RNA–Protein interactions for RNA: ENST00000535896.6

SYNE1-233, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-233ENST00000535896 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
SYNE1-233ENST00000535896 H0Y9P7 68 aa3.91□□□□□ -1.78
SYNE1-233ENST00000535896 C9orf163Q8N9P6 203 aa3.91□□□□□ -1.78
SYNE1-233ENST00000535896 LIMD2Q9BT23 127 aa3.91□□□□□ -1.78
SYNE1-233ENST00000535896 LY6G6CO95867 125 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 CD164Q04900 197 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 ASB16-AS1Q495Z4 193 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 LINC00208Q96KT6 92 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.78
SYNE1-233ENST00000535896 DNAH2Q9P225 4427 aa3.9□□□□□ -1.78
SYNE1-233ENST00000535896 RYR3Q15413 4870 aa3.9□□□□□ -1.79
SYNE1-233ENST00000535896 DNAH10Q8IVF4 4471 aa3.9□□□□□ -1.79
SYNE1-233ENST00000535896 IGKV2-24A0A0C4DH68 120 aa3.89□□□□□ -1.79
SYNE1-233ENST00000535896 HYDINQ4G0P3 5121 aa3.89□□□□□ -1.79
SYNE1-233ENST00000535896 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
SYNE1-233ENST00000535896 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
SYNE1-233ENST00000535896 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
SYNE1-233ENST00000535896 IGLV7-46A0A075B6I9 117 aa3.88□□□□□ -1.79
SYNE1-233ENST00000535896 Q6ZR54 194 aa3.88□□□□□ -1.79
SYNE1-233ENST00000535896 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
SYNE1-233ENST00000535896 LRCOL1A6NCL2 159 aa3.87□□□□□ -1.79
SYNE1-233ENST00000535896 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
SYNE1-233ENST00000535896 FRAS1Q86XX4 4008 aa3.86□□□□□ -1.79
SYNE1-233ENST00000535896 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
SYNE1-233ENST00000535896 FAT2Q9NYQ8 4349 aa3.85□□□□□ -1.79
SYNE1-233ENST00000535896 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
SYNE1-233ENST00000535896 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
SYNE1-233ENST00000535896 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-233ENST00000535896 SPACA4Q8TDM5 124 aa3.85□□□□□ -1.79
SYNE1-233ENST00000535896 Q96NJ1 140 aa3.85□□□□□ -1.79
SYNE1-233ENST00000535896 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
SYNE1-233ENST00000535896 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-233ENST00000535896 Q75L30 129 aa3.84□□□□□ -1.79
SYNE1-233ENST00000535896 A0A0G2JQZ4 141 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 CHTF8P0CG12 524 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 Q5VV11 94 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
SYNE1-233ENST00000535896 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
SYNE1-233ENST00000535896 PSPHP1O15172 72 aa3.82□□□□□ -1.8
SYNE1-233ENST00000535896 C1orf134Q5TEV5 83 aa3.82□□□□□ -1.8
SYNE1-233ENST00000535896 COA5Q86WW8 74 aa3.82□□□□□ -1.8
SYNE1-233ENST00000535896 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
SYNE1-233ENST00000535896 A8MUN3 132 aa3.81□□□□□ -1.8
SYNE1-233ENST00000535896 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
SYNE1-233ENST00000535896 PRR4Q16378 134 aa3.81□□□□□ -1.8
SYNE1-233ENST00000535896 MRPL34Q9BQ48 92 aaKnown RBP3.81□□□□□ -1.8
SYNE1-233ENST00000535896 IGLV5-52A0A0A0MRZ9 124 aa3.8□□□□□ -1.8
SYNE1-233ENST00000535896 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
SYNE1-233ENST00000535896 RTL8CO15255 209 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 ZNF861PO60384 105 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 ATP11AUNQ6ZP68 121 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 PKD1P98161 4303 aa3.79□□□□□ -1.8
SYNE1-233ENST00000535896 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
SYNE1-233ENST00000535896 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
SYNE1-233ENST00000535896 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
SYNE1-233ENST00000535896 PKHD1P08F94 4074 aa3.78□□□□□ -1.8
SYNE1-233ENST00000535896 DNAH5Q8TE73 4624 aa3.78□□□□□ -1.81
SYNE1-233ENST00000535896 A0A087WTM6 91 aa3.77□□□□□ -1.81
SYNE1-233ENST00000535896 CHKB-CPT1BH3BT56 60 aa3.77□□□□□ -1.81
SYNE1-233ENST00000535896 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SYNE1-233ENST00000535896 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
SYNE1-233ENST00000535896 PANO1I0J062 215 aa3.76□□□□□ -1.81
SYNE1-233ENST00000535896 IGHV6-1A0A0B4J1U7 121 aa3.76□□□□□ -1.81
SYNE1-233ENST00000535896 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
SYNE1-233ENST00000535896 PSORS1C2Q9UIG4 136 aa3.76□□□□□ -1.81
SYNE1-233ENST00000535896 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
SYNE1-233ENST00000535896 A6NED7 52 aa3.75□□□□□ -1.81
SYNE1-233ENST00000535896 NDUFS5O43920 106 aa3.75□□□□□ -1.81
SYNE1-233ENST00000535896 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SYNE1-233ENST00000535896 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
SYNE1-233ENST00000535896 LRP1BQ9NZR2 4599 aa3.74□□□□□ -1.81
SYNE1-233ENST00000535896 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
SYNE1-233ENST00000535896 PCOTHQ58A44 107 aa3.74□□□□□ -1.81
SYNE1-233ENST00000535896 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SYNE1-233ENST00000535896 SRRM2Q9UQ35 2752 aaKnown RBP3.73□□□□□ -1.81
SYNE1-233ENST00000535896 DNAH8Q96JB1 4490 aa3.73□□□□□ -1.81
SYNE1-233ENST00000535896 HRES1P13985 223 aa3.73□□□□□ -1.81
SYNE1-233ENST00000535896 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
SYNE1-233ENST00000535896 IGLV7-43P04211 117 aa3.72□□□□□ -1.81
SYNE1-233ENST00000535896 ACYP2P14621 99 aa3.72□□□□□ -1.81
SYNE1-233ENST00000535896 LCA10Q71F78 164 aa3.71□□□□□ -1.82
SYNE1-233ENST00000535896 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.82
SYNE1-233ENST00000535896 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
SYNE1-233ENST00000535896 A0A087X002 238 aa3.7□□□□□ -1.82
SYNE1-233ENST00000535896 A6NN06 94 aa3.7□□□□□ -1.82
SYNE1-233ENST00000535896 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
SYNE1-233ENST00000535896 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
SYNE1-233ENST00000535896 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
SYNE1-233ENST00000535896 RYR1P21817 5038 aa3.67□□□□□ -1.82
SYNE1-233ENST00000535896 LINC00313P59037 77 aa3.66□□□□□ -1.82
SYNE1-233ENST00000535896 Q5W150 140 aa3.66□□□□□ -1.82
SYNE1-233ENST00000535896 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
SYNE1-233ENST00000535896 SPTSSBQ8NFR3 76 aa3.66□□□□□ -1.82
SYNE1-233ENST00000535896 RBM12B-AS1Q9P1G2 102 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms