RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 EDC4Q6P2E9 1401 aaKnown RBP-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 A0A1B0GU69 56 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 H3BQF6 201 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 LINC00032P0C843 101 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 C6orf201Q7Z4U5 140 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 DPY30Q9C005 99 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 FXYD6Q9H0Q3 95 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 AP4S1Q9Y587 144 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 ANKRD36A6QL64 1941 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 ERICH3Q5RHP9 1530 aa-0.29□□□□□ -2.46
PRKDC-205ENST00000535375 VPS8Q8N3P4 1428 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 MYO5CQ9NQX4 1742 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 CLTCQ00610 1675 aaKnown RBP-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 H0Y9P7 68 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 DEFB135Q30KP9 77 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 NCMAPQ5T1S8 102 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 URB2Q14146 1524 aaKnown RBP-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 CCDC18Q5T9S5 1454 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 LMO7Q8WWI1 1683 aa-0.3□□□□□ -2.46
PRKDC-205ENST00000535375 ABCC3O15438 1527 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 AGLP35573 1532 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 CPSF4LA6NMK7 179 aaKnown RBP-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 SYS1-DBNDD2H3BUS1 97 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 MT2AP02795 61 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 UQCRHP07919 91 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 COX8AP10176 69 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 DEFB112Q30KQ8 113 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 H1FX-AS1Q4G0G2 97 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 DEFB107AQ8IZN7 70 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 CRIPTQ9P021 101 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 APLNQ9ULZ1 77 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 CDC42BPAQ5VT25 1732 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 LRRIQ1Q96JM4 1722 aa-0.31□□□□□ -2.46
PRKDC-205ENST00000535375 RGPD2P0DJD1 1756 aa-0.32□□□□□ -2.46
PRKDC-205ENST00000535375 MT1AP04731 61 aa-0.32□□□□□ -2.46
PRKDC-205ENST00000535375 C9orf62Q8N4C0 152 aa-0.32□□□□□ -2.46
PRKDC-205ENST00000535375 MROH2BQ7Z745 1585 aa-0.32□□□□□ -2.46
PRKDC-205ENST00000535375 CCDC141Q6ZP82 1450 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 TRBV7-7A0A0K0K1E9 115 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 M0R143 59 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 ARMS2P0C7Q2 107 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 SMIM5Q71RC9 77 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 BCORQ6W2J9 1755 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 C4AP0C0L4 1744 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 C4BP0C0L5 1744 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 TRPM2O94759 1503 aa-0.33□□□□□ -2.46
PRKDC-205ENST00000535375 KIF20BQ96Q89 1820 aa-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 MROH1Q8NDA8 1641 aa-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 I3L3M4 83 aa-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 MT1BP07438 61 aa-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 TROQ12816 1431 aaPredicted RBP-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 MRPL34Q9BQ48 92 aaKnown RBP-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 ABCC6O95255 1503 aa-0.34□□□□□ -2.46
PRKDC-205ENST00000535375 CCL22O00626 93 aa-0.35□□□□□ -2.47
PRKDC-205ENST00000535375 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
PRKDC-205ENST00000535375 ABCC1P33527 1531 aa-0.35□□□□□ -2.47
PRKDC-205ENST00000535375 ATP7AQ04656 1500 aa-0.35□□□□□ -2.47
PRKDC-205ENST00000535375 CRYBG1Q9Y4K1 1723 aa-0.35□□□□□ -2.47
PRKDC-205ENST00000535375 H0YGG7 62 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 HMGN3Q15651 99 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 HIGD1BQ9P298 99 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 CDKN2A-AS1Q9UH64 79 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 CCDC180Q9P1Z9 1646 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 ABCC8Q09428 1581 aa-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 INO80Q9ULG1 1556 aaPredicted RBP-0.36□□□□□ -2.47
PRKDC-205ENST00000535375 SPTY2D1-AS1A0A0U1RR47 76 aa-0.37□□□□□ -2.47
PRKDC-205ENST00000535375 GNGT1P63211 74 aa-0.37□□□□□ -2.47
PRKDC-205ENST00000535375 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
PRKDC-205ENST00000535375 MYH4Q9Y623 1939 aa-0.37□□□□□ -2.47
PRKDC-205ENST00000535375 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
PRKDC-205ENST00000535375 C9orf92A6NGG3 77 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 H3BNG1 76 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 COL5A1-AS1Q5SY13 56 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 DEFB124Q8NES8 71 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 SNHG12Q9BXW3 62 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 PSENENQ9NZ42 101 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 ARHGAP35Q9NRY4 1499 aa-0.38□□□□□ -2.47
PRKDC-205ENST00000535375 MROH2AA6NES4 1674 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 LYNX1G3V0Z9 82 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 NDUFA3O95167 84 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 S100A8P05109 93 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 IGLC2P0DOY2 106 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 IGLC3P0DOY3 106 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 FAUP35544 74 aaKnown RBP-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 NMSQ5H8A3 153 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 COX6B2Q6YFQ2 88 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 UBE2D4Q9Y2X8 147 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 PIK3C2BO00750 1634 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 ANKRD50Q9ULJ7 1429 aa-0.39□□□□□ -2.47
PRKDC-205ENST00000535375 UQCRHLA0A096LP55 91 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 COX7BP24311 80 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 KRTAP19-5Q3LI72 72 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 ALKAL2Q6UX46 152 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 ABCA9Q8IUA7 1624 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 DUOX1Q9NRD9 1551 aa-0.4□□□□□ -2.47
PRKDC-205ENST00000535375 D6R8Y8 96 aa-0.41□□□□□ -2.48
PRKDC-205ENST00000535375 F8WEM9 126 aa-0.41□□□□□ -2.48
PRKDC-205ENST00000535375 LEPROTL1O95214 131 aa-0.41□□□□□ -2.48
PRKDC-205ENST00000535375 ETDBQ3ZM63 59 aa-0.41□□□□□ -2.48
PRKDC-205ENST00000535375 MUSTN1Q8IVN3 82 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms