RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 NBEAL2Q6ZNJ1 2754 aa4.03□□□□□ -1.76
CPSF7-215ENST00000536145 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
CPSF7-215ENST00000536145 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
CPSF7-215ENST00000536145 COL6A5A8TX70 2615 aa4.01□□□□□ -1.77
CPSF7-215ENST00000536145 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
CPSF7-215ENST00000536145 A0A1B0GU69 56 aa4□□□□□ -1.77
CPSF7-215ENST00000536145 FAM229AH3BQW9 127 aa4□□□□□ -1.77
CPSF7-215ENST00000536145 ZNF861PO60384 105 aa4□□□□□ -1.77
CPSF7-215ENST00000536145 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
CPSF7-215ENST00000536145 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
CPSF7-215ENST00000536145 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
CPSF7-215ENST00000536145 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
CPSF7-215ENST00000536145 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
CPSF7-215ENST00000536145 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
CPSF7-215ENST00000536145 DNHD1Q96M86 4753 aa3.98□□□□□ -1.77
CPSF7-215ENST00000536145 UBE2DNLQ8IWF7 75 aa3.97□□□□□ -1.77
CPSF7-215ENST00000536145 STAB1Q9NY15 2570 aa3.96□□□□□ -1.78
CPSF7-215ENST00000536145 UQCR11O14957 56 aa3.96□□□□□ -1.78
CPSF7-215ENST00000536145 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.78
CPSF7-215ENST00000536145 HUWE1Q7Z6Z7 4374 aaKnown RBP3.96□□□□□ -1.78
CPSF7-215ENST00000536145 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
CPSF7-215ENST00000536145 VWFP04275 2813 aa3.95□□□□□ -1.78
CPSF7-215ENST00000536145 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
CPSF7-215ENST00000536145 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
CPSF7-215ENST00000536145 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
CPSF7-215ENST00000536145 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
CPSF7-215ENST00000536145 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
CPSF7-215ENST00000536145 A0A087WTM6 91 aa3.94□□□□□ -1.78
CPSF7-215ENST00000536145 ANK2Q01484 3957 aa3.94□□□□□ -1.78
CPSF7-215ENST00000536145 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
CPSF7-215ENST00000536145 H3BS24 57 aa3.93□□□□□ -1.78
CPSF7-215ENST00000536145 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
CPSF7-215ENST00000536145 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
CPSF7-215ENST00000536145 RETNLBQ9BQ08 111 aa3.92□□□□□ -1.78
CPSF7-215ENST00000536145 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
CPSF7-215ENST00000536145 CIRBP-AS1Q8TBR5 109 aa3.91□□□□□ -1.78
CPSF7-215ENST00000536145 DNAH10Q8IVF4 4471 aa3.9□□□□□ -1.79
CPSF7-215ENST00000536145 LCE2CQ5TA81 110 aa3.9□□□□□ -1.79
CPSF7-215ENST00000536145 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
CPSF7-215ENST00000536145 DNAH8Q96JB1 4490 aa3.89□□□□□ -1.79
CPSF7-215ENST00000536145 KRTAP13-2Q52LG2 175 aa3.88□□□□□ -1.79
CPSF7-215ENST00000536145 MGAM2Q2M2H8 2515 aa3.88□□□□□ -1.79
CPSF7-215ENST00000536145 A8MUU9 505 aa3.87□□□□□ -1.79
CPSF7-215ENST00000536145 DNAH17Q9UFH2 4485 aa3.87□□□□□ -1.79
CPSF7-215ENST00000536145 NUPR2A6NF83 97 aa3.85□□□□□ -1.79
CPSF7-215ENST00000536145 LY6G6CO95867 125 aa3.85□□□□□ -1.79
CPSF7-215ENST00000536145 PKD1L1Q8TDX9 2849 aa3.85□□□□□ -1.79
CPSF7-215ENST00000536145 H0YAA0 97 aa3.84□□□□□ -1.79
CPSF7-215ENST00000536145 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
CPSF7-215ENST00000536145 Q6ZSA8 131 aa3.84□□□□□ -1.79
CPSF7-215ENST00000536145 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
CPSF7-215ENST00000536145 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
CPSF7-215ENST00000536145 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
CPSF7-215ENST00000536145 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
CPSF7-215ENST00000536145 VPS13DQ5THJ4 4388 aa3.79□□□□□ -1.8
CPSF7-215ENST00000536145 C1orf134Q5TEV5 83 aa3.79□□□□□ -1.8
CPSF7-215ENST00000536145 LORP23490 312 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-215ENST00000536145 H1FX-AS1Q4G0G2 97 aa3.78□□□□□ -1.8
CPSF7-215ENST00000536145 Q8N1X5 172 aa3.78□□□□□ -1.8
CPSF7-215ENST00000536145 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
CPSF7-215ENST00000536145 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
CPSF7-215ENST00000536145 ROMO1P60602 79 aa3.77□□□□□ -1.81
CPSF7-215ENST00000536145 A0A1B0GU33 70 aa3.76□□□□□ -1.81
CPSF7-215ENST00000536145 SPINK1P00995 79 aa3.76□□□□□ -1.81
CPSF7-215ENST00000536145 NBEAL1Q6ZS30 2694 aa3.76□□□□□ -1.81
CPSF7-215ENST00000536145 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
CPSF7-215ENST00000536145 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
CPSF7-215ENST00000536145 KRTAP10-2P60368 255 aa3.72□□□□□ -1.81
CPSF7-215ENST00000536145 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
CPSF7-215ENST00000536145 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
CPSF7-215ENST00000536145 SACSQ9NZJ4 4579 aa3.72□□□□□ -1.81
CPSF7-215ENST00000536145 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.81
CPSF7-215ENST00000536145 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
CPSF7-215ENST00000536145 P0C880 135 aa3.7□□□□□ -1.82
CPSF7-215ENST00000536145 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
CPSF7-215ENST00000536145 COL7A1Q02388 2944 aa3.7□□□□□ -1.82
CPSF7-215ENST00000536145 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
CPSF7-215ENST00000536145 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
CPSF7-215ENST00000536145 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
CPSF7-215ENST00000536145 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
CPSF7-215ENST00000536145 COX6B2Q6YFQ2 88 aa3.68□□□□□ -1.82
CPSF7-215ENST00000536145 LYSTQ99698 3801 aa3.68□□□□□ -1.82
CPSF7-215ENST00000536145 STARD9Q9P2P6 4700 aa3.67□□□□□ -1.82
CPSF7-215ENST00000536145 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
CPSF7-215ENST00000536145 STAB2Q8WWQ8 2551 aa3.64□□□□□ -1.83
CPSF7-215ENST00000536145 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
CPSF7-215ENST00000536145 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
CPSF7-215ENST00000536145 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
CPSF7-215ENST00000536145 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
CPSF7-215ENST00000536145 CRIPTQ9P021 101 aa3.63□□□□□ -1.83
CPSF7-215ENST00000536145 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
CPSF7-215ENST00000536145 K7ERS5 55 aa3.62□□□□□ -1.83
CPSF7-215ENST00000536145 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
CPSF7-215ENST00000536145 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
CPSF7-215ENST00000536145 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
CPSF7-215ENST00000536145 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
CPSF7-215ENST00000536145 TGP01266 2768 aa3.6□□□□□ -1.83
CPSF7-215ENST00000536145 HECTD4Q9Y4D8 3996 aa3.6□□□□□ -1.83
CPSF7-215ENST00000536145 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
CPSF7-215ENST00000536145 C9orf92A6NGG3 77 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms