11.67□□□□□ -0.54
HMGA2-206ENST00000536545 PRO0628Q9UI54 55 aa11.64□□□□□ -0.55
HMGA2-206ENST00000536545 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
HMGA2-206ENST00000536545 A0A1B0GU69 56 aa11.6□□□□□ -0.55
HMGA2-206ENST00000536545 A6NED7 52 aa11.56□□□□□ -0.56
HMGA2-206ENST00000536545 A8MU10 97 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms