RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 V9GYY9 64 aa7.78□□□□□ -1.16
LGR5-202ENST00000536515 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
LGR5-202ENST00000536515 CD164Q04900 197 aa7.78□□□□□ -1.16
LGR5-202ENST00000536515 COA5Q86WW8 74 aa7.76□□□□□ -1.17
LGR5-202ENST00000536515 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
LGR5-202ENST00000536515 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
LGR5-202ENST00000536515 SPINK6Q6UWN8 80 aa7.75□□□□□ -1.17
LGR5-202ENST00000536515 Q5VV11 94 aa7.74□□□□□ -1.17
LGR5-202ENST00000536515 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
LGR5-202ENST00000536515 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
LGR5-202ENST00000536515 C1orf195Q5TG92 126 aa7.73□□□□□ -1.17
LGR5-202ENST00000536515 CIRBP-AS1Q8TBR5 109 aa7.72□□□□□ -1.17
LGR5-202ENST00000536515 DNAH6Q9C0G6 4158 aa7.72□□□□□ -1.17
LGR5-202ENST00000536515 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
LGR5-202ENST00000536515 PRR15LQ9BU68 103 aa7.71□□□□□ -1.17
LGR5-202ENST00000536515 A8MU10 97 aa7.68□□□□□ -1.18
LGR5-202ENST00000536515 CHKB-CPT1BH3BT56 60 aa7.68□□□□□ -1.18
LGR5-202ENST00000536515 Q5W150 140 aa7.66□□□□□ -1.18
LGR5-202ENST00000536515 HRES1P13985 223 aa7.64□□□□□ -1.19
LGR5-202ENST00000536515 DNAH11Q96DT5 4516 aa7.63□□□□□ -1.19
LGR5-202ENST00000536515 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
LGR5-202ENST00000536515 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
LGR5-202ENST00000536515 LOC101927531A0A1B0GV80 90 aa7.62□□□□□ -1.19
LGR5-202ENST00000536515 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
LGR5-202ENST00000536515 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
LGR5-202ENST00000536515 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
LGR5-202ENST00000536515 DNAH5Q8TE73 4624 aa7.61□□□□□ -1.19
LGR5-202ENST00000536515 Q75L30 129 aa7.6□□□□□ -1.19
LGR5-202ENST00000536515 A6NED7 52 aa7.58□□□□□ -1.2
LGR5-202ENST00000536515 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
LGR5-202ENST00000536515 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
LGR5-202ENST00000536515 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
LGR5-202ENST00000536515 KRTAP13-2Q52LG2 175 aa7.55□□□□□ -1.2
LGR5-202ENST00000536515 LCA10Q71F78 164 aa7.55□□□□□ -1.2
LGR5-202ENST00000536515 LINC00313P59037 77 aa7.55□□□□□ -1.2
LGR5-202ENST00000536515 KMT2CQ8NEZ4 4911 aaKnown RBP7.55□□□□□ -1.2
LGR5-202ENST00000536515 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
LGR5-202ENST00000536515 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
LGR5-202ENST00000536515 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
LGR5-202ENST00000536515 PRR26Q8N8Z3 221 aa7.54□□□□□ -1.2
LGR5-202ENST00000536515 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
LGR5-202ENST00000536515 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
LGR5-202ENST00000536515 RYR2Q92736 4967 aa7.52□□□□□ -1.21
LGR5-202ENST00000536515 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
LGR5-202ENST00000536515 Q6ZSA8 131 aa7.49□□□□□ -1.21
LGR5-202ENST00000536515 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
LGR5-202ENST00000536515 ACYP2P14621 99 aa7.48□□□□□ -1.21
LGR5-202ENST00000536515 PKD1P98161 4303 aa7.48□□□□□ -1.21
LGR5-202ENST00000536515 SPINK7P58062 85 aa7.47□□□□□ -1.21
LGR5-202ENST00000536515 CDC42SE1Q9NRR8 79 aa7.47□□□□□ -1.21
LGR5-202ENST00000536515 A0A1B0GVY2 172 aa7.46□□□□□ -1.22
LGR5-202ENST00000536515 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
LGR5-202ENST00000536515 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
LGR5-202ENST00000536515 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
LGR5-202ENST00000536515 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
LGR5-202ENST00000536515 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
LGR5-202ENST00000536515 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
LGR5-202ENST00000536515 RYR3Q15413 4870 aa7.4□□□□□ -1.22
LGR5-202ENST00000536515 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
LGR5-202ENST00000536515 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
LGR5-202ENST00000536515 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
LGR5-202ENST00000536515 A6NN06 94 aa7.37□□□□□ -1.23
LGR5-202ENST00000536515 TYMSOSQ8TAI1 123 aa7.37□□□□□ -1.23
LGR5-202ENST00000536515 SEC61GP60059 68 aa7.36□□□□□ -1.23
LGR5-202ENST00000536515 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
LGR5-202ENST00000536515 SPINK1P00995 79 aa7.32□□□□□ -1.24
LGR5-202ENST00000536515 A0A1B0GU69 56 aa7.31□□□□□ -1.24
LGR5-202ENST00000536515 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
LGR5-202ENST00000536515 PKHD1P08F94 4074 aa7.29□□□□□ -1.24
LGR5-202ENST00000536515 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
LGR5-202ENST00000536515 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
LGR5-202ENST00000536515 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
LGR5-202ENST00000536515 Q8N1X5 172 aa7.22□□□□□ -1.25
LGR5-202ENST00000536515 RBM12B-AS1Q9P1G2 102 aa7.19□□□□□ -1.26
LGR5-202ENST00000536515 SPATA8Q6RVD6 105 aa7.18□□□□□ -1.26
LGR5-202ENST00000536515 RPS29P62273 56 aaKnown RBP7.18□□□□□ -1.26
LGR5-202ENST00000536515 UQCR11O14957 56 aa7.17□□□□□ -1.26
LGR5-202ENST00000536515 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
LGR5-202ENST00000536515 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
LGR5-202ENST00000536515 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
LGR5-202ENST00000536515 FAT1Q14517 4588 aa7.15□□□□□ -1.26
LGR5-202ENST00000536515 EPPK1P58107 5090 aaKnown RBP7.14□□□□□ -1.27
LGR5-202ENST00000536515 A8MUU9 505 aa7.09□□□□□ -1.27
LGR5-202ENST00000536515 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
LGR5-202ENST00000536515 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
LGR5-202ENST00000536515 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
LGR5-202ENST00000536515 KRTAP10-4P60372 401 aaPredicted RBP7.07□□□□□ -1.28
LGR5-202ENST00000536515 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
LGR5-202ENST00000536515 HSPG2P98160 4391 aa7.06□□□□□ -1.28
LGR5-202ENST00000536515 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
LGR5-202ENST00000536515 Q5VSD8 79 aa7.03□□□□□ -1.28
LGR5-202ENST00000536515 RYR1P21817 5038 aa7.02□□□□□ -1.29
LGR5-202ENST00000536515 KRTAP17-1Q9BYP8 105 aa7.02□□□□□ -1.29
LGR5-202ENST00000536515 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
LGR5-202ENST00000536515 BIRC6Q9NR09 4857 aa6.99□□□□□ -1.29
LGR5-202ENST00000536515 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
LGR5-202ENST00000536515 H0YAA0 97 aa6.94□□□□□ -1.3
LGR5-202ENST00000536515 A0A1B0GU33 70 aa6.91□□□□□ -1.3
LGR5-202ENST00000536515 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
LGR5-202ENST00000536515 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms