RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
RTN3P1-201ENST00000536295 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
RTN3P1-201ENST00000536295 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
RTN3P1-201ENST00000536295 HRES1P13985 223 aa7.17□□□□□ -1.26
RTN3P1-201ENST00000536295 M0R143 59 aa7.16□□□□□ -1.26
RTN3P1-201ENST00000536295 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
RTN3P1-201ENST00000536295 Q6ZQT0 140 aa7.16□□□□□ -1.26
RTN3P1-201ENST00000536295 J3KT08 172 aa7.15□□□□□ -1.26
RTN3P1-201ENST00000536295 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
RTN3P1-201ENST00000536295 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
RTN3P1-201ENST00000536295 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
RTN3P1-201ENST00000536295 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
RTN3P1-201ENST00000536295 USH2AO75445 5202 aa7.11□□□□□ -1.27
RTN3P1-201ENST00000536295 NDUFB1O75438 58 aa7.11□□□□□ -1.27
RTN3P1-201ENST00000536295 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
RTN3P1-201ENST00000536295 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
RTN3P1-201ENST00000536295 LCE2BO14633 110 aa7.08□□□□□ -1.28
RTN3P1-201ENST00000536295 MT2AP02795 61 aa7.08□□□□□ -1.28
RTN3P1-201ENST00000536295 A8MWP4 228 aa7.07□□□□□ -1.28
RTN3P1-201ENST00000536295 SPINK7P58062 85 aa7.07□□□□□ -1.28
RTN3P1-201ENST00000536295 LYRM7Q5U5X0 104 aa7.07□□□□□ -1.28
RTN3P1-201ENST00000536295 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
RTN3P1-201ENST00000536295 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
RTN3P1-201ENST00000536295 Q8N9P0 234 aaPredicted RBP7.06□□□□□ -1.28
RTN3P1-201ENST00000536295 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 A0A1B0GW54 56 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 SMIM6P0DI80 62 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 PDE6GP18545 87 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 BATFQ16520 125 aa7.05□□□□□ -1.28
RTN3P1-201ENST00000536295 MT1FP04733 61 aa7.03□□□□□ -1.28
RTN3P1-201ENST00000536295 NREPQ16612 68 aa7.02□□□□□ -1.29
RTN3P1-201ENST00000536295 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
RTN3P1-201ENST00000536295 Q6ZVQ6 151 aa7.01□□□□□ -1.29
RTN3P1-201ENST00000536295 TSTD3H0UI37 97 aa7□□□□□ -1.29
RTN3P1-201ENST00000536295 WFDC13Q8IUB5 93 aa6.99□□□□□ -1.29
RTN3P1-201ENST00000536295 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
RTN3P1-201ENST00000536295 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
RTN3P1-201ENST00000536295 MRPL34Q9BQ48 92 aaKnown RBP6.95□□□□□ -1.3
RTN3P1-201ENST00000536295 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
RTN3P1-201ENST00000536295 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
RTN3P1-201ENST00000536295 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
RTN3P1-201ENST00000536295 H3BT86 120 aa6.93□□□□□ -1.3
RTN3P1-201ENST00000536295 K7EQZ3 153 aa6.93□□□□□ -1.3
RTN3P1-201ENST00000536295 NDUFS5O43920 106 aa6.93□□□□□ -1.3
RTN3P1-201ENST00000536295 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
RTN3P1-201ENST00000536295 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
RTN3P1-201ENST00000536295 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
RTN3P1-201ENST00000536295 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
RTN3P1-201ENST00000536295 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
RTN3P1-201ENST00000536295 BPY2O14599 106 aa6.88□□□□□ -1.31
RTN3P1-201ENST00000536295 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
RTN3P1-201ENST00000536295 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
RTN3P1-201ENST00000536295 IGKV2D-30A0A075B6S6 120 aa6.84□□□□□ -1.31
RTN3P1-201ENST00000536295 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
RTN3P1-201ENST00000536295 IGKV2-30P06310 120 aa6.84□□□□□ -1.31
RTN3P1-201ENST00000536295 Q8N9L7 120 aa6.84□□□□□ -1.31
RTN3P1-201ENST00000536295 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
RTN3P1-201ENST00000536295 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
RTN3P1-201ENST00000536295 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
RTN3P1-201ENST00000536295 Q5W150 140 aa6.82□□□□□ -1.32
RTN3P1-201ENST00000536295 CASC2Q6XLA1 102 aa6.8□□□□□ -1.32
RTN3P1-201ENST00000536295 C7orf65Q6ZTY9 151 aa6.8□□□□□ -1.32
RTN3P1-201ENST00000536295 HCG22E2RYF7 251 aa6.78□□□□□ -1.32
RTN3P1-201ENST00000536295 LINC00846Q9NV44 126 aa6.73□□□□□ -1.33
RTN3P1-201ENST00000536295 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
RTN3P1-201ENST00000536295 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
RTN3P1-201ENST00000536295 CXCL6P80162 114 aa6.71□□□□□ -1.34
RTN3P1-201ENST00000536295 COL5A1-AS1Q5SY13 56 aa6.71□□□□□ -1.34
RTN3P1-201ENST00000536295 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
RTN3P1-201ENST00000536295 PRO0461Q9UI25 63 aa6.7□□□□□ -1.34
RTN3P1-201ENST00000536295 K7EP34 96 aa6.68□□□□□ -1.34
RTN3P1-201ENST00000536295 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
RTN3P1-201ENST00000536295 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
RTN3P1-201ENST00000536295 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
RTN3P1-201ENST00000536295 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
RTN3P1-201ENST00000536295 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
RTN3P1-201ENST00000536295 C1orf64Q8NEQ6 169 aa6.58□□□□□ -1.36
RTN3P1-201ENST00000536295 S4R3F8 94 aa6.58□□□□□ -1.36
RTN3P1-201ENST00000536295 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
RTN3P1-201ENST00000536295 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
RTN3P1-201ENST00000536295 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
RTN3P1-201ENST00000536295 ETDBQ3ZM63 59 aa6.55□□□□□ -1.36
RTN3P1-201ENST00000536295 F8W1H4 67 aa6.54□□□□□ -1.36
RTN3P1-201ENST00000536295 LCA10Q71F78 164 aa6.53□□□□□ -1.36
RTN3P1-201ENST00000536295 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
RTN3P1-201ENST00000536295 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
RTN3P1-201ENST00000536295 CYP4F30PQ9H0H9 118 aa6.45□□□□□ -1.38
RTN3P1-201ENST00000536295 Q5VV11 94 aa6.43□□□□□ -1.38
RTN3P1-201ENST00000536295 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
RTN3P1-201ENST00000536295 MT1BP07438 61 aa6.42□□□□□ -1.38
RTN3P1-201ENST00000536295 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
RTN3P1-201ENST00000536295 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
RTN3P1-201ENST00000536295 A0A087WVE0 104 aa6.4□□□□□ -1.38
RTN3P1-201ENST00000536295 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.38
RTN3P1-201ENST00000536295 A6NN06 94 aa6.4□□□□□ -1.38
RTN3P1-201ENST00000536295 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
RTN3P1-201ENST00000536295 ACYP1P07311 99 aa6.38□□□□□ -1.39
RTN3P1-201ENST00000536295 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
RTN3P1-201ENST00000536295 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms